Project measure / variable:   CSNA03   dist_l60_cont_in_d7

ID, description, units MPD:90406   dist_l60_cont_in_d7   distance traveled, last 60 min (post-injection), on successive days, saline control, founders   [cm]  day 7  
Data set, strains CSNA03   inbred w/CC8   9 strains     sex: both     age: 8-14wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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CSNA03 - distance traveled, last 60 min (post-injection), on successive days, saline control, founders day 7



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means10435.0   cm 7444.0   cm
Median of the strain means6957.0   cm 6394.0   cm
SD of the strain means± 9679.0 ± 5839.0
Coefficient of variation (CV)0.9276 0.7844
Min–max range of strain means240.8   –   25891.0   cm 293.6   –   15741.0   cm
Mean sample size per strain6.9   mice 6.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 223525978.716 223525978.716 4.2315 0.0422
strain 8 6448617043.0514 806077130.3814 15.2595 < 0.0001
sex:strain 8 622479167.9196 77809895.9899 1.473 0.176
Residuals 104 5493768457.5267 52824696.707


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 240.8 268.1   8 94.8 1.1133 -1.05
129S1/SvImJ m 293.6 435.6   8 154.0 1.4837 -1.22
A/J f 1371.0 1151.0   7 435.2 0.84 38.1, 3358.0 -0.94
A/J m 1912.0 1595.0   8 563.8 0.8339 647.6, 5471.0 -0.95
C57BL/6J f 6957.0 1528.0   7 577.5 0.2196 5047.0, 9189.0 -0.36
C57BL/6J m 5397.0 1845.0   6 753.4 0.3419 2024.0, 7167.0 -0.35
CAST/EiJ f 18184.0 3520.0   7 1330.0 0.1936 14667.0, 23699.0 0.8
CAST/EiJ m 13599.0 5975.0   7 2258.0 0.4394 5904.0, 23958.0 1.05
DBA/2J f 4005.0 2110.0   3 1218.0 0.5267 1944.0, 6160.0 -0.66
DBA/2J m 6394.0 6954.0   2   4917.0 1.0875 1477.0, 11311.0 -0.18
NOD/ShiLtJ f 25891.0 31584.0   5 14125.0 1.2199 6992.0, 81349.0 1.6
NOD/ShiLtJ m 11866.0 10621.0   5 4750.0 0.8951 3267.0, 29974.0 0.76
NZO/HlLtJ f 1140.0 636.3   10 201.2 0.5579 229.6, 2174.0 -0.96
NZO/HlLtJ m 669.1 427.2   9 142.4 0.6384 39.078, 1379.0 -1.16
PWK/PhJ f 16019.0 4133.0   8 1461.0 0.258 11330.0, 20924.0 0.58
PWK/PhJ m 15741.0 6591.0   8 2330.0 0.4187 9702.0, 30623.0 1.42
WSB/EiJ f 20104.0 5521.0   7 2087.0 0.2746 15152.0, 31240.0 1.0
WSB/EiJ m 11124.0 2455.0   7 927.7 0.2207 7069.0, 14684.0 0.63


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 240.84125 2569.6472692518 5336.5482147528 -4854.8657147529
129S1/SvImJ m 293.6 2569.6472692518 5389.3069647528 -4802.1069647529
A/J f 1370.7428571429 2747.0684818285 6818.2827444294 -4076.7970301437
A/J m 1912.175 2569.6472692518 7007.8819647528 -3183.5319647528
C57BL/6J f 6957.2857142857 2747.0684818285 12404.8256015722 1509.7458269992
C57BL/6J m 5397.1666666666 2967.1730852499 11281.1822422896 -486.8489089564
CAST/EiJ f 18183.5714285714 2747.0684818285 23631.1113158579 12736.0315412849
CAST/EiJ m 13598.8571428571 2747.0684818285 19046.3970301436 8151.3172555706
DBA/2J f 4005.0 4196.2164190688 12326.2546282606 -4316.2546282606
DBA/2J m 6394.0 5139.2945385037 16585.4139295057 -3797.4139295057
NOD/ShiLtJ f 25890.6000000001 3250.3752616271 32336.216118961 19444.9838810391
NOD/ShiLtJ m 11865.8000000001 3250.3752616271 18311.416118961 5420.1838810392
NZO/HlLtJ f 1140.45 2298.3623888975 5698.1888666426 -3417.2888666426
NZO/HlLtJ m 669.1308888889 2422.6866791273 5473.4094885105 -4135.1477107328
PWK/PhJ f 16018.625 2569.6472692518 21114.3319647528 10922.9180352472
PWK/PhJ m 15741.125 2569.6472692518 20836.8319647528 10645.4180352472
WSB/EiJ f 20104.4285714286 2747.0684818285 25551.9684587151 14656.888684142
WSB/EiJ m 11123.7142857143 2747.0684818285 16571.2541730008 5676.1743984277


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 267.220625 1817.0150093455 3870.4295747162 -3335.9883247163
A/J both 1641.4589285714 1880.7892181362 5371.1345275414 -2088.2166703986
C57BL/6J both 6177.2261904762 2021.7876595779 10186.5069900009 2167.9453909514
CAST/EiJ both 15891.2142857143 1942.4707518847 19743.2066807988 12039.2218906298
DBA/2J both 5199.5 3317.4003598133 11778.0294038803 -1379.0294038803
NOD/ShiLtJ both 18878.2000000001 2298.3623888975 23435.9388666427 14320.4611333575
NZO/HlLtJ both 904.7904444444 1669.7215648065 4215.9109662349 -2406.330077346
PWK/PhJ both 15879.875 1817.0150093455 19483.0839497163 12276.6660502837
WSB/EiJ both 15614.0714285714 1942.4707518847 19466.0638236559 11762.0790334869




  GWAS USING LINEAR MIXED MODELS