MPD: Data set: Stylianou1

An error occurred on this page.
These results could be incomplete or invalid. Staff have been notified.

Stylianou1: Weight and distribution of fat pads in F2 progeny of SM/J x NZB/BlNJ (2006)

Stylianou IM, Korstanje R, Li R, Sheehan S, Paigen B, Churchill GA. Quantitative trait locus analysis for obesity reveals multiple networks of interacting loci. Mamm Genome. 2006 Jan;17(1):22-36. Epub 2006 Jan 13. PubMed 16416088

Stylianou1 downloads
QTL projects have several available downloads.
Use the QTL Data Downloads button near the bottom of this page.

Ontology terms mapped to Stylianou1 measures:

MA:0000009 adipose tissue
MA:0000472 abdominal fat pad
MA:0002481 fat pad
MA:0002547 gonadal fat pad
MA:0002548 inguinal fat pad
MA:0002549 retroperitoneal fat pad
MP:0001256 abnormal body length
MP:0001259 abnormal body weight
MP:0005335 abnormal gonadal fat pad morphology
MP:0005336 abnormal inguinal fat pad morphology
MP:0005337 abnormal retroperitoneal fat pad morphology
MP:0008903 abnormal mesenteric fat pad morphology
MP:0020130 abnormal total fat pad weight
VT:0001256 body length
VT:0001259 body mass
VT:0010423 gonadal fat pad mass
VT:0010424 inguinal fat pad mass
VT:0010427 mesenteric fat pad mass
VT:0010430 retroperitoneal fat pad mass
VT:0015008 total fat pad mass

Investigators	Ioannis M Stylianou Xenon Pharmaceuticals, Burnaby, British Columbia CANADA Gary A Churchill The Jackson Laboratory, Bar Harbor, ME
Participants	Korstanje R, Li R, Sheehan S, Paigen B
Contact	Gary A Churchill gary.churchill@jax.org
Affiliated Center	QTL Archive
Acknowledgements	Funding provided by NIH HL66611, GM070683, CA34196.
Project type	QTL Archive data set
MPD identifiers	Stylianou1 MPD:184
Data changelog	No updates/corrections. Initial release date: 01/2008.

An intercross of 513 F(2) progeny between the SM/J x NZB/BlNJ inbred mouse strains was generated to identify QTLs that are involved in the weight of four fat pads: mesenteric, inguinal, gonadal, and retroperitoneal. Mice were administered a high fat (15%) diet from 8 to 24 wks of age (16 wks on high fat diet). For a detailed protocol see Stylianou et al 2006.

QTL data set parameters:

Progenitor strains	NZB/BlNJ SM/J
Cross type	F2 intercross
Population size	259 ♀ 254 ♂
Age	24wks

Measured phenotypes: To access these data use the QTL Data Downloads button at bottom of page.

Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	Sex	Age	Sample Size (Avg)
Stylianou1	body weight	high-fat diet	body weight [g] bw 18401	QTL population	both	24wks	N=256

Stylianou1	body weight	high-fat diet	body weight, log transformed [log(g)] log_bw 18402	QTL population	both	24wks	N=256

Stylianou1	body size and weight	high-fat diet	body length [cm] length 18403	QTL population	both	24wks	N=256

Stylianou1	body size and weight	high-fat diet	body length, log transformed [log(cm)] log_length 18404	QTL population	both	24wks	N=256

Stylianou1	fat pad weights	high-fat diet	total weight of all fat pads [g] fat_pads 18405	QTL population	both	24wks	N=256

Stylianou1	fat pad weights	high-fat diet	total weight of all fat pads, log transformed [log(g)] log_fat_pads 18406	QTL population	both	24wks	N=256

Stylianou1	fat pad weights	high-fat diet	inguinal fat pad weight (left) [g] inguinal 18407	QTL population	both	24wks	N=256

Stylianou1	fat pad weights	high-fat diet	inguinal fat pad weight (total) [g] inguinal_tot 18408	QTL population	both	24wks	N=256

Stylianou1	fat pad weights	high-fat diet	inguinal fat pads, normalized to total fat pads, log transformed [log(ratio)] log_inguinal 18409	QTL population	both	24wks	N=256

Stylianou1	fat pad weights	high-fat diet	gonadal fat pad weight (left) [g] gonadal 18410	QTL population	both	24wks	N=256

Stylianou1	fat pad weights	high-fat diet	gonadal fat pad weight (total) [g] gonadal_tot 18411	QTL population	both	24wks	N=256

Stylianou1	fat pad weights	high-fat diet	gonadal fat pads, normalized to total fat pads, log transformed [log(ratio)] log_gonadal 18412	QTL population	both	24wks	N=256

Stylianou1	fat pad weights	high-fat diet	retroperitoneal fat pad weight (left) [g] peritoneal 18413	QTL population	both	24wks	N=256

Stylianou1	fat pad weights	high-fat diet	retroperitoneal fat pad weight (total) [g] peritoneal_tot 18414	QTL population	both	24wks	N=256

Stylianou1	fat pad weights	high-fat diet	retroperitoneal fat pads, normalized to total fat pads, log transformed [log(ratio)] log_peritoneal 18415	QTL population	both	24wks	N=256

Stylianou1	fat pad weights	high-fat diet	mesenteric fat pad weight [g] mesenteric 18416	QTL population	both	24wks	N=256

Stylianou1	fat pad weights	high-fat diet	mesenteric fat pad, normalized to total fat pads, log transformed [log(ratio)] log_mesenteric 18417	QTL population	both	24wks	N=256

Stylianou1	fat pad weights	high-fat diet	adiposity index (total fat pad weight normalized to lean body weight) [%] AI 18418	QTL population	both	24wks	N=256

To see more rows use the paging control at top.

Associated genomic features

MGI-curated QTL / genomic features that have been associated with this data set:
Adip10 Adip11 Adip12 Adip13 Adip14 Adip15 Adip16 Adip17 Adip18 Bwtq10 Bwtq11 Bwtq12 Bwtq8 Bwtq9 Obq20 Obq21 Obq22 Obwq1 Obwq2 Obwq3 Obwq4 Obwq5

Project / data set: Stylianou1 a.k.a. Stylianou_2006
Excel file: Data_Description_B6xA_Stylianou2006b.xlsx
Excel file: Data_Description_CSS3_Stylianou2006c.xlsx
Excel file: Data_Description_CSS8_Stylianou2006d.xlsx
Excel file: ._Data_Description_CSS11_Stylianou2006e.xlsx
Excel file: Data_Description_CSS11_Stylianou2006e.xlsx
CSV file: Stylianou2006b_B6xA_B37_Data.csv
CSV file: Stylianou2006c_CSS3_B37_Data.csv
CSV file: Stylianou2006d_CSS8_B37_Data.csv
CSV file: ._Stylianou2006e_CSS11_B37_Data.csv
CSV file: Stylianou2006e_CSS11_B37_Data.csv
Readme / text file: readme_Stylianou2006b.txt
Readme / text file: readme_Stylianou2006c.txt
Readme / text file: readme_Stylianou2006d.txt
Readme / text file: ._readme_Stylianou2006e.txt
Readme / text file: readme_Stylianou2006e.txt

An error occurred on this page.These results could be incomplete or invalid. Staff have been notified.

Stylianou1: Weight and distribution of fat pads in F2 progeny of SM/J x NZB/BlNJ (2006)

An error occurred on this page.
These results could be incomplete or invalid. Staff have been notified.