Project measure / variable:   CSNA03   dist_l60_cocaine_do_d5

ID, description, units MPD:90405   dist_l60_cocaine_do_d5   distance traveled, last 60 min (post-injection), on successive days, cocaine sensitization, DO   [cm]  day 5  
cocaine study
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 8-21wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means20471.0   cm 20063.0   cm
Median of the strain means15335.0   cm 20463.0   cm
SD of the strain means± 15134.0 ± 14038.0
Coefficient of variation (CV)0.7393 0.6997
Min–max range of strain means1768.0   –   42965.0   cm 2061.0   –   39898.0   cm
Mean sample size per strain27.0   mice 27.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1570831155.9674 1570831155.9674 10.2807 0.0014
strain 8 26118457501.4281 3264807187.6785 21.3674 < 0.0001
sex:strain 8 1684464536.2449 210558067.0306 1.3781 0.2036
Residuals 474 72424246920.4111 152793769.8743


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 4319.0 10070.0   6 4111.0 2.3314 -1.07
129S1/SvImJ m 2061.0 2808.0   6 1146.0 1.3621 73.13, 7613.0 -1.28
A/J f 1768.0 1309.0   12 377.9 0.7404 165.1, 4494.0 -1.24
A/J m 2491.0 2728.0   12 787.5 1.0953 62.23, 9653.0 -1.25
C57BL/6J f 14305.0 7432.0   6 3034.0 0.5195 -0.41
C57BL/6J m 16660.0 8343.0   7 3153.0 0.5008 5685.0, 28572.0 -0.24
CAST/EiJ f 35313.0 15056.0   6 6146.0 0.4263 26035.0, 64914.0 0.98
CAST/EiJ m 34122.0 12202.0   5 5457.0 0.3576 13438.0, 43690.0 1.0
J:DO f 15335.0 12131.0   185 891.9 0.791 494.7, 51223.0 -0.34
J:DO m 20463.0 13942.0   190 1011.0 0.6813 245.6, 67271.0 0.03
NOD/ShiLtJ f 26376.0 7224.0   6 2949.0 0.2739 17892.0, 34479.0 0.39
NOD/ShiLtJ m 29863.0 11524.0   6 4705.0 0.3859 13707.0, 46028.0 0.7
NZO/HlLtJ f 7934.0 3209.0   6 1310.0 0.4044 2442.0, 10492.0 -0.83
NZO/HlLtJ m 6741.0 3761.0   7 1422.0 0.5579 3008.0, 13678.0 -0.95
PWK/PhJ f 35928.0 8794.0   9 2931.0 0.2448 21124.0, 48744.0 1.02
PWK/PhJ m 39898.0 10770.0   9 3590.0 0.2699 23600.0, 57534.0 1.41
WSB/EiJ f 42965.0 17953.0   7 6786.0 0.4179 18325.0, 66246.0 1.49
WSB/EiJ m 28266.0 12897.0   7 4874.0 0.4562 10950.0, 43802.0 0.58


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 4319.1471666669 5046.3480173667 14235.1269706138 -5596.83263728
129S1/SvImJ m 2061.4216666667 5046.3480173667 11977.4014706135 -7854.5581372801
A/J f 1768.0666666668 3568.3069033073 8779.7232281464 -5243.5898948128
A/J m 2490.6866666669 3568.3069033073 9502.3432281466 -4520.9698948128
C57BL/6J f 14304.9999999999 5046.3480173667 24220.9798039467 4389.0201960531
C57BL/6J m 16659.857142857 4672.0104249254 25840.2705542896 7479.4437314244
CAST/EiJ f 35312.9999999993 5046.3480173666 45228.9798039459 25397.0201960526
CAST/EiJ m 34121.5999999992 5527.9972842664 44984.0116367738 23259.1883632245
J:DO f 15335.0767567568 908.7971553602 17120.8462295365 13549.3072839771
J:DO m 20462.9589473685 896.7595754607 22225.0747999934 18700.8430947435
NOD/ShiLtJ f 26376.3333333333 5046.3480173667 36292.3131372801 16460.3535293865
NOD/ShiLtJ m 29863.1666666667 5046.3480173667 39779.1464706135 19947.1868627199
NZO/HlLtJ f 7934.3333333332 5046.3480173667 17850.31313728 -1981.6464706136
NZO/HlLtJ m 6741.2857142858 4672.0104249255 15921.6991257184 -2439.1276971468
PWK/PhJ f 35927.5555555556 4120.3259023513 44023.9191620266 27831.1919490846
PWK/PhJ m 39897.6666666667 4120.3259023513 47994.0302731377 31801.3030601958
WSB/EiJ f 42965.0 4672.0104249255 52145.4134114326 33784.5865885674
WSB/EiJ m 28266.4285714286 4672.0104249255 37446.8419828612 19086.0151599959


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 3190.2844166668 3568.3069033073 10201.9409781465 -3821.3721448128
A/J both 2129.3766666669 2523.1740086834 7087.3665686403 -2828.6132353066
C57BL/6J both 15482.4285714285 3438.5065698277 22239.0298967452 8725.8272461117
CAST/EiJ both 34717.2999999992 3742.4718531753 42071.1874420093 27363.4125579892
J:DO both 17899.0178520626 638.3748909871 19153.4126152835 16644.6230888417
NOD/ShiLtJ both 28119.75 3568.3069033073 35131.4065614796 21108.0934385204
NZO/HlLtJ both 7337.8095238095 3438.5065698277 14094.4108491263 581.2081984927
PWK/PhJ both 37912.6111111112 2913.5103862512 43637.6047201987 32187.6175020236
WSB/EiJ both 35615.7142857143 3303.610253239 42107.2468630342 29124.1817083944




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA