Project measure / variable:   CSNA03   dist_l60_cocaine_do_d12

ID, description, units MPD:90429   dist_l60_cocaine_do_d12   distance traveled, last 60 min (post-injection), on successive days, cocaine sensitization, DO   [cm]  day 12 (saline)  
cocaine study
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 8-21wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means11513.0   cm 11233.0   cm
Median of the strain means11247.0   cm 10756.0   cm
SD of the strain means± 8825.0 ± 8580.0
Coefficient of variation (CV)0.7665 0.7638
Min–max range of strain means670.7   –   23546.0   cm 1254.0   –   26765.0   cm
Mean sample size per strain26.9   mice 27.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 22604246.1941 22604246.1941 0.4427 0.5061
strain 8 9092193453.3014 1136524181.6627 22.2606 < 0.0001
sex:strain 8 559282307.4049 69910288.4256 1.3693 0.2076
Residuals 471 24047149648.4253 51055519.4234


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 670.7 1391.0   6 568.0 2.0743 -1.23
129S1/SvImJ m 1254.0 1566.0   6 639.5 1.2493 73.39, 4260.0 -1.16
A/J f 2244.0 912.2   12 263.3 0.4064 1071.0, 3940.0 -1.05
A/J m 3106.0 2067.0   12 596.6 0.6654 1126.0, 8606.0 -0.95
C57BL/6J f 11247.0 1869.0   5 835.7 0.1662 8961.0, 13043.0 -0.03
C57BL/6J m 10756.0 4179.0   7 1579.0 0.3885 7668.0, 17822.0 -0.06
CAST/EiJ f 23546.0 11148.0   6 4551.0 0.4735 12193.0, 43820.0 1.36
CAST/EiJ m 15501.0 3281.0   5 1467.0 0.2116 12139.0, 20616.0 0.5
J:DO f 8062.0 6388.0   185 469.7 0.7924 365.6, 46427.0 -0.39
J:DO m 8773.0 6710.0   189 488.1 0.7649 1043.0, 53969.0 -0.29
NOD/ShiLtJ f 15655.0 7358.0   6 3004.0 0.47 8045.0, 28169.0 0.47
NOD/ShiLtJ m 17980.0 10233.0   6 4178.0 0.5691 7284.0, 32628.0 0.79
NZO/HlLtJ f 1831.0 613.4   6 250.4 0.335 1404.0, 2995.0 -1.1
NZO/HlLtJ m 1523.0 394.2   7 149.0 0.2588 1088.0, 2224.0 -1.13
PWK/PhJ f 19260.0 7000.0   9 2333.0 0.3634 9138.0, 30868.0 0.88
PWK/PhJ m 26765.0 28231.0   8 9981.0 1.0548 7599.0, 94420.0 1.81
WSB/EiJ f 21099.0 7988.0   7 3019.0 0.3786 11198.0, 36952.0 1.09
WSB/EiJ m 15441.0 3175.0   7 1200.0 0.2057 10802.0, 18473.0 0.49


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 670.7333333333 2917.0624328654 6402.8001065825 -5061.333439916
129S1/SvImJ m 1253.8316666667 2917.0624328655 6985.898439916 -4478.2351065827
A/J f 2244.3333333333 2062.6746274237 6297.5166189119 -1808.8499522453
A/J m 3106.0 2062.6746274237 7159.1832855786 -947.1832855787
C57BL/6J f 11246.8 3195.4817922625 17525.9645456689 4967.6354543311
C57BL/6J m 10756.2857142857 2700.6750326383 16063.1483461984 5449.4230823731
CAST/EiJ f 23546.1666666671 2917.0624328655 29278.2334399164 17814.0998934178
CAST/EiJ m 15500.6000000006 3195.4817922625 21779.7645456695 9221.4354543318
J:DO f 8062.0589189189 525.3339706007 9094.3472113506 7029.7706264873
J:DO m 8773.0264550265 519.7451523625 9794.3326447222 7751.7202653308
NOD/ShiLtJ f 15655.0000000001 2917.0624328654 21387.0667732494 9922.9332267508
NOD/ShiLtJ m 17980.5000000001 2917.0624328654 23712.5667732493 12248.4332267508
NZO/HlLtJ f 1830.8333333333 2917.0624328654 7562.9001065826 -3901.233439916
NZO/HlLtJ m 1523.0 2700.6750326382 6829.8626319126 -3783.8626319125
PWK/PhJ f 19259.8888888889 2381.7715027873 23940.1018108964 14579.6759668815
PWK/PhJ m 26765.375 2526.2501712867 31729.4904418226 21801.2595581775
WSB/EiJ f 21098.5714285714 2700.6750326382 26405.434060484 15791.7087966589
WSB/EiJ m 15440.5714285714 2700.6750326382 20747.434060484 10133.7087966589


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 962.2825 2062.6746274237 5015.4657855786 -3090.9007855787
A/J both 2675.1666666666 1458.5312164327 5541.2000532912 -190.866719958
C57BL/6J both 11001.5428571429 2091.9338849852 15112.2209759444 6890.8647383413
CAST/EiJ both 19523.3833333339 2163.351400138 23774.3978265042 15272.3688401636
J:DO both 8417.5426869727 369.4965507523 9143.6083609655 7691.4770129799
NOD/ShiLtJ both 16817.7500000001 2062.6746274237 20870.9332855787 12764.5667144214
NZO/HlLtJ both 1676.9166666667 1987.6430054936 5582.6618096253 -2228.8284762919
PWK/PhJ both 23012.6319444445 1735.9993821583 26423.8939951768 19601.3698937121
WSB/EiJ both 18269.5714285714 1909.6656293597 22022.0899824223 14517.0528747206




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA