Project measure / variable:   Auwerx1   food_intake_23wks_CD

ID, description, units MPD:111302   food_intake_23wks_CD   daily food intake, basal activity test, for 2 days, 23 wks of age   [g/day]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   57 strains     sex: m     age: 23wks
Procedure intake monitoring
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  STRAIN COMPARISON PLOT
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Auwerx1 - daily food intake, basal activity test, for 2 days, 23 wks of age CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested57 strains
Mean of the strain means3.7827   g/day
Median of the strain means3.7325   g/day
SD of the strain means± 0.96085
Coefficient of variation (CV)0.254
Min–max range of strain means1.656   –   5.838   g/day
Mean sample size per strain4.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 56 219.4446 3.9187 8.8724 < 0.0001
Residuals 187 82.5917 0.4417


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 3.312 0.46197   5 0.2066 0.1395 2.73, 3.67 -0.49
BXD100 m 5.34 0.18682   3 0.10786 0.035 5.17, 5.54 1.62
BXD101 m 2.1825 0.33079   4 0.1654 0.1516 1.73, 2.51 -1.67
BXD11 m 4.065 0.0495   2   0.035 0.0122 4.03, 4.1 0.29
BXD12 m 3.448 0.77674   5 0.34737 0.2253 2.5, 4.33 -0.35
BXD16 m 4.985 0.21486   4 0.10743 0.0431 4.77, 5.24 1.25
BXD2 m 3.505 0.15864   4 0.07932 0.0453 3.37, 3.71 -0.29
BXD27 m 4.866 1.1097   5 0.49627 0.2281 3.17, 5.78 1.13
BXD32 m 4.168 0.78395   5 0.35059 0.1881 3.38, 5.07 0.4
BXD34 m 4.76 1.1308   4 0.56541 0.2376 3.52, 6.21 1.02
BXD39 m 3.896 0.26216   5 0.11724 0.0673 3.5, 4.15 0.12
BXD40 m 4.62 0.31113   2   0.22 0.0673 4.4, 4.84 0.87
BXD43 m 4.4867 0.08021   3 0.04631 0.0179 4.41, 4.57 0.73
BXD44 m 3.1189 0.51823   9 0.17274 0.1662 2.34, 3.88 -0.69
BXD45 m 5.82 0.48146   4 0.24073 0.0827 5.1, 6.11 2.12
BXD48 m 1.656 0.55626   5 0.24877 0.3359 1.0, 2.49 -2.21
BXD48a m 4.2775 0.34596   4 0.17298 0.0809 4.05, 4.79 0.51
BXD49 m 3.705 0.61343   4 0.30672 0.1656 3.1, 4.54 -0.08
BXD50 m 3.0 0.80998   4 0.40499 0.27 2.32, 4.16 -0.81
BXD51 m 4.69 0.58515   4 0.29257 0.1248 3.93, 5.17 0.94
BXD53 m 4.362 0.58819   5 0.26305 0.1348 3.67, 4.84 0.6
BXD55 m 3.752 0.34579   5 0.15464 0.0922 3.3, 4.13 -0.03
BXD56 m 3.8625 2.2577   4 1.1289 0.5845 0.57, 5.7 0.08
BXD6 m 2.364 0.92789   5 0.41497 0.3925 1.49, 3.93 -1.48
BXD60 m 4.73 0.51546   5 0.23052 0.109 4.17, 5.54 0.99
BXD61 m 5.0733 0.72507   3 0.41862 0.1429 4.24, 5.56 1.34
BXD62 m 4.0825 1.0066   4 0.50331 0.2466 2.7, 5.11 0.31
BXD63 m 3.025 0.93931   4 0.46965 0.3105 1.96, 4.17 -0.79
BXD64 m 3.7325 0.5391   4 0.26955 0.1444 3.15, 4.44 -0.05
BXD65 m 4.59 0.54851   4 0.27426 0.1195 3.98, 5.16 0.84
BXD65a m 4.542 0.16438   5 0.07351 0.0362 4.28, 4.7 0.79
BXD65b m 4.5325 0.55596   4 0.27798 0.1227 3.74, 4.99 0.78
BXD66 m 5.838 0.56597   5 0.25311 0.0969 4.96, 6.45 2.14
BXD67 m 3.384 0.43615   5 0.19505 0.1289 2.71, 3.88 -0.41
BXD68 m 4.51 0.93338   2   0.66 0.207 3.85, 5.17 0.76
BXD69 m 3.266 0.46387   5 0.20745 0.142 2.69, 3.98 -0.54
BXD70 m 4.4875 0.38621   4 0.19311 0.0861 4.02, 4.89 0.73
BXD71 m 2.678 0.95565   5 0.42738 0.3569 1.05, 3.38 -1.15
BXD73 m 2.7425 0.1258   4 0.0629 0.0459 2.61, 2.91 -1.08
BXD73a m 2.916 0.49425   5 0.22103 0.1695 2.17, 3.39 -0.9
BXD73b m 2.98 0.39856   5 0.17824 0.1337 2.56, 3.41 -0.84
BXD75 m 3.044 0.57769   5 0.25835 0.1898 2.1, 3.5 -0.77
BXD77 m 2.91 0.45365   5 0.20288 0.1559 2.12, 3.18 -0.91
BXD79 m 3.642 0.30466   5 0.13625 0.0837 3.36, 4.06 -0.15
BXD8 m 4.845 0.23473   4 0.11737 0.0484 4.52, 5.07 1.11
BXD81 m 1.67 0.67936   4 0.33968 0.4068 0.79, 2.44 -2.2
BXD83 m 3.64 0.14799   3 0.08544 0.0407 3.47, 3.74 -0.15
BXD84 m 2.71 0.75899   4 0.3795 0.2801 1.66, 3.47 -1.12
BXD85 m 3.544 0.64376   5 0.2879 0.1816 2.52, 4.21 -0.25
BXD87 m 3.6575 0.43554   4 0.21777 0.1191 3.26, 4.11 -0.13
BXD89 m 3.05 0.34823   4 0.17412 0.1142 2.78, 3.55 -0.76
BXD90 m 3.2 0.46812   4 0.23406 0.1463 2.65, 3.72 -0.61
BXD95 m 2.335 1.0622   4 0.53112 0.4549 1.33, 3.79 -1.51
BXD98 m 3.9925 0.30999   4 0.15499 0.0776 3.62, 4.36 0.22
BXD99 m 2.746 0.80949   5 0.36202 0.2948 1.92, 4.07 -1.08
C57BL/6J m 4.5175 0.87164   4 0.43582 0.1929 3.98, 5.82 0.76
DBA/2J m 4.7567 0.24906   3 0.1438 0.0524 4.47, 4.92 1.01


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 3.312 0.2972092727 3.8983139556 2.7256860444
BXD100 m 5.34 0.3836955211 6.0969280619 4.5830719381
BXD101 m 2.1825 0.3322900686 2.8380189304 1.5269810696
BXD11 m 4.065 0.4699291217 4.9920437618 3.1379562382
BXD12 m 3.448 0.2972092727 4.0343139556 2.8616860444
BXD16 m 4.985 0.3322900686 5.6405189304 4.3294810696
BXD2 m 3.505 0.3322900686 4.1605189304 2.8494810696
BXD27 m 4.866 0.2972092727 5.4523139556 4.2796860444
BXD32 m 4.168 0.2972092727 4.7543139556 3.5816860444
BXD34 m 4.76 0.3322900686 5.4155189304 4.1044810696
BXD39 m 3.896 0.2972092727 4.4823139556 3.3096860444
BXD40 m 4.62 0.4699291217 5.5470437618 3.6929562382
BXD43 m 4.4866666667 0.3836955211 5.2435947285 3.7297386048
BXD44 m 3.1188888889 0.2215267124 3.5559015092 2.6818762686
BXD45 m 5.82 0.3322900686 6.4755189304 5.1644810696
BXD48 m 1.656 0.2972092727 2.2423139556 1.0696860444
BXD48a m 4.2775 0.3322900686 4.9330189304 3.6219810696
BXD49 m 3.705 0.3322900686 4.3605189304 3.0494810696
BXD50 m 3.0 0.3322900686 3.6555189304 2.3444810696
BXD51 m 4.69 0.3322900686 5.3455189304 4.0344810696
BXD53 m 4.362 0.2972092727 4.9483139556 3.7756860444
BXD55 m 3.752 0.2972092727 4.3383139556 3.1656860444
BXD56 m 3.8625 0.3322900686 4.5180189304 3.2069810696
BXD6 m 2.364 0.2972092727 2.9503139556 1.7776860444
BXD60 m 4.73 0.2972092727 5.3163139556 4.1436860444
BXD61 m 5.0733333333 0.3836955211 5.8302613952 4.3164052715
BXD62 m 4.0825 0.3322900686 4.7380189304 3.4269810696
BXD63 m 3.025 0.3322900686 3.6805189304 2.3694810696
BXD64 m 3.7325 0.3322900686 4.3880189304 3.0769810696
BXD65 m 4.59 0.3322900686 5.2455189304 3.9344810696
BXD65a m 4.542 0.2972092727 5.1283139556 3.9556860444
BXD65b m 4.5325 0.3322900686 5.1880189304 3.8769810696
BXD66 m 5.838 0.2972092727 6.4243139556 5.2516860444
BXD67 m 3.384 0.2972092727 3.9703139556 2.7976860444
BXD68 m 4.51 0.4699291217 5.4370437618 3.5829562382
BXD69 m 3.266 0.2972092727 3.8523139556 2.6796860444
BXD70 m 4.4875 0.3322900686 5.1430189304 3.8319810696
BXD71 m 2.678 0.2972092727 3.2643139556 2.0916860444
BXD73 m 2.7425 0.3322900686 3.3980189304 2.0869810696
BXD73a m 2.916 0.2972092727 3.5023139556 2.3296860444
BXD73b m 2.98 0.2972092727 3.5663139556 2.3936860444
BXD75 m 3.044 0.2972092727 3.6303139556 2.4576860444
BXD77 m 2.91 0.2972092727 3.4963139556 2.3236860444
BXD79 m 3.642 0.2972092727 4.2283139556 3.0556860444
BXD8 m 4.845 0.3322900686 5.5005189304 4.1894810696
BXD81 m 1.67 0.3322900686 2.3255189304 1.0144810696
BXD83 m 3.64 0.3836955211 4.3969280619 2.8830719381
BXD84 m 2.71 0.3322900686 3.3655189304 2.0544810696
BXD85 m 3.544 0.2972092727 4.1303139556 2.9576860444
BXD87 m 3.6575 0.3322900686 4.3130189304 3.0019810696
BXD89 m 3.05 0.3322900686 3.7055189304 2.3944810696
BXD90 m 3.2 0.3322900686 3.8555189304 2.5444810696
BXD95 m 2.335 0.3322900686 2.9905189304 1.6794810696
BXD98 m 3.9925 0.3322900686 4.6480189304 3.3369810696
BXD99 m 2.746 0.2972092727 3.3323139556 2.1596860444
C57BL/6J m 4.5175 0.3322900686 5.1730189304 3.8619810696
DBA/2J m 4.7566666667 0.3836955211 5.5135947285 3.9997386048




  GWAS USING LINEAR MIXED MODELS