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Project measure / variable:   Auwerx1   bw_sac_CD

ID, description, units MPD:111224   bw_sac_CD   body weight at sacrifice, 29 wks of age   [g]  CD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   57 strains     sex: m     age: 29wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Auwerx1 - body weight at sacrifice, 29 wks of age CD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested57 strains
Mean of the strain means35.583   g
Median of the strain means34.39   g
SD of the strain means± 5.9393
Coefficient of variation (CV)0.1669
Min–max range of strain means24.757   –   51.96   g
Mean sample size per strain4.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 56 8342.3929 148.9713 10.5798 < 0.0001
Residuals 187 2633.106 14.0808


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 28.326 4.0455   5 1.8092 0.1428 24.79, 35.07 -1.22
BXD100 m 40.977 8.9349   3 5.1586 0.218 31.45, 49.17 0.91
BXD101 m 31.305 2.6645   4 1.3322 0.0851 28.34, 34.82 -0.72
BXD11 m 33.44 5.3599   2   3.79 0.1603 29.65, 37.23 -0.36
BXD12 m 29.236 1.9522   5 0.87304 0.0668 26.34, 31.5 -1.07
BXD16 m 51.96 4.0295   4 2.0148 0.0776 46.24, 54.9 2.76
BXD2 m 35.383 2.4102   4 1.2051 0.0681 32.36, 37.73 -0.03
BXD27 m 33.138 2.8374   5 1.2689 0.0856 29.55, 37.12 -0.41
BXD32 m 34.206 2.4921   5 1.1145 0.0729 31.68, 37.52 -0.23
BXD34 m 36.455 1.3184   4 0.65922 0.0362 35.18, 38.17 0.15
BXD39 m 43.078 2.1402   5 0.95711 0.0497 40.86, 46.55 1.26
BXD40 m 24.757 0.48211   3 0.27835 0.0195 24.2, 25.04 -1.82
BXD43 m 30.783 3.3431   3 1.9301 0.1086 28.43, 34.61 -0.81
BXD44 m 35.326 4.0525   9 1.3508 0.1147 29.17, 40.9 -0.04
BXD45 m 32.438 2.6742   4 1.3371 0.0824 29.2, 35.23 -0.53
BXD48 m 37.014 2.8992   5 1.2966 0.0783 34.2, 41.86 0.24
BXD48a m 44.354 4.8856   5 2.1849 0.1101 38.62, 50.14 1.48
BXD49 m 39.62 1.7144   4 0.85721 0.0433 37.97, 41.92 0.68
BXD50 m 35.962 3.6682   4 1.8341 0.102 30.65, 39.06 0.06
BXD51 m 32.087 1.594   3 0.9203 0.0497 30.37, 33.52 -0.59
BXD53 m 33.968 4.9069   5 2.1945 0.1445 30.1, 42.4 -0.27
BXD55 m 30.044 2.7068   5 1.2105 0.0901 25.79, 32.86 -0.93
BXD56 m 32.327 1.7639   3 1.0184 0.0546 30.29, 33.36 -0.55
BXD6 m 34.504 2.9445   5 1.3168 0.0853 31.91, 39.11 -0.18
BXD60 m 45.383 2.7946   4 1.3973 0.0616 42.71, 49.25 1.65
BXD61 m 34.39 3.5437   3 2.046 0.103 30.48, 37.39 -0.2
BXD62 m 31.15 3.37   4 1.685 0.1082 27.97, 34.42 -0.75
BXD63 m 35.403 1.415   3 0.81695 0.04 33.99, 36.82 -0.03
BXD64 m 32.487 0.78568   4 0.39284 0.0242 31.44, 33.26 -0.52
BXD65 m 47.123 3.2932   4 1.6466 0.0699 43.54, 51.2 1.94
BXD65a m 44.406 0.70088   5 0.31344 0.0158 43.43, 45.39 1.49
BXD65b m 48.375 1.8076   4 0.90379 0.0374 46.73, 50.91 2.15
BXD66 m 47.298 4.4651   5 1.9969 0.0944 41.2, 53.12 1.97
BXD67 m 37.866 8.1588   5 3.6487 0.2155 28.78, 47.51 0.38
BXD68 m 41.717 7.1218   3 4.1118 0.1707 33.52, 46.39 1.03
BXD69 m 39.452 1.2834   5 0.57397 0.0325 38.19, 41.59 0.65
BXD70 m 30.09 8.9809   4 4.4905 0.2985 24.38, 43.44 -0.92
BXD71 m 36.86 3.4781   4 1.7391 0.0944 33.86, 41.33 0.22
BXD73 m 30.803 5.4168   4 2.7084 0.1759 27.1, 38.85 -0.8
BXD73a m 41.2 2.2289   5 0.99681 0.0541 38.64, 44.14 0.95
BXD73b m 37.694 4.0158   5 1.7959 0.1065 33.45, 42.85 0.36
BXD75 m 32.876 4.7814   5 2.1383 0.1454 27.31, 38.46 -0.46
BXD77 m 31.102 4.2651   5 1.9074 0.1371 25.3, 35.3 -0.75
BXD79 m 37.606 3.1366   5 1.4027 0.0834 33.0, 40.98 0.34
BXD8 m 27.975 2.5749   4 1.2874 0.092 25.63, 31.65 -1.28
BXD81 m 26.15 5.6224   4 2.8112 0.215 19.3, 32.67 -1.59
BXD83 m 28.477 2.155   3 1.2442 0.0757 26.58, 30.82 -1.2
BXD84 m 35.613 3.0584   3 1.7658 0.0859 32.1, 37.68 0.01
BXD85 m 43.978 3.3561   5 1.5009 0.0763 38.79, 47.94 1.41
BXD87 m 28.008 1.9278   5 0.86214 0.0688 26.42, 30.87 -1.28
BXD89 m 33.922 2.0268   4 1.0134 0.0597 31.68, 35.76 -0.28
BXD90 m 33.008 2.9083   4 1.4542 0.0881 29.82, 36.65 -0.43
BXD95 m 34.487 4.6931   4 2.3465 0.1361 28.35, 38.44 -0.18
BXD98 m 36.315 4.7191   4 2.3595 0.1299 29.35, 39.82 0.12
BXD99 m 31.432 1.6407   5 0.73376 0.0522 28.77, 33.28 -0.7
C57BL/6J m 31.302 2.1085   5 0.94297 0.0674 27.92, 33.39 -0.72
DBA/2J m 33.572 3.0348   4 1.5174 0.0904 30.27, 37.61 -0.34


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 28.326 1.6781406783 31.6365201945 25.0154798055
BXD100 m 40.9766666667 2.1664702998 45.2505298601 36.7028034732
BXD101 m 31.305 1.8762183162 35.0062740978 27.6037259022
BXD11 m 33.44 2.6533733888 38.6743920272 28.2056079728
BXD12 m 29.236 1.6781406783 32.5465201945 25.9254798055
BXD16 m 51.96 1.8762183162 55.6612740978 48.2587259022
BXD2 m 35.3825 1.8762183162 39.0837740978 31.6812259022
BXD27 m 33.138 1.6781406783 36.4485201945 29.8274798055
BXD32 m 34.206 1.6781406783 37.5165201945 30.8954798055
BXD34 m 36.455 1.8762183162 40.1562740978 32.7537259022
BXD39 m 43.078 1.6781406783 46.3885201945 39.7674798055
BXD40 m 24.7566666667 2.1664702998 29.0305298601 20.4828034732
BXD43 m 30.7833333333 2.1664702998 35.0571965268 26.5094701399
BXD44 m 35.3255555556 1.2508122108 37.7930716208 32.8580394903
BXD45 m 32.4375 1.8762183162 36.1387740978 28.7362259022
BXD48 m 37.014 1.6781406783 40.3245201945 33.7034798055
BXD48a m 44.354 1.6781406783 47.6645201945 41.0434798055
BXD49 m 39.62 1.8762183162 43.3212740978 35.9187259022
BXD50 m 35.9625 1.8762183162 39.6637740978 32.2612259022
BXD51 m 32.0866666667 2.1664702998 36.3605298601 27.8128034732
BXD53 m 33.968 1.6781406783 37.2785201945 30.6574798055
BXD55 m 30.044 1.6781406783 33.3545201945 26.7334798055
BXD56 m 32.3266666667 2.1664702998 36.6005298601 28.0528034732
BXD6 m 34.504 1.6781406783 37.8145201945 31.1934798055
BXD60 m 45.3825 1.8762183162 49.0837740978 41.6812259022
BXD61 m 34.39 2.1664702998 38.6638631935 30.1161368065
BXD62 m 31.15 1.8762183162 34.8512740978 27.4487259022
BXD63 m 35.4033333333 2.1664702998 39.6771965268 31.1294701399
BXD64 m 32.4875 1.8762183162 36.1887740978 28.7862259022
BXD65 m 47.1225 1.8762183162 50.8237740978 43.4212259022
BXD65a m 44.406 1.6781406783 47.7165201945 41.0954798055
BXD65b m 48.375 1.8762183162 52.0762740978 44.6737259022
BXD66 m 47.298 1.6781406783 50.6085201945 43.9874798055
BXD67 m 37.866 1.6781406783 41.1765201945 34.5554798055
BXD68 m 41.7166666667 2.1664702998 45.9905298601 37.4428034732
BXD69 m 39.452 1.6781406783 42.7625201945 36.1414798055
BXD70 m 30.09 1.8762183162 33.7912740978 26.3887259022
BXD71 m 36.86 1.8762183162 40.5612740978 33.1587259022
BXD73 m 30.8025 1.8762183162 34.5037740978 27.1012259022
BXD73a m 41.2 1.6781406783 44.5105201945 37.8894798055
BXD73b m 37.694 1.6781406783 41.0045201945 34.3834798055
BXD75 m 32.876 1.6781406783 36.1865201945 29.5654798055
BXD77 m 31.102 1.6781406783 34.4125201945 27.7914798055
BXD79 m 37.606 1.6781406783 40.9165201945 34.2954798055
BXD8 m 27.975 1.8762183162 31.6762740978 24.2737259022
BXD81 m 26.15 1.8762183162 29.8512740978 22.4487259022
BXD83 m 28.4766666667 2.1664702998 32.7505298601 24.2028034732
BXD84 m 35.6133333333 2.1664702998 39.8871965268 31.3394701399
BXD85 m 43.978 1.6781406783 47.2885201945 40.6674798055
BXD87 m 28.008 1.6781406783 31.3185201945 24.6974798055
BXD89 m 33.9225 1.8762183162 37.6237740978 30.2212259022
BXD90 m 33.0075 1.8762183162 36.7087740978 29.3062259022
BXD95 m 34.4875 1.8762183162 38.1887740978 30.7862259022
BXD98 m 36.315 1.8762183162 40.0162740978 32.6137259022
BXD99 m 31.432 1.6781406783 34.7425201945 28.1214798055
C57BL/6J m 31.302 1.6781406783 34.6125201945 27.9914798055
DBA/2J m 33.5725 1.8762183162 37.2737740978 29.8712259022




  GWAS USING LINEAR MIXED MODELS