Project measure / variable:   CSNA03   dist_l60_cont_in_d11

ID, description, units MPD:90418   dist_l60_cont_in_d11   distance traveled, last 60 min (post-injection), on successive days, saline control, founders   [cm]  day 11  
Data set, strains CSNA03   inbred w/CC8   9 strains     sex: both     age: 8-14wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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CSNA03 - distance traveled, last 60 min (post-injection), on successive days, saline control, founders day 11



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means11130.0   cm 6789.0   cm
Median of the strain means8275.0   cm 6390.0   cm
SD of the strain means± 9880.0 ± 5260.0
Coefficient of variation (CV)0.8877 0.7748
Min–max range of strain means388.5   –   24863.0   cm 270.8   –   14209.0   cm
Mean sample size per strain6.7   mice 6.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 639440715.0433 639440715.0433 9.432 0.0027
strain 8 5755283674.3028 719410459.2878 10.6116 < 0.0001
sex:strain 8 1068343951.4659 133542993.9332 1.9698 0.0577
Residuals 102 6915071024.9281 67794813.9699


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 388.5 461.9   8 163.3 1.1889 -1.09
129S1/SvImJ m 270.8 390.5   8 138.1 1.442 -1.24
A/J f 1689.0 1578.0   5 705.5 0.934 -0.96
A/J m 1112.0 550.1   8 194.5 0.4948 213.6, 2020.0 -1.08
C57BL/6J f 8275.0 1657.0   7 626.2 0.2002 5332.0, 9984.0 -0.29
C57BL/6J m 5955.0 2001.0   6 817.0 0.3361 3745.0, 8963.0 -0.16
CAST/EiJ f 18269.0 6659.0   7 2517.0 0.3645 11817.0, 31719.0 0.72
CAST/EiJ m 12083.0 5810.0   7 2196.0 0.4809 7370.0, 23640.0 1.01
DBA/2J f 4153.0 1794.0   3 1036.0 0.4318 2553.0, 6092.0 -0.71
DBA/2J m 9703.0 6070.0   2   4292.0 0.6256 5411.0, 13995.0 0.55
NOD/ShiLtJ f 24863.0 32034.0   5 14326.0 1.2884 6612.0, 80827.0 1.39
NOD/ShiLtJ m 6390.0 3203.0   5 1432.0 0.5012 2001.0, 10150.0 -0.08
NZO/HlLtJ f 1783.0 2437.0   10 770.7 1.3669 273.4, 8602.0 -0.95
NZO/HlLtJ m 599.6 432.9   9 144.3 0.722 122.2, 1313.0 -1.18
PWK/PhJ f 17071.0 6128.0   8 2167.0 0.359 9467.0, 27019.0 0.6
PWK/PhJ m 14209.0 7936.0   8 2806.0 0.5585 8020.0, 32357.0 1.41
WSB/EiJ f 23675.0 15067.0   7 5695.0 0.6364 12645.0, 56355.0 1.27
WSB/EiJ m 10779.0 3774.0   7 1426.0 0.3501 6177.0, 16572.0 0.76


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 388.536125 2911.0739850157 6162.6375716045 -5385.5653216045
129S1/SvImJ m 270.834375 2911.0739850157 6044.9358216045 -5503.2670716045
A/J f 1688.98 3682.2496919651 8992.7048048573 -5614.7448048573
A/J m 1111.6125 2911.0739850157 6885.7139466045 -4662.4889466045
C57BL/6J f 8275.1428571429 3112.068994137 14447.9169513342 2102.3687629515
C57BL/6J m 5955.0 3361.4186977595 12622.3580490506 -712.3580490506
CAST/EiJ f 18268.7142857143 3112.068994137 24441.4883799056 12095.9401915229
CAST/EiJ m 12083.1428571429 3112.068994137 18255.9169513342 5910.3687629515
DBA/2J f 4153.3333333333 4753.763911186 13582.4015114981 -5275.7348448315
DBA/2J m 9703.0 5822.1479700315 21251.202893209 -1845.202893209
NOD/ShiLtJ f 24862.9999999999 3682.249691965 32166.7248048572 17559.2751951427
NOD/ShiLtJ m 6389.9999999999 3682.2496919651 13693.7248048573 -913.7248048574
NZO/HlLtJ f 1782.89 2603.7437272106 6947.403337435 -3381.623337435
NZO/HlLtJ m 599.6111111111 2744.5868737872 6043.4861619819 -4844.2639397597
PWK/PhJ f 17070.875 2911.0739850157 22844.9764466045 11296.7735533955
PWK/PhJ m 14209.375 2911.0739850157 19983.4764466045 8435.2735533955
WSB/EiJ f 23675.1428571429 3112.068994137 29847.9169513342 17502.3687629515
WSB/EiJ m 10778.7142857143 3112.068994137 16951.4883799057 4605.940191523


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 329.68525 2058.4401553404 4412.5915381531 -3753.2210381531
A/J both 1400.29625 2346.9828791564 6055.5256627349 -3254.9331627349
C57BL/6J both 7115.0714285714 2290.4207629776 11658.1101520516 2572.0327050913
CAST/EiJ both 15175.9285714286 2200.5650892747 19540.7389921639 10811.1181506932
DBA/2J both 6928.1666666667 3758.1803545145 14382.4995806704 -526.1662473371
NOD/ShiLtJ both 15626.4999999999 2603.7437272106 20791.0133374349 10461.986662565
NZO/HlLtJ both 1191.2505555556 1891.5759636315 4943.1825106301 -2560.681399519
PWK/PhJ both 15640.125 2058.4401553404 19723.0312881531 11557.2187118469
WSB/EiJ both 17226.9285714286 2200.5650892747 21591.7389921639 12862.1181506932




  GWAS USING LINEAR MIXED MODELS