Project measure / variable:   Auwerx1   epid_fat_wt_HFD

ID, description, units MPD:111399   epid_fat_wt_HFD   epididymal fat pad weight   [g]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age: 29wks
Procedure organ weights
Ontology mappings

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  STRAIN COMPARISON PLOT
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Auwerx1 - epididymal fat pad weight HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means2.2245   g
Median of the strain means2.0935   g
SD of the strain means± 0.8223
Coefficient of variation (CV)0.3697
Min–max range of strain means0.71286   –   4.7489   g
Mean sample size per strain4.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 169.5076 3.082 12.6402 < 0.0001
Residuals 187 45.5947 0.2438


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 1.25 0.33563   5 0.1501 0.2685 0.673, 1.544 -1.19
BXD100 m 3.3636 0.41993   5 0.1878 0.1248 3.0351, 4.083 1.39
BXD101 m 3.3435 0.37136   4 0.18568 0.1111 2.9892, 3.853 1.36
BXD11 m 3.4175 0.45427   4 0.22713 0.1329 2.89, 4.0 1.45
BXD12 m 1.19 0.38609   5 0.17266 0.3244 0.542, 1.552 -1.26
BXD16 m 1.451 0.24106   5 0.10781 0.1661 1.214, 1.815 -0.94
BXD2 m 2.1609 0.61517   5 0.27511 0.2847 1.192, 2.8238 -0.08
BXD27 m 1.0219 0.21925   4 0.10963 0.2146 0.807, 1.253 -1.46
BXD32 m 2.2922 0.17554   3 0.10135 0.0766 2.153, 2.4894 0.08
BXD34 m 1.7049 0.63852   5 0.28555 0.3745 1.0248, 2.4519 -0.63
BXD39 m 1.448 0.17094   5 0.07645 0.1181 1.33, 1.75 -0.94
BXD40 m 1.8814 0.71175   4 0.35588 0.3783 1.3175, 2.853 -0.42
BXD43 m 2.8957 0.63412   3 0.36611 0.219 2.3129, 3.571 0.82
BXD44 m 3.3125 0.55672   7 0.21042 0.1681 2.4165, 4.09 1.32
BXD45 m 2.0776 0.49844   4 0.24922 0.2399 1.3874, 2.4949 -0.18
BXD48 m 1.9511 0.48368   5 0.21631 0.2479 1.5084, 2.7396 -0.33
BXD48a m 2.13 0.64999   3 0.37527 0.3052 1.6617, 2.8721 -0.11
BXD49 m 3.3822 1.4797   4 0.73984 0.4375 1.7625, 4.6555 1.41
BXD50 m 2.9795 0.25184   5 0.11263 0.0845 2.5879, 3.2299 0.92
BXD51 m 3.0411 0.91771   4 0.45886 0.3018 1.6744, 3.6494 0.99
BXD53 m 2.0623 0.25454   5 0.11383 0.1234 1.873, 2.4736 -0.2
BXD55 m 1.8642 0.14141   4 0.07071 0.0759 1.7481, 2.0508 -0.44
BXD56 m 1.165 0.00516188   2   0.00365 0.0044 1.1613, 1.1686 -1.29
BXD6 m 2.065 0.42933   5 0.192 0.2079 1.538, 2.582 -0.19
BXD60 m 2.441 0.30167   5 0.13491 0.1236 2.145, 2.901 0.26
BXD61 m 4.0134 0.82981   5 0.3711 0.2068 3.4284, 5.4272 2.18
BXD62 m 2.1361 0.6466   4 0.3233 0.3027 1.3111, 2.7571 -0.11
BXD63 m 2.1254 0.26205   2   0.1853 0.1233 1.9401, 2.3107 -0.12
BXD64 m 2.4785 0.24885   4 0.12442 0.1004 2.128, 2.7128 0.31
BXD65 m 2.1733 0.22926   4 0.11463 0.1055 1.8811, 2.405 -0.06
BXD65a m 2.4975 0.40376   4 0.20188 0.1617 2.1379, 3.0626 0.33
BXD66 m 4.1902 0.59112   5 0.26436 0.1411 3.6513, 4.8294 2.39
BXD67 m 4.7489 0.83849   5 0.37499 0.1766 3.7056, 5.912 3.07
BXD68 m 1.4973 0.10331   3 0.05964 0.069 1.3785, 1.5663 -0.88
BXD69 m 0.71286 0.07679   5 0.03434 0.1077 0.6144, 0.7934 -1.84
BXD70 m 1.4059 0.10384   3 0.05995 0.0739 1.3113, 1.517 -1.0
BXD71 m 1.4167 0.18431   3 0.10641 0.1301 1.2416, 1.609 -0.98
BXD73 m 1.9227 0.30477   4 0.15238 0.1585 1.565, 2.26 -0.37
BXD73a m 1.6635 0.14739   5 0.06592 0.0886 1.5222, 1.8864 -0.68
BXD73b m 1.6133 0.11038   5 0.04936 0.0684 1.4626, 1.7631 -0.74
BXD75 m 2.1929 0.21711   5 0.09709 0.099 1.9358, 2.4712 -0.04
BXD77 m 2.242 0.19639   5 0.08783 0.0876 2.09, 2.49 0.02
BXD79 m 2.023 0.34209   5 0.15299 0.1691 1.6773, 2.5769 -0.24
BXD8 m 1.899 0.28656   5 0.12815 0.1509 1.3979, 2.0909 -0.4
BXD81 m 1.9227 0.18672   3 0.10781 0.0971 1.763, 2.128 -0.37
BXD83 m 1.5108 0.18505   4 0.09253 0.1225 1.3291, 1.7487 -0.87
BXD84 m 3.1064 0.28462   3 0.16433 0.0916 2.8378, 3.4047 1.07
BXD85 m 1.4795 0.09124   4 0.04562 0.0617 1.3588, 1.5766 -0.91
BXD87 m 2.0025 0.51565   5 0.23061 0.2575 1.1142, 2.3698 -0.27
BXD89 m 1.1991 0.14759   4 0.07379 0.1231 1.0948, 1.4136 -1.25
BXD90 m 2.1094 1.1967   4 0.59835 0.5673 0.4703, 3.3447 -0.14
BXD95 m 2.7996 0.59796   5 0.26741 0.2136 2.111, 3.519 0.7
BXD98 m 2.5042 0.39876   5 0.17833 0.1592 1.927, 2.976 0.34
BXD99 m 2.65 0.32715   5 0.14631 0.1235 2.3061, 3.1057 0.52
C57BL/6J m 1.9136 0.77376   5 0.34604 0.4043 1.0066, 2.614 -0.38
DBA/2J m 2.5275 0.19313   5 0.08637 0.0764 2.3244, 2.8136 0.37


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 1.25 0.2208265575 1.685631403 0.814368597
BXD100 m 3.36356 0.2208265575 3.799191403 2.927928597
BXD101 m 3.3435 0.2468915969 3.8305507151 2.8564492849
BXD11 m 3.4175 0.2468915969 3.9045507151 2.9304492849
BXD12 m 1.19 0.2208265575 1.625631403 0.754368597
BXD16 m 1.451 0.2208265575 1.886631403 1.015368597
BXD2 m 2.16086 0.2208265575 2.596491403 1.725228597
BXD27 m 1.021875 0.2468915969 1.5089257151 0.5348242849
BXD32 m 2.2922 0.2850858599 2.854597723 1.729802277
BXD34 m 1.7049 0.2208265575 2.140531403 1.269268597
BXD39 m 1.448 0.2208265575 1.883631403 1.012368597
BXD40 m 1.881375 0.2468915969 2.3684257151 1.3943242849
BXD43 m 2.8957333333 0.2850858599 3.4581310563 2.3333356104
BXD44 m 3.3125285714 0.1866325046 3.6807043052 2.9443528377
BXD45 m 2.077575 0.2468915969 2.5646257151 1.5905242849
BXD48 m 1.9511 0.2208265575 2.386731403 1.515468597
BXD48a m 2.13 0.2850858599 2.692397723 1.567602277
BXD49 m 3.38215 0.2468915969 3.8692007151 2.8950992849
BXD50 m 2.97948 0.2208265575 3.415111403 2.543848597
BXD51 m 3.041075 0.2468915969 3.5281257151 2.5540242849
BXD53 m 2.06234 0.2208265575 2.497971403 1.626708597
BXD55 m 1.8642 0.2468915969 2.3512507151 1.3771492849
BXD56 m 1.16495 0.3491574448 1.8537437269 0.4761562731
BXD6 m 2.065 0.2208265575 2.500631403 1.629368597
BXD60 m 2.441 0.2208265575 2.876631403 2.005368597
BXD61 m 4.01344 0.2208265575 4.449071403 3.577808597
BXD62 m 2.13615 0.2468915969 2.6232007151 1.6490992849
BXD63 m 2.1254 0.3491574448 2.8141937269 1.4366062731
BXD64 m 2.478475 0.2468915969 2.9655257151 1.9914242849
BXD65 m 2.173325 0.2468915969 2.6603757151 1.6862742849
BXD65a m 2.4975 0.2468915969 2.9845507151 2.0104492849
BXD66 m 4.19024 0.2208265575 4.625871403 3.754608597
BXD67 m 4.74888 0.2208265575 5.184511403 4.313248597
BXD68 m 1.4972666667 0.2850858599 2.0596643896 0.9348689437
BXD69 m 0.71286 0.2208265575 1.148491403 0.277228597
BXD70 m 1.4059 0.2850858599 1.968297723 0.843502277
BXD71 m 1.4166666667 0.2850858599 1.9790643896 0.8542689437
BXD73 m 1.9227 0.2468915969 2.4097507151 1.4356492849
BXD73a m 1.66352 0.2208265575 2.099151403 1.227888597
BXD73b m 1.61332 0.2208265575 2.048951403 1.177688597
BXD75 m 2.19294 0.2208265575 2.628571403 1.757308597
BXD77 m 2.242 0.2208265575 2.677631403 1.806368597
BXD79 m 2.02296 0.2208265575 2.458591403 1.587328597
BXD8 m 1.89904 0.2208265575 2.334671403 1.463408597
BXD81 m 1.9227 0.2850858599 2.485097723 1.360302277
BXD83 m 1.510775 0.2468915969 1.9978257151 1.0237242849
BXD84 m 3.1063666667 0.2850858599 3.6687643896 2.5439689437
BXD85 m 1.47955 0.2468915969 1.9666007151 0.9924992849
BXD87 m 2.00248 0.2208265575 2.438111403 1.566848597
BXD89 m 1.19915 0.2468915969 1.6862007151 0.7120992849
BXD90 m 2.109375 0.2468915969 2.5964257151 1.6223242849
BXD95 m 2.7996 0.2208265575 3.235231403 2.363968597
BXD98 m 2.5042 0.2208265575 2.939831403 2.068568597
BXD99 m 2.65 0.2208265575 3.085631403 2.214368597
C57BL/6J m 1.91362 0.2208265575 2.349251403 1.477988597
DBA/2J m 2.52752 0.2208265575 2.963151403 2.091888597




  GWAS USING LINEAR MIXED MODELS