MPD: Phenotype measures mapped to MA:0000189, hippocampal formation

Phenotype measures associated with ontology term
MA:0000189 'hippocampal formation'

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All measures in this list are mapped to the ontology descendants of MA:0000189. None are mapped to MA:0000189 directly.

MA:0000191 hippocampus
MA:0000946 dentate gyrus granule cell layer

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
Crusio1:48	Crusio1	histopathology	(none)	total hippocampus size (arbitrary units) hippocampus 62048 left right	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:50	Crusio1	histopathology	(none)	size of intra- and infrapyramidal mossy fibers (arbitrary units) iipmf 62050 left right	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:52	Crusio1	histopathology	(none)	percentage of hippocampus that is Intra- and infrapyramidal mossy fibers [%] iipmf_pct 62052 left right mean	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:55	Crusio1	histopathology	(none)	size of hilus (arbitrary units) hilus 62055 left right	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:57	Crusio1	histopathology	(none)	percentage of hippocampus that is hilus [%] hilus_pct 62057 left right mean	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:60	Crusio1	histopathology	(none)	size of suprapyramidal mossy fibers (arbitrary units) supra 62060 left right	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:62	Crusio1	histopathology	(none)	percentage of hippocampus that is suprapyramidal mossy fibers [%] supra_pct 62062 left right mean	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:65	Crusio1	histopathology	(none)	size of stratum pyramidale (arbitrary units) pyr 62065 left right	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:67	Crusio1	histopathology	(none)	percentage of hippocampus that is stratum pyramidale [%] pyr_pct 62067 left right mean	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:70	Crusio1	histopathology	(none)	size of stratum oriens (arbitrary units) oriens 62070 left right	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:72	Crusio1	histopathology	(none)	percentage of hippocampus that is stratum oriens [%] oriens_pct 62072 left right mean	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:75	Crusio1	histopathology	(none)	size of stratum radiatum (arbitrary units) rad 62075 left right	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:77	Crusio1	histopathology	(none)	percentage of hippocampus that is stratum radiatum [%] rad_pct 62077 left right mean	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:80	Crusio1	histopathology	(none)	size of stratum lacunosum-moleculare (arbitrary units) lacun 62080 left right	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:82	Crusio1	histopathology	(none)	percentage of hippocampus that is stratum lacunosum-moleculare [%] lacun_pct 62082 left right mean	BXD w/par	55	both	12-16wks	N=4	2018

Mooney1:2	Mooney1	protein activity assessment	(none)	dorsal hippocampus acetylcholinesterase activity [mU/mL] DH_AChE 110425	inbred	20	m	8-12wks	N=6	2019

Mooney1:3	Mooney1	protein activity assessment	(none)	ventral hippocampus acetylcholinesterase activity [mU/mL] VH_AChE 110426	inbred	20	m	8-12wks	N=6	2019

Rhodes1:3	Rhodes1	microscopy	exercise	hippocampus: volume of dentate gyrus [mm³] DG_vol 34603 control with running wheel	inbred	12	both	15wks	N=4	2010

Rhodes1:5	Rhodes1	microscopy	exercise	hippocampus: number of new neurons in dentate gyrus [n] DG_neurons 34605 control with running wheel	inbred	12	both	15wks	N=4	2010

Rhodes1:7	Rhodes1	microscopy	exercise	hippocampus: density of new neurons in dentate gyrus [n/mm³] DG_density 34607 control with running wheel	inbred	12	both	15wks	N=4	2010

Schalkwyk2:1	Schalkwyk2	RNA expression profiling	(none)	miR-15b, hippocampal microRNA expression, relative miR15b 48101	BXD w/par	26	m	15-16wks	N=4	2012

Schalkwyk2:2	Schalkwyk2	RNA expression profiling	(none)	miR-31, hippocampal microRNA expression, relative miR31 48102	BXD w/par	26	m	15-16wks	N=4	2012

Schalkwyk2:3	Schalkwyk2	RNA expression profiling	(none)	miR-34c, hippocampal microRNA expression, relative miR34c 48103	BXD w/par	26	m	15-16wks	N=4	2012

Schalkwyk2:4	Schalkwyk2	RNA expression profiling	(none)	miR-212, hippocampal microRNA expression, relative miR212 48104	BXD w/par	26	m	15-16wks	N=4	2012

Schalkwyk2:5	Schalkwyk2	RNA expression profiling	(none)	miR-301a, hippocampal microRNA expression, relative miR301a 48105	BXD w/par	26	m	15-16wks	N=4	2012

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