MPD: Phenotype measures mapped to VT:0010444, kinesthetic behavior trait

Phenotype measures in JaxKOMP-LAP associated with ontology term
VT:0010444 'kinesthetic behavior trait'

All measures in this list are mapped to the ontology descendants of VT:0010444. None are mapped to VT:0010444 directly.

VT:0001392 locomotor behavior trait
VT:0003492 involuntary movement trait
VT:0004262 physical strength trait
VT:0010725 startle reflex trait
VT:0010731 gait trait
VT:0010748 stereotypic behavior trait

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
JaxKOMP-LAP:2	JaxKOMP-LAP	open field test	(none)	average speed in center of arena, 20 min test [cm/s] center_speed center_average_speed 101232 IMPC_OFD_017_001	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:3	JaxKOMP-LAP	open field test	(none)	distance traveled in center of arena, 20 min test [cm] center_distance center_distance_traveled 101233 IMPC_OFD_014_001	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:4	JaxKOMP-LAP	open field test	(none)	permanence time in center of arena, 20 min test [s] center_permanence center_permanence_time 101234 IMPC_OFD_016_001	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:5	JaxKOMP-LAP	open field test	(none)	number of clockwise revolution episodes, 20 min test [n] clockwise 101236	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:6	JaxKOMP-LAP	open field test	(none)	permanence time in corners of arena, 20 min test [s] corners_permanence corners_permanence_time 101237	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:7	JaxKOMP-LAP	open field test	(none)	number of counter-clockwise revolution episodes, 20 min test [n] counter_clockwise 101238	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:8	JaxKOMP-LAP	open field test	(none)	distance traveled, 20 min test [cm] distance distance_traveled_5min_bins 101239 IMPC_OFD_005_001 1st 5min 2nd 5min 3rd 5min 4th 5min	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:12	JaxKOMP-LAP	open field test	(none)	total distance traveled, 20 min test [cm] distance_total distance_traveled_total 101243 IMPC_OFD_020_001	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:13	JaxKOMP-LAP	open field test	(none)	distance traveled habituation ratio, 20 min test [ratio] distance_habituation distance_traveled_habituation_ratio 101244	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:14	JaxKOMP-LAP	open field test	(none)	distance traveled slope, 20 min test [] distance_slope distance_traveled_slope 101245	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:16	JaxKOMP-LAP	open field test	(none)	number of rears in 5 min bins, 20 min test [n] rears number_of_rears_5min_bins 101249 IMPC_OFD_006_001 1st 5min 2nd 5min 3rd 5min 4th 5min	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:20	JaxKOMP-LAP	open field test	(none)	total number of rears, 20 min test [n] rears_total number_of_rears_total 101253	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:21	JaxKOMP-LAP	open field test	(none)	percentage of total time in center of arena, 20 min test [%] pct_center pcttime_center 101254 IMPC_OFD_022_001	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:22	JaxKOMP-LAP	open field test	(none)	percentage of total time in center, habituation ratio, 20 min test [ratio] pct_center_habituation pcttime_center_habituation_ratio 101255	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:23	JaxKOMP-LAP	open field test	(none)	percentage of total time in center of arena, slope, 20 min test [] pct_center_slope pcttime_center_slope 101256	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:24	JaxKOMP-LAP	open field test	(none)	percentage of total time in corners of arena, 20 min test [s] pct_corners pcttime_corners 101257	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:25	JaxKOMP-LAP	open field test	(none)	percentage of total time in corners, habituation ratio, 20 min test [%] pct_corners_habituation pcttime_corners_habituation_ratio 101258	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:26	JaxKOMP-LAP	open field test	(none)	percentage of total time in corners, slope, 20 min test [] pct_corners_slope pcttime_corners_slope 101259	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:27	JaxKOMP-LAP	open field test	(none)	average speed in periphery of arena, 20 min test [cm/s] periphery_speed periphery_average_speed 101260 IMPC_OFD_013_001	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:28	JaxKOMP-LAP	open field test	(none)	distance traveled in periphery of arena, 20 min test [cm] periphery_distance periphery_distance_traveled 101261 IMPC_OFD_010_001	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:29	JaxKOMP-LAP	open field test	(none)	permanence time in periphery of arena, 20 min test [s] periphery_permanence periphery_permanence_time 101262 IMPC_OFD_012_001	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:30	JaxKOMP-LAP	open field test	(none)	whole arena time spent mobile, 20 min test [s] time_mobile time_spent_mobile 101264	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:31	JaxKOMP-LAP	open field test	(none)	whole arena time spent vertical, 20 min test [s] time_vertical vertical_time 101265	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:32	JaxKOMP-LAP	open field test	(none)	whole arena average speed, 20 min test [cm/s] whole_speed whole_arena_average_speed 101266 IMPC_OFD_009_001	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:33	JaxKOMP-LAP	open field test	(none)	whole arena permanence time, 20 min test [s] whole_arena_permanence_time 101267 IMPC_OFD_008_001	KOMP	108	both	66-72wks	N=6	2021

JaxKOMP-LAP:34	JaxKOMP-LAP	open field test	(none)	whole arena resting time, 20 min test [s] whole_rest whole_arena_resting_time 101268 IMPC_OFD_007_001	KOMP	118	both	66-72wks	N=8	2021

JaxKOMP-LAP:115	JaxKOMP-LAP	observation (SHIRPA)	(none)	tremor tremor 101420 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:118	JaxKOMP-LAP	observation (SHIRPA)	(none)	locomotor activity (number of squares in the arena the mouse moves into with all four paws in first 30 s of test) [n] locomotor_activity 101423	KOMP	123	both	66-72wks	N=8	2021

JaxKOMP-LAP:119	JaxKOMP-LAP	observation (SHIRPA)	(none)	gait (fluidity) gait 101424 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:123	JaxKOMP-LAP	observation (SHIRPA)	(none)	unexpected behaviors (circling, head bobbing, jumping, retropulsion) unexpected_behaviors 101428 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:129	JaxKOMP-LAP	observation (SHIRPA)	(none)	head bobbing head_bobbing 101434 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:131	JaxKOMP-LAP	grip strength	(none)	forelimb grip strength by trial [g] front_paws forelimb_strength 101561 trial1 trial2 trial3	KOMP	119	both	66-72wks	N=8	2021

JaxKOMP-LAP:134	JaxKOMP-LAP	grip strength	(none)	forelimb and hindlimb grip strength by trial [g] all_paws forehind_limb_strength 101564 trial1 trial2 trial3	KOMP	119	both	66-72wks	N=8	2021

JaxKOMP-LAP:138	JaxKOMP-LAP	grip strength	(none)	forelimb grip strength (mean of trials) [g] font_paws_mean forelimb_grip_mean 101571 average average normalized to bw	KOMP	119	both	66-72wks	N=8	2021

JaxKOMP-LAP:140	JaxKOMP-LAP	grip strength	(none)	forelimb and hindlimb grip strength (mean of trials) [g] all_paws_mean fore_and_hind_limb_grip_mean 101572 average average normalized to bw	KOMP	119	both	66-72wks	N=8	2021

JaxKOMP-LAP:162	JaxKOMP-LAP	light-dark box	(none)	time mobile in light zone, 20 min test [s] light_mobile_LD left_side_mobile_time_spent 101483	KOMP	124	both	67-73wks	N=8	2021

JaxKOMP-LAP:164	JaxKOMP-LAP	light-dark box	(none)	time mobile in dark zone, 20 min test [s] dark_mobile_LD right_side_mobile_time_spent 101485	KOMP	124	both	67-73wks	N=8	2021

JaxKOMP-LAP:168	JaxKOMP-LAP	acoustic startle test	(none)	average baseline movement during background noise [mV] avg_background bn_avg 101508	KOMP	3	both	68-72wks	N=9	2018

JaxKOMP-LAP:169	JaxKOMP-LAP	acoustic startle test	(none)	average startle response to pre-pulse [mV] avg_pp ppN_avg 101509 pp1 pp2 pp3	KOMP	3	both	68-72wks	N=9	2018

JaxKOMP-LAP:172	JaxKOMP-LAP	acoustic startle test	(none)	average startle response to full pulse (120 dB) [mV] avg_s s_avg 101507	KOMP	3	both	68-72wks	N=9	2018

JaxKOMP-LAP:173	JaxKOMP-LAP	acoustic startle test	(none)	average startle response to full pulse (120 dB) preceded by pre-pulse [mV] avg_pp_s ppN_s_avg 101510 pp1 pp2 pp3	KOMP	3	both	68-72wks	N=9	2018

JaxKOMP-LAP:179	JaxKOMP-LAP	acoustic startle test	(none)	corrected average startle response to full pulse (120 dB) minus average baseline movement during background noise [mV] avg_corrected_s corrected_s_avg 101521	KOMP	3	both	68-72wks	N=9	2018

JaxKOMP-LAP:180	JaxKOMP-LAP	acoustic startle test	(none)	corrected average startle response to pre-pulse and full pulse (120 dB) minus average startle response to same pre-pulse [mV] avg_corrected_pp_s corrected_ppN_avg 101522 pp1 pp2 pp3	KOMP	3	both	68-72wks	N=9	2018

JaxKOMP-LAP:187	JaxKOMP-LAP	acoustic startle test	(none)	maximum baseline movement during background noise [mV] max_background bn 101532	KOMP	3	both	68-72wks	N=9	2018

JaxKOMP-LAP:188	JaxKOMP-LAP	acoustic startle test	(none)	maximum startle response to pre-pulse [mV] max_pp ppN 101533 pp1 pp2 pp3	KOMP	3	both	68-72wks	N=9	2018

JaxKOMP-LAP:192	JaxKOMP-LAP	acoustic startle test	(none)	maximum startle response to full pulse (120 dB) preceded by pre-pulse [mV] max_pp_s ppN_s 101537 74 dB 78 dB 82 dB	KOMP	3	both	68-72wks	N=9	2018

JaxKOMP-LAP:195	JaxKOMP-LAP	acoustic startle test	(none)	maximum percent pre-pulse inhibition to full pulse (120 dB) preceded by pre-pulse [%] max_ppi pct_ppi_ppN 101540	KOMP	3	both	68-72wks	N=9	2018

JaxKOMP-LAP:197	JaxKOMP-LAP	acoustic startle test	(none)	corrected maximum startle response to full pulse (120 dB) minus maximum baseline movement during background noise [mV] max_corrected_s corrected_s_vmax 101550	KOMP	3	both	68-72wks	N=9	2018

JaxKOMP-LAP:198	JaxKOMP-LAP	acoustic startle test	(none)	corrected maximum startle response to pre-pulse and full pulse (120 dB) minus maximum startle response to same pre-pulse [mV] max_corrected_pp_s corrected_ppN_vmax 101551 pp1 pp2 pp3	KOMP	3	both	68-72wks	N=9	2018

Filter Table Results