Project measure / variable:   Auwerx1   bw_20wks_HFD

ID, description, units MPD:111205   bw_20wks_HFD   body weight at 20 wks of age   [g]  HFD  
high-fat diet study
Data set, strains Auwerx1   BXD w/par   54 strains     sex: m     age: 20wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Auwerx1 - body weight at 20 wks of age HFD



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested54 strains
Mean of the strain means44.714   g
Median of the strain means45.513   g
SD of the strain means± 6.7226
Coefficient of variation (CV)0.1503
Min–max range of strain means28.65   –   59.49   g
Mean sample size per strain4.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 53 10797.3461 203.7235 15.8361 < 0.0001
Residuals 188 2418.5201 12.8645


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 m 36.524 3.7904   5 1.6951 0.1038 30.29, 40.19 -1.22
BXD100 m 50.67 5.1574   5 2.3065 0.1018 45.88, 57.26 0.89
BXD101 m 46.122 1.1431   4 0.57154 0.0248 45.1, 47.53 0.21
BXD11 m 50.03 4.8792   5 2.1821 0.0975 42.0, 53.33 0.79
BXD12 m 28.65 1.6087   5 0.71945 0.0562 27.25, 30.9 -2.39
BXD16 m 56.47 3.526   5 1.5769 0.0624 51.82, 60.57 1.75
BXD2 m 43.922 5.3756   5 2.404 0.1224 35.23, 48.46 -0.12
BXD27 m 48.803 1.8878   4 0.94388 0.0387 46.56, 51.07 0.61
BXD32 m 45.947 4.6109   3 2.6621 0.1004 41.61, 50.79 0.18
BXD34 m 36.602 6.2463   5 2.7935 0.1707 30.09, 44.16 -1.21
BXD39 m 45.074 1.0003   5 0.44734 0.0222 44.05, 46.1 0.05
BXD40 m 30.033 2.2074   4 1.1037 0.0735 28.02, 33.09 -2.18
BXD43 m 40.5 3.6057   3 2.0818 0.089 36.38, 43.08 -0.63
BXD44 m 59.49 5.2209   4 2.6105 0.0878 52.48, 65.11 2.2
BXD48 m 51.44 5.7141   5 2.5554 0.1111 43.51, 57.43 1.0
BXD48a m 53.71 5.2905   3 3.0544 0.0985 49.31, 59.58 1.34
BXD49 m 47.324 6.3902   5 2.8578 0.135 39.02, 55.16 0.39
BXD50 m 43.632 4.3181   5 1.9311 0.099 38.36, 47.35 -0.16
BXD53 m 45.828 2.6056   5 1.1653 0.0569 42.8, 48.95 0.17
BXD55 m 36.69 0.67295   4 0.33648 0.0183 36.07, 37.34 -1.19
BXD56 m 39.698 1.8487   4 0.92437 0.0466 37.27, 41.71 -0.75
BXD6 m 42.922 4.0356   5 1.8048 0.094 37.9, 48.16 -0.27
BXD60 m 57.8 2.2224   5 0.99387 0.0384 55.35, 60.44 1.95
BXD61 m 48.952 1.5514   5 0.69383 0.0317 47.42, 51.39 0.63
BXD62 m 41.203 1.7649   4 0.88247 0.0428 38.84, 42.85 -0.52
BXD63 m 48.92 1.4707   3 0.84914 0.0301 47.93, 50.61 0.63
BXD64 m 45.197 4.9549   4 2.4775 0.1096 38.88, 50.98 0.07
BXD65 m 53.67 2.515   4 1.2575 0.0469 50.94, 57.03 1.33
BXD65a m 49.747 3.8586   4 1.9293 0.0776 46.48, 55.32 0.75
BXD66 m 48.12 3.3268   5 1.4878 0.0691 42.22, 50.16 0.51
BXD67 m 47.936 3.3189   5 1.4843 0.0692 42.27, 50.81 0.48
BXD68 m 38.888 4.5674   4 2.2837 0.1175 33.52, 44.42 -0.87
BXD69 m 41.072 1.1474   5 0.51312 0.0279 39.78, 42.49 -0.54
BXD70 m 42.725 4.1513   4 2.0756 0.0972 37.38, 46.74 -0.3
BXD71 m 50.31 3.5091   4 1.7546 0.0698 46.24, 54.77 0.83
BXD73 m 40.04 3.8227   5 1.7095 0.0955 34.45, 43.98 -0.7
BXD73a m 43.97 2.2694   5 1.0149 0.0516 41.19, 46.98 -0.11
BXD73b m 47.952 2.5002   5 1.1181 0.0521 44.27, 50.38 0.48
BXD75 m 42.874 1.8976   5 0.84865 0.0443 40.74, 44.89 -0.27
BXD77 m 42.992 4.0672   5 1.8189 0.0946 38.03, 47.67 -0.26
BXD79 m 44.888 2.7831   5 1.2447 0.062 40.14, 47.36 0.03
BXD8 m 32.642 4.0356   5 1.8048 0.1236 27.24, 37.91 -1.8
BXD81 m 45.987 2.0783   4 1.0392 0.0452 44.07, 48.53 0.19
BXD83 m 34.802 3.4434   4 1.7217 0.0989 29.97, 38.02 -1.47
BXD84 m 48.233 4.8317   3 2.7896 0.1002 45.3, 53.81 0.52
BXD85 m 51.57 2.1028   4 1.0514 0.0408 49.09, 53.84 1.02
BXD87 m 32.362 1.5802   5 0.70667 0.0488 30.32, 34.72 -1.84
BXD89 m 39.16 2.2703   4 1.1351 0.058 36.19, 40.98 -0.83
BXD90 m 47.49 3.5701   4 1.785 0.0752 42.15, 49.57 0.41
BXD95 m 49.798 5.2098   5 2.3299 0.1046 40.93, 54.18 0.76
BXD98 m 48.78 2.3778   5 1.0634 0.0487 45.48, 51.32 0.6
BXD99 m 48.168 3.3551   5 1.5004 0.0697 44.46, 52.48 0.51
C57BL/6J m 35.974 2.8997   5 1.2968 0.0806 32.65, 39.51 -1.3
DBA/2J m 42.238 2.6362   5 1.1789 0.0624 39.65, 46.12 -0.37


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 m 36.524 1.6040242239 39.6881987442 33.3598012558
BXD100 m 50.668 1.6040242239 53.8321987442 47.5038012558
BXD101 m 46.1225 1.7933536011 49.6601817432 42.5848182568
BXD11 m 50.026 1.6040242239 53.1901987442 46.8618012558
BXD12 m 28.65 1.6040242239 31.8141987442 25.4858012558
BXD16 m 56.468 1.6040242239 59.6321987442 53.3038012558
BXD2 m 43.922 1.6040242239 47.0861987442 40.7578012558
BXD27 m 48.8025 1.7933536011 52.3401817432 45.2648182568
BXD32 m 45.9466666667 2.0707863687 50.0316296802 41.8617036531
BXD34 m 36.602 1.6040242239 39.7661987442 33.4378012558
BXD39 m 45.074 1.6040242239 48.2381987442 41.9098012558
BXD40 m 30.0325 1.7933536011 33.5701817432 26.4948182568
BXD43 m 40.5 2.0707863687 44.5849630135 36.4150369865
BXD44 m 59.4875 1.7933536011 63.0251817432 55.9498182568
BXD48 m 51.438 1.6040242239 54.6021987442 48.2738012558
BXD48a m 53.71 2.0707863687 57.7949630135 49.6250369865
BXD49 m 47.324 1.6040242239 50.4881987442 44.1598012558
BXD50 m 43.632 1.6040242239 46.7961987442 40.4678012558
BXD53 m 45.828 1.6040242239 48.9921987442 42.6638012558
BXD55 m 36.69 1.7933536011 40.2276817432 33.1523182568
BXD56 m 39.6975 1.7933536011 43.2351817432 36.1598182568
BXD6 m 42.922 1.6040242239 46.0861987442 39.7578012558
BXD60 m 57.8 1.6040242239 60.9641987442 54.6358012558
BXD61 m 48.952 1.6040242239 52.1161987442 45.7878012558
BXD62 m 41.2025 1.7933536011 44.7401817432 37.6648182568
BXD63 m 48.92 2.0707863687 53.0049630135 44.8350369865
BXD64 m 45.1975 1.7933536011 48.7351817432 41.6598182568
BXD65 m 53.6675 1.7933536011 57.2051817432 50.1298182568
BXD65a m 49.7475 1.7933536011 53.2851817432 46.2098182568
BXD66 m 48.12 1.6040242239 51.2841987442 44.9558012558
BXD67 m 47.936 1.6040242239 51.1001987442 44.7718012558
BXD68 m 38.8875 1.7933536011 42.4251817432 35.3498182568
BXD69 m 41.072 1.6040242239 44.2361987442 37.9078012558
BXD70 m 42.725 1.7933536011 46.2626817432 39.1873182568
BXD71 m 50.3075 1.7933536011 53.8451817432 46.7698182568
BXD73 m 40.04 1.6040242239 43.2041987442 36.8758012558
BXD73a m 43.97 1.6040242239 47.1341987442 40.8058012558
BXD73b m 47.952 1.6040242239 51.1161987442 44.7878012558
BXD75 m 42.874 1.6040242239 46.0381987442 39.7098012558
BXD77 m 42.992 1.6040242239 46.1561987442 39.8278012558
BXD79 m 44.888 1.6040242239 48.0521987442 41.7238012558
BXD8 m 32.642 1.6040242239 35.8061987442 29.4778012558
BXD81 m 45.9875 1.7933536011 49.5251817432 42.4498182568
BXD83 m 34.8025 1.7933536011 38.3401817432 31.2648182568
BXD84 m 48.2333333333 2.0707863687 52.3182963469 44.1483703198
BXD85 m 51.57 1.7933536011 55.1076817432 48.0323182568
BXD87 m 32.362 1.6040242239 35.5261987442 29.1978012558
BXD89 m 39.16 1.7933536011 42.6976817432 35.6223182568
BXD90 m 47.49 1.7933536011 51.0276817432 43.9523182568
BXD95 m 49.798 1.6040242239 52.9621987442 46.6338012558
BXD98 m 48.78 1.6040242239 51.9441987442 45.6158012558
BXD99 m 48.168 1.6040242239 51.3321987442 45.0038012558
C57BL/6J m 35.974 1.6040242239 39.1381987442 32.8098012558
DBA/2J m 42.238 1.6040242239 45.4021987442 39.0738012558




  GWAS USING LINEAR MIXED MODELS