Project measure / variable:   Auwerx1   dist_wheel_CD

ID, description, units MPD:111320   dist_wheel_CD   distance traveled, voluntary wheel running test, last 24h   [km]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   57 strains     sex: m     age: 23wks
Procedure running wheel monitoring
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  STRAIN COMPARISON PLOT
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Auwerx1 - distance traveled, voluntary wheel running test, last 24h CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested57 strains
Mean of the strain means3.4001   km
Median of the strain means3.1867   km
SD of the strain means± 2.1496
Coefficient of variation (CV)0.6322
Min–max range of strain means0.278   –   8.46   km
Mean sample size per strain4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 56 961.4057 17.168 4.5913 < 0.0001
Residuals 181 676.7975 3.7392


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 2.2886 1.8413   5 0.82345 0.8045 0.723, 5.29 -0.52
BXD100 m 2.8207 2.6181   3 1.5116 0.9282 0.022, 5.21 -0.27
BXD101 m 8.46 0.82024   2   0.58 0.097 7.88, 9.04 2.35
BXD11 m 1.11 0.50912   2   0.36 0.4587 0.75, 1.47 -1.07
BXD12 m 0.5378 0.36005   5 0.16102 0.6695 0.207, 1.068 -1.33
BXD16 m 0.58188 0.21192   4 0.10596 0.3642 0.273, 0.755 -1.31
BXD2 m 0.47375 0.31555   4 0.15777 0.6661 0.177, 0.917 -1.36
BXD27 m 3.942 4.8695   5 2.1777 1.2353 1.25, 12.61 0.25
BXD32 m 1.8558 1.0606   5 0.47432 0.5715 1.04, 3.34 -0.72
BXD34 m 5.2725 0.84128   4 0.42064 0.1596 4.63, 6.43 0.87
BXD39 m 0.618 0.26603   5 0.11897 0.4305 0.21, 0.86 -1.29
BXD40 m 6.0867 1.0671   3 0.61607 0.1753 5.06, 7.19 1.25
BXD43 m 8.3067 3.5669   3 2.0593 0.4294 4.36, 11.3 2.28
BXD44 m 4.3367 2.2312   9 0.74372 0.5145 1.41, 6.78 0.44
BXD45 m 5.1079 0.92546   4 0.46273 0.1812 3.9, 6.0378 0.79
BXD48 m 3.0462 2.2303   5 0.99742 0.7322 0.72798, 5.555 -0.16
BXD48a m 3.475 2.991   4 1.4955 0.8607 0.85, 7.78 0.03
BXD49 m 0.65795 0.16396   4 0.08198 0.2492 0.4653, 0.8457 -1.28
BXD50 m 2.0753 0.84152   4 0.42076 0.4055 0.951, 2.75 -0.62
BXD51 m 5.0758 1.2624   4 0.63118 0.2487 3.5456, 6.4066 0.78
BXD53 m 3.34 1.8441   5 0.82469 0.5521 0.47, 5.09 -0.03
BXD55 m 4.1012 1.873   5 0.83763 0.4567 2.1233, 6.2359 0.33
BXD56 m 5.449 1.4762   3 0.85227 0.2709 4.015, 6.964 0.95
BXD6 m 3.2008 2.6347   5 1.1783 0.8231 0.284, 6.99 -0.09
BXD60 m 1.5429 1.0974   4 0.54871 0.7112 0.5878, 3.113 -0.86
BXD61 m 3.1867 3.1082   3 1.7945 0.9754 1.22, 6.77 -0.1
BXD62 m 2.665 2.2424   4 1.1212 0.8414 0.51, 5.34 -0.34
BXD63 m 2.18 0.62086   4 0.31043 0.2848 1.43, 2.71 -0.57
BXD64 m 3.8826 3.0076   4 1.5038 0.7746 0.6156, 7.721 0.22
BXD65 m 0.8535 0.50096   4 0.25048 0.587 0.482, 1.59 -1.18
BXD65a m 3.9066 1.9539   5 0.87383 0.5002 0.84, 6.058 0.24
BXD65b m 1.4552 0.51431   4 0.25716 0.3534 0.781, 2.0 -0.9
BXD66 m 0.278 0.18404   5 0.0823 0.662 0.07, 0.53 -1.45
BXD67 m 1.8832 1.4296   5 0.63933 0.7591 0.669, 4.14 -0.71
BXD68 m 7.3787 3.9338   3 2.2712 0.5331 3.473, 11.34 1.85
BXD69 m 3.362 1.1843   5 0.52963 0.3523 2.1, 5.18 -0.02
BXD70 m 4.2289 1.2255   4 0.61273 0.2898 2.9557, 5.5172 0.39
BXD71 m 5.8087 1.6114   4 0.8057 0.2774 3.4466, 7.005 1.12
BXD73 m 1.8 1.4688   4 0.73438 0.816 0.0025, 3.6002 -0.74
BXD73a m 1.0525 0.49271   4 0.24635 0.4681 0.72, 1.77 -1.09
BXD73b m 2.6786 2.7214   5 1.217 1.016 0.237, 6.78 -0.34
BXD75 m 4.3854 2.4488   5 1.0951 0.5584 0.927, 7.1 0.46
BXD77 m 2.666 1.4099   5 0.63054 0.5289 0.79, 4.56 -0.34
BXD79 m 0.8726 0.35893   5 0.16052 0.4113 0.518, 1.351 -1.18
BXD8 m 3.0 2.5729   4 1.2864 0.8576 0.27, 5.96 -0.19
BXD81 m 6.6849 2.0816   4 1.0408 0.3114 3.733, 8.341 1.53
BXD83 m 1.747 1.5295   3 0.88304 0.8755 0.001, 2.85 -0.77
BXD84 m 7.1215 4.1185   4 2.0593 0.5783 1.176, 10.14 1.73
BXD85 m 1.4377 1.4568   4 0.7284 1.0133 0.3651, 3.584 -0.91
BXD87 m 1.18 0.34477   4 0.17239 0.2922 0.73, 1.57 -1.03
BXD89 m 6.095 0.33252   4 0.16626 0.0546 5.62, 6.33 1.25
BXD90 m 3.275 1.6457   4 0.82287 0.5025 1.65, 5.38 -0.06
BXD95 m 2.8025 0.99794   4 0.49897 0.3561 1.34, 3.56 -0.28
BXD98 m 5.221 1.9566   4 0.97828 0.3747 3.38, 7.554 0.85
BXD99 m 6.423 1.6201   4 0.81004 0.2522 4.117, 7.696 1.41
C57BL/6J m 6.8775 1.5219   4 0.76096 0.2213 5.61, 9.09 1.62
DBA/2J m 3.6533 3.148   3 1.8175 0.8617 0.93, 7.1 0.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 2.2886 0.8647789025 3.9949445813 0.5822554187
BXD100 m 2.8206666667 1.1164247625 5.0235480488 0.6177852845
BXD101 m 8.46 1.3673355022 11.1579676751 5.7620323249
BXD11 m 1.11 1.3673355022 3.8079676751 -1.5879676751
BXD12 m 0.5378 0.8647789025 2.2441445813 -1.1685445813
BXD16 m 0.581875 0.9668522057 2.4896262385 -1.3258762385
BXD2 m 0.47375 0.9668522057 2.3815012385 -1.4340012385
BXD27 m 3.942 0.8647789025 5.6483445813 2.2356554187
BXD32 m 1.8558 0.8647789025 3.5621445813 0.1494554187
BXD34 m 5.2725 0.9668522057 7.1802512385 3.3647487615
BXD39 m 0.618 0.8647789025 2.3243445813 -1.0883445813
BXD40 m 6.0866666667 1.1164247625 8.2895480488 3.8837852845
BXD43 m 8.3066666667 1.1164247625 10.5095480488 6.1037852845
BXD44 m 4.3366666667 0.6445681372 5.6085008256 3.0648325077
BXD45 m 5.10785 0.9668522057 7.0156012385 3.2000987615
BXD48 m 3.046216 0.8647789025 4.7525605813 1.3398714187
BXD48a m 3.475 0.9668522057 5.3827512385 1.5672487615
BXD49 m 0.65795 0.9668522057 2.5657012385 -1.2498012385
BXD50 m 2.07525 0.9668522057 3.9830012385 0.1674987615
BXD51 m 5.0758 0.9668522057 6.9835512385 3.1680487615
BXD53 m 3.34 0.8647789025 5.0463445813 1.6336554187
BXD55 m 4.10118 0.8647789025 5.8075245813 2.3948354187
BXD56 m 5.449 1.1164247625 7.6518813821 3.2461186179
BXD6 m 3.2008 0.8647789025 4.9071445813 1.4944554187
BXD60 m 1.54295 0.9668522057 3.4507012385 -0.3648012385
BXD61 m 3.1866666667 1.1164247625 5.3895480488 0.9837852845
BXD62 m 2.665 0.9668522057 4.5727512385 0.7572487615
BXD63 m 2.18 0.9668522057 4.0877512385 0.2722487615
BXD64 m 3.88265 0.9668522057 5.7904012385 1.9748987615
BXD65 m 0.8535 0.9668522057 2.7612512385 -1.0542512385
BXD65a m 3.9066 0.8647789025 5.6129445813 2.2002554187
BXD65b m 1.45525 0.9668522057 3.3630012385 -0.4525012385
BXD66 m 0.278 0.8647789025 1.9843445813 -1.4283445813
BXD67 m 1.8832 0.8647789025 3.5895445813 0.1768554187
BXD68 m 7.3786666667 1.1164247625 9.5815480488 5.1757852845
BXD69 m 3.362 0.8647789025 5.0683445813 1.6556554187
BXD70 m 4.2289 0.9668522057 6.1366512385 2.3211487615
BXD71 m 5.80865 0.9668522057 7.7164012385 3.9008987615
BXD73 m 1.8 0.9668522057 3.7077512385 -0.1077512385
BXD73a m 1.0525 0.9668522057 2.9602512385 -0.8552512385
BXD73b m 2.6786 0.8647789025 4.3849445813 0.9722554187
BXD75 m 4.3854 0.8647789025 6.0917445813 2.6790554187
BXD77 m 2.666 0.8647789025 4.3723445813 0.9596554187
BXD79 m 0.8726 0.8647789025 2.5789445813 -0.8337445813
BXD8 m 3.0 0.9668522057 4.9077512385 1.0922487615
BXD81 m 6.6849 0.9668522057 8.5926512385 4.7771487615
BXD83 m 1.747 1.1164247625 3.9498813821 -0.4558813821
BXD84 m 7.1215 0.9668522057 9.0292512385 5.2137487615
BXD85 m 1.4377 0.9668522057 3.3454512385 -0.4700512385
BXD87 m 1.18 0.9668522057 3.0877512385 -0.7277512385
BXD89 m 6.095 0.9668522057 8.0027512385 4.1872487615
BXD90 m 3.275 0.9668522057 5.1827512385 1.3672487615
BXD95 m 2.8025 0.9668522057 4.7102512385 0.8947487615
BXD98 m 5.221 0.9668522057 7.1287512385 3.3132487615
BXD99 m 6.423 0.9668522057 8.3307512385 4.5152487615
C57BL/6J m 6.8775 0.9668522057 8.7852512385 4.9697487615
DBA/2J m 3.6533333333 1.1164247625 5.8562147155 1.4504519512




  GWAS USING LINEAR MIXED MODELS