Project measure / variable:   Seburn1   bw_change

ID, description, units MPD:9207   bw_change   body weight   [g]  percent change  
Data set, strains Seburn1   inbred   16 strains     sex: both     age: 7-9wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Seburn1 - body weight percent change



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested15 strains16 strains
Mean of the strain means-5.32   g -4.42   g
Median of the strain means-4.96   g -3.98   g
SD of the strain means± 3.95 ± 3.90
Coefficient of variation (CV)-0.742 -0.883
Min–max range of strain means-12.9   –   2.21   g -11.5   –   3.30   g
Mean sample size per strain8.0   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 37.052 37.052 1.6666 0.1981
strain 14 2541.6346 181.5453 8.1658 < 0.0001
sex:strain 14 999.7011 71.4072 3.2118 0.0001
Residuals 210 4668.8162 22.2325


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f -4.96 3.9   8 1.38 -0.786 -12.2, -1.5 0.09
129S1/SvImJ m -11.5 4.92   8 1.74 -0.429 -22.1, -7.6 -1.81
A/J f -7.45 4.78   8 1.69 -0.641 -16.6, -1.8 -0.54
A/J m -6.86 1.7   8 0.6 -0.247 -8.7, -4.4 -0.63
AKR/J f -12.9 5.33   8 1.89 -0.414 -20.0, -6.3 -1.92
AKR/J m -8.38 2.95   8 1.04 -0.353 -13.9, -5.2 -1.01
BALB/cJ f -10.2 16.7   8 5.92 -1.64 -34.1, 14.6 -1.24
BALB/cJ m -1.3 1.8   8 0.637 -1.39 -4.9, 0.4 0.8
BTBR T+ Itpr3tf/J f -3.95 3.13   8 1.11 -0.793 -10.1, -0.9 0.35
BTBR T+ Itpr3tf/J m -5.17 3.09   8 1.09 -0.598 -11.2, -1.0 -0.19
C3H/HeJ f -4.23 1.68   8 0.595 -0.398 -6.9, -2.2 0.28
C3H/HeJ m -2.25 2.38   8 0.84 -1.06 -6.8, 0.9 0.56
C57BL/6J f -2.39 3.16   8 1.12 -1.32 -5.9, 2.8 0.74
C57BL/6J m -6.46 1.43   8 0.505 -0.221 -8.4, -4.4 -0.52
CAST/EiJ f -7.61 4.19   8 1.48 -0.551 -13.1, -1.7 -0.58
CAST/EiJ m -5.12 4.25   8 1.5 -0.83 -11.4, 2.2 -0.18
CBA/J f 1.09 2.8   8 0.99 2.57 -2.3, 5.2 1.62
CBA/J m -2.45 2.14   8 0.756 -0.873 -5.3, -0.4 0.5
FVB/NJ f -4.89 7.0   8 2.48 -1.43 -19.3, 3.6 0.11
FVB/NJ m -0.025 5.6   8 1.98 -224.0 -12.1, 4.7 1.13
LP/J f -9.4 4.01   8 1.42 -0.427 -15.1, -2.3 -1.03
LP/J m -7.64 1.44   8 0.509 -0.188 -9.6, -5.8 -0.82
NOD/ShiLtJ f -5.58 4.01   8 1.42 -0.719 -13.4, -1.0 -0.07
NOD/ShiLtJ m -2.83 2.29   8 0.81 -0.811 -7.4, -0.4 0.41
NZB/BlNJ f -4.52 1.85   8 0.656 -0.41 -7.4, -1.1 0.2
NZB/BlNJ m -9.87 1.94   8 0.684 -0.196 -13.5, -7.2 -1.4
PL/J f -5.0 5.07   8 1.79 -1.01 -10.6, 3.0 0.08
PL/J m -1.44 1.36   8 0.482 -0.949 -3.6, 0.5 0.76
SJL/J m -2.73 4.93   8 1.74 -1.81 -11.2, 3.1 0.43
SWR/J f 2.21 4.68   8 1.65 2.11 -2.4, 11.1 1.91
SWR/J m 3.3 4.07   8 1.44 1.23 -4.6, 8.5 1.98


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f -4.9625 1.6671 -1.6762 -8.2488
129S1/SvImJ m -11.45 1.6671 -8.1637 -14.7363
A/J f -7.45 1.6671 -4.1637 -10.7363
A/J m -6.8625 1.6671 -3.5762 -10.1488
AKR/J f -12.875 1.6671 -9.5887 -16.1613
AKR/J m -8.375 1.6671 -5.0887 -11.6613
BALB/cJ f -10.1875 1.6671 -6.9012 -13.4738
BALB/cJ m -1.3 1.6671 1.9863 -4.5863
BTBR T+ Itpr3tf/J f -3.95 1.6671 -0.6637 -7.2363
BTBR T+ Itpr3tf/J m -5.175 1.6671 -1.8887 -8.4613
C3H/HeJ f -4.225 1.6671 -0.9387 -7.5113
C3H/HeJ m -2.25 1.6671 1.0363 -5.5363
C57BL/6J f -2.3875 1.6671 0.8988 -5.6738
C57BL/6J m -6.4625 1.6671 -3.1762 -9.7488
CAST/EiJ f -7.6125 1.6671 -4.3262 -10.8988
CAST/EiJ m -5.125 1.6671 -1.8387 -8.4113
CBA/J f 1.0875 1.6671 4.3738 -2.1988
CBA/J m -2.45 1.6671 0.8363 -5.7363
FVB/NJ f -4.8875 1.6671 -1.6012 -8.1738
FVB/NJ m -0.025 1.6671 3.2613 -3.3113
LP/J f -9.4 1.6671 -6.1137 -12.6863
LP/J m -7.6375 1.6671 -4.3512 -10.9238
NOD/ShiLtJ f -5.575 1.6671 -2.2887 -8.8613
NOD/ShiLtJ m -2.825 1.6671 0.4613 -6.1113
NZB/BlNJ f -4.525 1.6671 -1.2387 -7.8113
NZB/BlNJ m -9.875 1.6671 -6.5887 -13.1613
PL/J f -5.0 1.6671 -1.7137 -8.2863
PL/J m -1.4375 1.6671 1.8488 -4.7238
SWR/J f 2.2125 1.6671 5.4988 -1.0738
SWR/J m 3.3 1.6671 6.5863 0.0137


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both -8.2062 1.1788 -5.8825 -10.53
A/J both -7.1562 1.1788 -4.8325 -9.48
AKR/J both -10.625 1.1788 -8.3012 -12.9488
BALB/cJ both -5.7438 1.1788 -3.42 -8.0675
BTBR T+ Itpr3tf/J both -4.5625 1.1788 -2.2387 -6.8863
C3H/HeJ both -3.2375 1.1788 -0.9137 -5.5613
C57BL/6J both -4.425 1.1788 -2.1012 -6.7488
CAST/EiJ both -6.3687 1.1788 -4.045 -8.6925
CBA/J both -0.6812 1.1788 1.6425 -3.005
FVB/NJ both -2.4562 1.1788 -0.1325 -4.78
LP/J both -8.5187 1.1788 -6.195 -10.8425
NOD/ShiLtJ both -4.2 1.1788 -1.8762 -6.5238
NZB/BlNJ both -7.2 1.1788 -4.8762 -9.5238
PL/J both -3.2187 1.1788 -0.895 -5.5425
SWR/J both 2.7563 1.1788 5.08 0.4325




  GWAS USING LINEAR MIXED MODELS