Project measure / variable:   Auwerx1   dist_treadmill1_HFD

ID, description, units MPD:111317   dist_treadmill1_HFD   distance traveled, first treadmill training   [m]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age: 23wks
Procedure treadmill endurance test
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  STRAIN COMPARISON PLOT
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Auwerx1 - distance traveled, first treadmill training HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means237.7   m
Median of the strain means211.1   m
SD of the strain means± 142.6
Coefficient of variation (CV)0.5999
Min–max range of strain means38.0   –   759.7   m
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 4765453.9987 86644.6182 12.5088 < 0.0001
Residuals 191 1322997.8556 6926.6903


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 138.4 67.33   5 30.111 0.4865 74.0, 220.0 -0.7
BXD100 m 440.6 160.4   5 71.72 0.364 266.0, 695.0 1.42
BXD101 m 244.8 68.22   4 34.111 0.2787 198.0, 346.0 0.05
BXD11 m 302.4 159.2   5 71.2 0.5265 197.0, 584.0 0.45
BXD12 m 354.4 74.18   5 33.173 0.2093 251.0, 427.0 0.82
BXD16 m 154.2 28.066   5 12.551 0.182 113.0, 188.0 -0.59
BXD2 m 199.0 57.41   5 25.673 0.2885 135.0, 276.0 -0.27
BXD27 m 191.5 94.47   4 47.234 0.4933 122.0, 327.0 -0.32
BXD32 m 209.7 102.9   3 59.43 0.4909 122.0, 323.0 -0.2
BXD34 m 234.2 157.8   5 70.56 0.6737 101.0, 457.0 -0.02
BXD39 m 127.8 62.84   5 28.102 0.4917 71.0, 208.0 -0.77
BXD40 m 451.0 137.4   4 68.71 0.3047 295.0, 614.0 1.5
BXD43 m 759.7 72.04   3 41.591 0.0948 677.0, 809.0 3.66
BXD44 m 91.78 19.791   9 6.5971 0.2156 65.0, 132.0 -1.02
BXD45 m 501.5 148.8   4 74.39 0.2967 338.0, 698.0 1.85
BXD48 m 234.5 24.933   4 12.467 0.1063 215.0, 268.0 -0.02
BXD48a m 96.33 53.68   3 30.991 0.5572 55.0, 157.0 -0.99
BXD49 m 85.0 51.89   5 23.208 0.6105 40.0, 170.0 -1.07
BXD50 m 106.0 47.165   5 21.093 0.4449 45.0, 160.0 -0.92
BXD51 m 136.5 22.884   4 11.442 0.1676 108.0, 156.0 -0.71
BXD53 m 111.6 21.303   5 9.5268 0.1909 82.0, 133.0 -0.88
BXD55 m 212.5 103.3   4 51.65 0.4861 87.0, 335.0 -0.18
BXD56 m 170.3 62.13   3 35.872 0.3648 118.0, 239.0 -0.47
BXD6 m 226.8 26.461   5 11.834 0.1167 203.0, 270.0 -0.08
BXD60 m 89.2 15.369   5 6.8731 0.1723 69.0, 107.0 -1.04
BXD61 m 154.8 58.26   5 26.053 0.3763 82.0, 245.0 -0.58
BXD62 m 224.0 71.66   4 35.828 0.3199 143.0, 315.0 -0.1
BXD63 m 276.0 16.971   2   12.0 0.0615 264.0, 288.0 0.27
BXD64 m 130.8 84.89   4 42.443 0.6492 65.0, 254.0 -0.75
BXD65 m 101.2 21.639   4 10.82 0.2137 77.0, 128.0 -0.96
BXD65a m 85.75 49.446   4 24.723 0.5766 43.0, 145.0 -1.07
BXD66 m 38.0 14.714   5 6.5803 0.3872 14.0, 50.0 -1.4
BXD67 m 88.2 46.029   5 20.585 0.5219 25.0, 135.0 -1.05
BXD68 m 376.8 127.3   4 63.64 0.3378 214.0, 512.0 0.98
BXD69 m 593.4 101.3   5 45.285 0.1706 494.0, 714.0 2.49
BXD70 m 332.2 54.96   4 27.481 0.1654 295.0, 414.0 0.66
BXD71 m 201.3 40.772   3 23.54 0.2025 156.0, 235.0 -0.26
BXD73 m 403.0 118.6   4 59.29 0.2943 293.0, 566.0 1.16
BXD73a m 124.0 33.096   4 16.548 0.2669 96.0, 171.0 -0.8
BXD73b m 216.2 38.16   5 17.066 0.1765 161.0, 266.0 -0.15
BXD75 m 395.2 102.5   5 45.836 0.2593 292.0, 532.0 1.1
BXD77 m 337.0 68.02   5 30.419 0.2018 258.0, 440.0 0.7
BXD79 m 88.8 48.536   5 21.706 0.5466 35.0, 168.0 -1.04
BXD8 m 416.2 151.6   5 67.78 0.3642 248.0, 643.0 1.25
BXD81 m 219.8 46.793   4 23.396 0.2129 160.0, 274.0 -0.13
BXD83 m 168.2 146.9   4 73.47 0.8733 43.0, 379.0 -0.49
BXD84 m 207.3 68.31   3 39.439 0.3295 163.0, 286.0 -0.21
BXD85 m 76.5 12.069   4 6.0346 0.1578 60.0, 89.0 -1.13
BXD87 m 251.2 95.43   4 47.717 0.3798 172.0, 370.0 0.09
BXD89 m 359.5 135.4   4 67.72 0.3768 187.0, 473.0 0.85
BXD90 m 165.5 44.215   4 22.108 0.2672 105.0, 206.0 -0.51
BXD95 m 213.6 86.64   5 38.746 0.4056 130.0, 325.0 -0.17
BXD98 m 207.0 60.02   5 26.844 0.29 110.0, 264.0 -0.22
BXD99 m 358.8 58.77   5 26.282 0.1638 280.0, 436.0 0.85
C57BL/6J m 236.2 82.4   4 41.199 0.3488 137.0, 338.0 -0.01
DBA/2J m 395.8 102.7   5 45.922 0.2594 274.0, 495.0 1.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 138.4 37.2201298848 211.815291452 64.9847085479
BXD100 m 440.6 37.2201298848 514.0152914521 367.184708548
BXD101 m 244.75 41.6133702769 326.8307911374 162.6692088626
BXD11 m 302.4 37.2201298848 375.8152914521 228.9847085479
BXD12 m 354.4 37.2201298848 427.8152914521 280.9847085479
BXD16 m 154.2 37.2201298848 227.6152914521 80.7847085479
BXD2 m 199.0 37.2201298848 272.4152914521 125.584708548
BXD27 m 191.5 41.6133702769 273.5807911374 109.4192088626
BXD32 m 209.6666666667 48.0509810626 304.4454003836 114.8879329497
BXD34 m 234.2 37.2201298848 307.6152914521 160.7847085479
BXD39 m 127.8 37.2201298848 201.2152914521 54.384708548
BXD40 m 451.0 41.6133702769 533.0807911374 368.9192088626
BXD43 m 759.6666666667 48.0509810626 854.4454003836 664.8879329497
BXD44 m 91.7777777778 27.7422468513 146.4983052027 37.0572503529
BXD45 m 501.5 41.6133702769 583.5807911374 419.4192088626
BXD48 m 234.5 41.6133702769 316.5807911374 152.4192088626
BXD48a m 96.3333333333 48.0509810626 191.1120670503 1.5545996164
BXD49 m 85.0 37.2201298848 158.4152914521 11.5847085479
BXD50 m 106.0 37.2201298848 179.4152914521 32.5847085479
BXD51 m 136.5 41.6133702769 218.5807911374 54.4192088626
BXD53 m 111.6 37.2201298848 185.015291452 38.1847085479
BXD55 m 212.5 41.6133702769 294.5807911374 130.4192088626
BXD56 m 170.3333333333 48.0509810626 265.1120670503 75.5545996164
BXD6 m 226.8 37.2201298848 300.2152914521 153.3847085479
BXD60 m 89.2 37.2201298848 162.615291452 15.7847085479
BXD61 m 154.8 37.2201298848 228.2152914521 81.3847085479
BXD62 m 224.0 41.6133702769 306.0807911374 141.9192088626
BXD63 m 276.0 58.8501926217 392.0797680368 159.9202319632
BXD64 m 130.75 41.6133702769 212.8307911374 48.6692088626
BXD65 m 101.25 41.6133702769 183.3307911374 19.1692088626
BXD65a m 85.75 41.6133702769 167.8307911374 3.6692088626
BXD66 m 38.0 37.2201298848 111.4152914521 -35.415291452
BXD67 m 88.2 37.2201298848 161.6152914521 14.7847085479
BXD68 m 376.75 41.6133702769 458.8307911374 294.6692088626
BXD69 m 593.4 37.2201298848 666.8152914521 519.9847085479
BXD70 m 332.25 41.6133702769 414.3307911374 250.1692088626
BXD71 m 201.3333333333 48.0509810626 296.1120670503 106.5545996164
BXD73 m 403.0 41.6133702769 485.0807911374 320.9192088626
BXD73a m 124.0 41.6133702769 206.0807911374 41.9192088626
BXD73b m 216.2 37.2201298848 289.6152914521 142.7847085479
BXD75 m 395.2 37.2201298848 468.6152914521 321.7847085479
BXD77 m 337.0 37.2201298848 410.4152914521 263.5847085479
BXD79 m 88.8 37.2201298848 162.2152914521 15.3847085479
BXD8 m 416.2 37.2201298848 489.6152914521 342.7847085479
BXD81 m 219.75 41.6133702769 301.8307911374 137.6692088626
BXD83 m 168.25 41.6133702769 250.3307911374 86.1692088626
BXD84 m 207.3333333333 48.0509810626 302.1120670503 112.5545996164
BXD85 m 76.5 41.6133702769 158.5807911374 -5.5807911374
BXD87 m 251.25 41.6133702769 333.3307911374 169.1692088626
BXD89 m 359.5 41.6133702769 441.5807911374 277.4192088626
BXD90 m 165.5 41.6133702769 247.5807911374 83.4192088626
BXD95 m 213.6 37.2201298848 287.0152914521 140.1847085479
BXD98 m 207.0 37.2201298848 280.4152914521 133.5847085479
BXD99 m 358.8 37.2201298848 432.2152914521 285.3847085479
C57BL/6J m 236.25 41.6133702769 318.3307911374 154.1692088626
DBA/2J m 395.8 37.2201298848 469.2152914521 322.3847085479




  GWAS USING LINEAR MIXED MODELS