Project measure / variable:   Auwerx1   temp_t1_HFD

ID, description, units MPD:111285   temp_t1_HFD   body temperature (rectal) in cold (4°C) room, 1h exposed to cold   [°C]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   56 strains     sex: m     age: 21wks
Procedure body temperature
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  STRAIN COMPARISON PLOT
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Auwerx1 - body temperature (rectal) in cold (4°C) room, 1h exposed to cold HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested56 strains
Mean of the strain means35.916   °C
Median of the strain means35.927   °C
SD of the strain means± 0.89587
Coefficient of variation (CV)0.0249
Min–max range of strain means33.425   –   37.42   °C
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 183.6249 3.3386 9.3502 < 0.0001
Residuals 196 69.9851 0.3571


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 36.44 0.39115   5 0.17493 0.0107 35.8, 36.8 0.59
BXD100 m 37.04 0.70569   5 0.31559 0.0191 36.4, 37.9 1.25
BXD101 m 35.7 0.52915   4 0.26458 0.0148 35.2, 36.4 -0.24
BXD11 m 36.18 0.46043   5 0.20591 0.0127 35.5, 36.8 0.29
BXD12 m 37.28 0.7225   5 0.32311 0.0194 36.5, 38.4 1.52
BXD16 m 36.0 0.47434   5 0.21213 0.0132 35.2, 36.4 0.09
BXD2 m 36.64 0.43932   5 0.19647 0.012 36.2, 37.3 0.81
BXD27 m 33.425 0.5058   4 0.2529 0.0151 32.8, 34.0 -2.78
BXD32 m 36.167 0.15275   3 0.08819 0.0042 36.0, 36.3 0.28
BXD34 m 35.36 0.46152   5 0.2064 0.0131 34.6, 35.8 -0.62
BXD39 m 35.7 0.33912   5 0.15166 0.0095 35.2, 36.1 -0.24
BXD40 m 35.775 1.3913   4 0.69567 0.0389 33.8, 36.8 -0.16
BXD43 m 36.267 1.0066   3 0.58119 0.0278 35.2, 37.2 0.39
BXD44 m 35.811 0.26194   9 0.08731 0.0073 35.5, 36.3 -0.12
BXD45 m 36.52 0.25884   5 0.11576 0.0071 36.2, 36.8 0.67
BXD48 m 35.56 0.32863   5 0.14697 0.0092 35.2, 36.0 -0.4
BXD48a m 35.933 0.15275   3 0.08819 0.0043 35.8, 36.1 0.02
BXD49 m 35.34 0.38471   5 0.17205 0.0109 34.8, 35.8 -0.64
BXD50 m 35.68 1.0257   5 0.45869 0.0287 34.5, 37.1 -0.26
BXD51 m 35.4 0.53541   4 0.26771 0.0151 34.6, 35.7 -0.58
BXD53 m 35.88 0.50695   5 0.22672 0.0141 35.2, 36.4 -0.04
BXD55 m 37.025 0.34034   4 0.17017 0.0092 36.6, 37.3 1.24
BXD56 m 37.1 0.52915   3 0.30551 0.0143 36.5, 37.5 1.32
BXD6 m 36.14 0.75033   5 0.33556 0.0208 35.1, 37.1 0.25
BXD60 m 34.85 0.41231   4 0.20616 0.0118 34.4, 35.4 -1.19
BXD61 m 36.42 0.75299   5 0.33675 0.0207 35.4, 37.3 0.56
BXD62 m 36.275 0.09574   4 0.04787 0.0026 36.2, 36.4 0.4
BXD63 m 33.6 1.9799   2   1.4 0.0589 32.2, 35.0 -2.58
BXD64 m 34.625 0.65511   4 0.32755 0.0189 34.2, 35.6 -1.44
BXD65 m 36.025 0.38622   4 0.19311 0.0107 35.5, 36.4 0.12
BXD65a m 34.725 0.77621   4 0.3881 0.0224 33.7, 35.5 -1.33
BXD66 m 35.6 0.70356   5 0.31464 0.0198 34.7, 36.2 -0.35
BXD67 m 35.78 0.42071   5 0.18815 0.0118 35.1, 36.2 -0.15
BXD68 m 35.4 0.66833   4 0.33417 0.0189 34.5, 36.0 -0.58
BXD69 m 33.8 0.43589   5 0.19494 0.0129 33.3, 34.3 -2.36
BXD70 m 36.95 0.89629   4 0.44814 0.0243 35.8, 37.8 1.15
BXD71 m 35.033 1.159   3 0.66916 0.0331 33.8, 36.1 -0.99
BXD73 m 35.56 0.67305   5 0.301 0.0189 34.6, 36.3 -0.4
BXD73a m 37.22 0.52154   5 0.23324 0.014 36.4, 37.8 1.46
BXD73b m 35.92 0.29496   5 0.13191 0.0082 35.4, 36.1 0.0
BXD75 m 37.42 0.27749   5 0.1241 0.0074 37.1, 37.8 1.68
BXD77 m 35.78 0.65727   5 0.29394 0.0184 35.0, 36.6 -0.15
BXD79 m 35.52 0.40866   5 0.18276 0.0115 35.2, 36.2 -0.44
BXD8 m 36.14 0.53666   5 0.24 0.0148 35.6, 36.8 0.25
BXD81 m 34.875 0.62915   4 0.31458 0.018 34.3, 35.6 -1.16
BXD83 m 36.0 0.3559   4 0.17795 0.0099 35.7, 36.5 0.09
BXD84 m 36.2 0.8544   3 0.49329 0.0236 35.4, 37.1 0.32
BXD85 m 35.6 0.46904   4 0.23452 0.0132 35.3, 36.3 -0.35
BXD87 m 37.16 0.2881   5 0.12884 0.0078 36.8, 37.6 1.39
BXD89 m 36.85 0.42032   4 0.21016 0.0114 36.4, 37.4 1.04
BXD90 m 36.475 0.61305   4 0.30653 0.0168 35.9, 37.1 0.62
BXD95 m 35.18 0.78549   5 0.35128 0.0223 34.1, 36.2 -0.82
BXD98 m 35.24 0.54129   5 0.24207 0.0154 34.7, 36.1 -0.75
BXD99 m 36.32 0.58052   5 0.25962 0.016 35.7, 37.2 0.45
C57BL/6J m 37.0 0.4062   5 0.18166 0.011 36.6, 37.5 1.21
DBA/2J m 37.38 0.74967   5 0.33526 0.0201 36.4, 38.5 1.63


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 36.44 0.2672327113 36.9670206458 35.9129793542
BXD100 m 37.04 0.2672327113 37.5670206458 36.5129793542
BXD101 m 35.7 0.2987752542 36.2892269947 35.1107730053
BXD11 m 36.18 0.2672327113 36.7070206458 35.6529793542
BXD12 m 37.28 0.2672327113 37.8070206458 36.7529793542
BXD16 m 36.0 0.2672327113 36.5270206458 35.4729793542
BXD2 m 36.64 0.2672327113 37.1670206458 36.1129793542
BXD27 m 33.425 0.2987752542 34.0142269947 32.8357730053
BXD32 m 36.1666666667 0.3449959468 36.8470473947 35.4862859386
BXD34 m 35.36 0.2672327113 35.8870206458 34.8329793542
BXD39 m 35.7 0.2672327113 36.2270206458 35.1729793542
BXD40 m 35.775 0.2987752542 36.3642269947 35.1857730053
BXD43 m 36.2666666667 0.3449959468 36.9470473947 35.5862859386
BXD44 m 35.8111111111 0.1991835028 36.2039291076 35.4182931146
BXD45 m 36.52 0.2672327113 37.0470206458 35.9929793542
BXD48 m 35.56 0.2672327113 36.0870206458 35.0329793542
BXD48a m 35.9333333333 0.3449959468 36.6137140614 35.2529526053
BXD49 m 35.34 0.2672327113 35.8670206458 34.8129793542
BXD50 m 35.68 0.2672327113 36.2070206458 35.1529793542
BXD51 m 35.4 0.2987752542 35.9892269947 34.8107730053
BXD53 m 35.88 0.2672327113 36.4070206458 35.3529793542
BXD55 m 37.025 0.2987752542 37.6142269947 36.4357730053
BXD56 m 37.1 0.3449959468 37.780380728 36.419619272
BXD6 m 36.14 0.2672327113 36.6670206458 35.6129793542
BXD60 m 34.85 0.2987752542 35.4392269947 34.2607730053
BXD61 m 36.42 0.2672327113 36.9470206458 35.8929793542
BXD62 m 36.275 0.2987752542 36.8642269947 35.6857730053
BXD63 m 33.6 0.4225320165 34.4332928073 32.7667071927
BXD64 m 34.625 0.2987752542 35.2142269947 34.0357730053
BXD65 m 36.025 0.2987752542 36.6142269947 35.4357730053
BXD65a m 34.725 0.2987752542 35.3142269947 34.1357730053
BXD66 m 35.6 0.2672327113 36.1270206458 35.0729793542
BXD67 m 35.78 0.2672327113 36.3070206458 35.2529793542
BXD68 m 35.4 0.2987752542 35.9892269947 34.8107730053
BXD69 m 33.8 0.2672327113 34.3270206458 33.2729793542
BXD70 m 36.95 0.2987752542 37.5392269947 36.3607730053
BXD71 m 35.0333333333 0.3449959468 35.7137140614 34.3529526053
BXD73 m 35.56 0.2672327113 36.0870206458 35.0329793542
BXD73a m 37.22 0.2672327113 37.7470206458 36.6929793542
BXD73b m 35.92 0.2672327113 36.4470206458 35.3929793542
BXD75 m 37.42 0.2672327113 37.9470206458 36.8929793542
BXD77 m 35.78 0.2672327113 36.3070206458 35.2529793542
BXD79 m 35.52 0.2672327113 36.0470206458 34.9929793542
BXD8 m 36.14 0.2672327113 36.6670206458 35.6129793542
BXD81 m 34.875 0.2987752542 35.4642269947 34.2857730053
BXD83 m 36.0 0.2987752542 36.5892269947 35.4107730053
BXD84 m 36.2 0.3449959468 36.880380728 35.519619272
BXD85 m 35.6 0.2987752542 36.1892269947 35.0107730053
BXD87 m 37.16 0.2672327113 37.6870206458 36.6329793542
BXD89 m 36.85 0.2987752542 37.4392269947 36.2607730053
BXD90 m 36.475 0.2987752542 37.0642269947 35.8857730053
BXD95 m 35.18 0.2672327113 35.7070206458 34.6529793542
BXD98 m 35.24 0.2672327113 35.7670206458 34.7129793542
BXD99 m 36.32 0.2672327113 36.8470206458 35.7929793542
C57BL/6J m 37.0 0.2672327113 37.5270206458 36.4729793542
DBA/2J m 37.38 0.2672327113 37.9070206458 36.8529793542




  GWAS USING LINEAR MIXED MODELS