MPD: Phenotype measures mapped to MA:0000396, male reproductive system

Phenotype measures in Shorter6 associated with ontology term
MA:0000396 'male reproductive system'

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All measures in this list are mapped to the ontology descendants of MA:0000396. None are mapped to MA:0000396 directly.

MA:0002765 male germ cell

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
Shorter6:1	Shorter6	microscopy	(none)	percentage of sperm that are motile [%] sperm_motile 65601 10 min 30 min 60 min 90 min 120 min	CC	12	m	15-33wks	N=3	2019

Shorter6:6	Shorter6	microscopy	(none)	percentage of motile sperm that are 'vigorous' [%] sperm_vigor 65606 10 min 30 min 60 min 90 min 120 min	CC	12	m	15-33wks	N=3	2019

Shorter6:11	Shorter6	microscopy	(none)	percentage of motile sperm that are 'progressive' [%] sperm_prog 65611 10 min 30 min 60 min 90 min 120 min	CC	12	m	15-33wks	N=3	2019

Shorter6:16	Shorter6	microscopy	(none)	percentage of motile sperm that are 'hyperactivated' [%] sperm_hyper 65616 10 min 30 min 60 min 90 min 120 min	CC	12	m	15-33wks	N=3	2019

Shorter6:21	Shorter6	microscopy	(none)	percentage of motile sperm that are 'intermediate' [%] sperm_int 65621 10 min 30 min 60 min 90 min 120 min	CC	12	m	15-33wks	N=3	2019

Shorter6:26	Shorter6	microscopy	(none)	percentage of motile sperm that are 'slow' [%] sperm_slow 65626 10 min 30 min 60 min 90 min 120 min	CC	12	m	15-33wks	N=3	2019

Shorter6:31	Shorter6	microscopy	(none)	percentage of motile sperm that are 'weak' [%] sperm_weak 65631 10 min 30 min 60 min 90 min 120 min	CC	12	m	15-33wks	N=3	2019

Shorter6:36	Shorter6	microscopy	(none)	sperm mean path velocity [µm/s] sperm_VAP 65636 10 min 30 min 60 min 90 min 120 min	CC	12	m	15-33wks	N=3	2019

Shorter6:41	Shorter6	microscopy	(none)	sperm mean straight line velocity [µm/s] sperm_VSL 65641 10 min 30 min 60 min 90 min 120 min	CC	12	m	15-33wks	N=3	2019

Shorter6:46	Shorter6	microscopy	(none)	sperm mean curvilinear velocity [µm/s] sperm_VCL 65646 10 min 30 min 60 min 90 min 120 min	CC	12	m	15-33wks	N=3	2019

Shorter6:51	Shorter6	microscopy	(none)	sperm mean lateral head displacement (amplitude) [µm] sperm_ALH 65651 10 min 30 min 60 min 90 min 120 min	CC	12	m	15-33wks	N=3	2019

Shorter6:56	Shorter6	microscopy	(none)	sperm mean cross beat frequency [Hz] sperm_BCF 65656 10 min 30 min 60 min 90 min 120 min	CC	12	m	15-33wks	N=3	2019

Shorter6:61	Shorter6	microscopy	(none)	sperm mean straightness [ratio] sperm_STR 65661 10 min 30 min 60 min 90 min 120 min	CC	12	m	15-33wks	N=3	2019

Shorter6:66	Shorter6	microscopy	(none)	sperm mean linearity [ratio] sperm_LIN 65666 10 min 30 min 60 min 90 min 120 min	CC	12	m	15-33wks	N=3	2019

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