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Project measure / variable:   Auwerx1   ftm_25wks_HFD

ID, description, units MPD:111327   ftm_25wks_HFD   fat tissue mass, 25 wks of age   [g]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   52 strains     sex: m     age: 25wks
Procedure NMR
Ontology mappings

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  STRAIN COMPARISON PLOT
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Auwerx1 - fat tissue mass, 25 wks of age HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested52 strains
Mean of the strain means16.203   g
Median of the strain means15.954   g
SD of the strain means± 6.5788
Coefficient of variation (CV)0.406
Min–max range of strain means5.0   –   35.736   g
Mean sample size per strain4.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 51 9597.2055 188.1805 11.4209 < 0.0001
Residuals 174 2866.9752 16.4769


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 7.5984 1.8797   5 0.84063 0.2474 4.41, 9.324 -1.31
BXD100 m 16.501 5.3316   5 2.3844 0.3231 8.782, 21.623 0.05
BXD101 m 18.056 4.1287   4 2.0644 0.2287 11.928, 20.552 0.28
BXD11 m 22.345 2.2679   5 1.0142 0.1015 18.701, 24.568 0.93
BXD12 m 5.8986 2.0045   5 0.89644 0.3398 2.64, 7.789 -1.57
BXD16 m 25.602 2.2242   5 0.99468 0.0869 22.782, 27.674 1.43
BXD2 m 15.335 4.9756   5 2.2252 0.3245 7.379, 21.074 -0.13
BXD27 m 10.091 4.3344   4 2.1672 0.4295 3.697, 13.052 -0.93
BXD32 m 17.379 3.5943   3 2.0752 0.2068 14.935, 21.506 0.18
BXD34 m 9.3282 3.8819   5 1.7361 0.4162 4.945, 14.165 -1.04
BXD39 m 18.491 0.619   5 0.27683 0.0335 17.886, 19.407 0.35
BXD40 m 5.0 2.3847   4 1.1923 0.4769 2.1, 7.1 -1.7
BXD43 m 7.5043 2.7364   3 1.5798 0.3646 5.692, 10.652 -1.32
BXD44 m 35.736 3.5845   4 1.7923 0.1003 31.608, 39.935 2.97
BXD48 m 21.65 4.1003   5 1.8337 0.1894 17.933, 26.159 0.83
BXD48a m 23.192 3.1318   3 1.8082 0.135 20.714, 26.712 1.06
BXD49 m 19.23 8.8353   5 3.9513 0.4595 8.521, 30.301 0.46
BXD50 m 14.758 1.9578   5 0.87556 0.1327 12.998, 17.958 -0.22
BXD53 m 12.816 3.2122   5 1.4365 0.2506 7.447, 15.271 -0.51
BXD56 m 9.045 0.03111   2   0.022 0.0034 9.023, 9.067 -1.09
BXD6 m 17.31 2.8618   5 1.2798 0.1653 13.173, 20.055 0.17
BXD60 m 27.956 1.8934   5 0.84675 0.0677 24.981, 29.733 1.79
BXD61 m 22.249 2.2756   5 1.0177 0.1023 20.101, 25.615 0.92
BXD62 m 16.14 0.37938   4 0.18969 0.0235 15.668, 16.597 -0.01
BXD63 m 13.899 2.7556   2   1.9485 0.1983 11.951, 15.848 -0.35
BXD64 m 16.66 3.0475   4 1.5237 0.1829 13.474, 19.444 0.07
BXD65 m 29.1 1.2895   4 0.64477 0.0443 28.232, 30.963 1.96
BXD65a m 20.067 4.6443   4 2.3221 0.2314 14.62, 25.31 0.59
BXD66 m 29.981 6.4051   5 2.8644 0.2136 18.604, 33.661 2.09
BXD67 m 22.677 3.8454   5 1.7197 0.1696 18.55, 27.269 0.98
BXD68 m 9.169 3.6165   4 1.8083 0.3944 4.572, 13.233 -1.07
BXD69 m 13.551 2.8358   5 1.2682 0.2093 9.073, 16.839 -0.4
BXD70 m 8.236 5.6507   4 2.8253 0.6861 2.872, 13.769 -1.21
BXD71 m 19.715 3.5667   3 2.0592 0.1809 17.006, 23.756 0.53
BXD73a m 17.833 1.4036   4 0.7018 0.0787 16.084, 18.971 0.25
BXD73b m 18.205 1.1585   5 0.51809 0.0636 16.831, 19.914 0.3
BXD75 m 13.361 4.4735   5 2.0006 0.3348 9.057, 19.16 -0.43
BXD77 m 12.432 5.2596   5 2.3522 0.4231 6.82, 19.35 -0.57
BXD79 m 17.743 1.9759   5 0.88365 0.1114 14.721, 19.751 0.23
BXD8 m 7.2632 3.3277   5 1.4882 0.4582 3.262, 11.253 -1.36
BXD81 m 19.515 1.8505   4 0.92526 0.0948 17.895, 21.972 0.5
BXD83 m 10.618 2.8964   4 1.4482 0.2728 6.46, 12.773 -0.85
BXD84 m 15.239 12.34   3 7.1243 0.8097 6.166, 29.29 -0.15
BXD85 m 20.057 2.4416   4 1.2208 0.1217 17.652, 22.933 0.59
BXD87 m 9.0915 2.8445   4 1.4222 0.3129 6.383, 12.98 -1.08
BXD89 m 10.365 1.3328   4 0.66642 0.1286 8.699, 11.921 -0.89
BXD90 m 15.767 8.2912   4 4.1456 0.5259 8.808, 25.433 -0.07
BXD95 m 15.762 7.5636   5 3.3825 0.4799 7.68, 24.017 -0.07
BXD98 m 19.739 1.8551   5 0.82964 0.094 17.171, 22.012 0.54
BXD99 m 14.279 5.1707   5 2.3124 0.3621 8.389, 20.87 -0.29
C57BL/6J m 15.296 2.7678   4 1.3839 0.1809 11.193, 17.178 -0.14
DBA/2J m 7.7004 3.3479   5 1.4972 0.4348 5.165, 13.519 -1.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 7.5984 1.8153164514 11.1812745406 4.0155254594
BXD100 m 16.5006 1.8153164514 20.0834745406 12.9177254594
BXD101 m 18.0565 2.029585493 22.0622755138 14.0507244862
BXD11 m 22.345 1.8153164514 25.9278745406 18.7621254594
BXD12 m 5.8986 1.8153164514 9.4814745406 2.3157254594
BXD16 m 25.6018 1.8153164514 29.1846745406 22.0189254594
BXD2 m 15.335 1.8153164514 18.9178745406 11.7521254594
BXD27 m 10.09125 2.029585493 14.0970255138 6.0854744862
BXD32 m 17.379 2.3435634615 22.0044711425 12.7535288575
BXD34 m 9.3282 1.8153164514 12.9110745406 5.7453254594
BXD39 m 18.4908 1.8153164514 22.0736745406 14.9079254594
BXD40 m 5.0 2.029585493 9.0057755138 0.9942244862
BXD43 m 7.5043333333 2.3435634615 12.1298044758 2.8788621909
BXD44 m 35.7365 2.029585493 39.7422755138 31.7307244862
BXD48 m 21.6498 1.8153164514 25.2326745406 18.0669254594
BXD48a m 23.192 2.3435634615 27.8174711425 18.5665288575
BXD49 m 19.2298 1.8153164514 22.8126745406 15.6469254594
BXD50 m 14.7578 1.8153164514 18.3406745406 11.1749254594
BXD53 m 12.816 1.8153164514 16.3988745406 9.2331254594
BXD56 m 9.045 2.8702673302 14.7100220595 3.3799779405
BXD6 m 17.3098 1.8153164514 20.8926745406 13.7269254594
BXD60 m 27.9556 1.8153164514 31.5384745406 24.3727254594
BXD61 m 22.2486 1.8153164514 25.8314745406 18.6657254594
BXD62 m 16.14 2.029585493 20.1457755138 12.1342244862
BXD63 m 13.8995 2.8702673302 19.5645220595 8.2344779405
BXD64 m 16.66025 2.029585493 20.6660255138 12.6544744862
BXD65 m 29.1005 2.029585493 33.1062755138 25.0947244862
BXD65a m 20.0675 2.029585493 24.0732755138 16.0617244862
BXD66 m 29.981 1.8153164514 33.5638745406 26.3981254594
BXD67 m 22.6766 1.8153164514 26.2594745406 19.0937254594
BXD68 m 9.169 2.029585493 13.1747755138 5.1632244862
BXD69 m 13.5514 1.8153164514 17.1342745406 9.9685254594
BXD70 m 8.236 2.029585493 12.2417755138 4.2302244862
BXD71 m 19.715 2.3435634615 24.3404711425 15.0895288575
BXD73a m 17.833 2.029585493 21.8387755138 13.8272244862
BXD73b m 18.2054 1.8153164514 21.7882745406 14.6225254594
BXD75 m 13.361 1.8153164514 16.9438745406 9.7781254594
BXD77 m 12.432 1.8153164514 16.0148745406 8.8491254594
BXD79 m 17.7432 1.8153164514 21.3260745406 14.1603254594
BXD8 m 7.2632 1.8153164514 10.8460745406 3.6803254594
BXD81 m 19.51475 2.029585493 23.5205255138 15.5089744862
BXD83 m 10.618 2.029585493 14.6237755138 6.6122244862
BXD84 m 15.239 2.3435634615 19.8644711425 10.6135288575
BXD85 m 20.0575 2.029585493 24.0632755138 16.0517244862
BXD87 m 9.0915 2.029585493 13.0972755138 5.0857244862
BXD89 m 10.36525 2.029585493 14.3710255138 6.3594744862
BXD90 m 15.767 2.029585493 19.7727755138 11.7612244862
BXD95 m 15.7616 1.8153164514 19.3444745406 12.1787254594
BXD98 m 19.7386 1.8153164514 23.3214745406 16.1557254594
BXD99 m 14.2792 1.8153164514 17.8620745406 10.6963254594
C57BL/6J m 15.2965 2.029585493 19.3022755138 11.2907244862
DBA/2J m 7.7004 1.8153164514 11.2832745406 4.1175254594




  GWAS USING LINEAR MIXED MODELS