Project measure / variable:   CSNA03   dist_l60_cont_in_d3

ID, description, units MPD:90394   dist_l60_cont_in_d3   distance traveled, last 60 min (post-injection), on successive days, saline control, founders   [cm]  day 3  
Data set, strains CSNA03   inbred w/CC8   9 strains     sex: both     age: 8-14wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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CSNA03 - distance traveled, last 60 min (post-injection), on successive days, saline control, founders day 3



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means10605.0   cm 7127.0   cm
Median of the strain means8375.0   cm 6637.0   cm
SD of the strain means± 9384.0 ± 6275.0
Coefficient of variation (CV)0.8849 0.8804
Min–max range of strain means400.2   –   21315.0   cm 220.7   –   16354.0   cm
Mean sample size per strain6.9   mice 6.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 291982111.2213 291982111.2213 12.3625 0.0007
strain 8 6977932746.8206 872241593.3526 36.9306 < 0.0001
sex:strain 8 395397094.0175 49424636.7522 2.0926 0.043
Residuals 103 2432693484.6511 23618383.3461


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 400.2 462.0   8 163.4 1.1545 -1.09
129S1/SvImJ m 220.7 353.9   8 125.1 1.6036 -1.1
A/J f 1357.0 1470.0   7 555.5 1.0834 63.77, 4425.0 -0.99
A/J m 1299.0 477.4   8 168.8 0.3675 604.0, 2014.0 -0.93
C57BL/6J f 8375.0 1746.0   7 660.1 0.2085 5335.0, 10928.0 -0.24
C57BL/6J m 6637.0 2090.0   5 934.5 0.3148 3384.0, 8874.0 -0.08
CAST/EiJ f 19671.0 11523.0   7 4355.0 0.5858 9038.0, 44208.0 0.97
CAST/EiJ m 12482.0 3812.0   7 1441.0 0.3054 7335.0, 19941.0 0.85
DBA/2J f 3519.0 1943.0   3 1122.0 0.5522 1385.0, 5187.0 -0.76
DBA/2J m 3032.0 2454.0   2   1736.0 0.8094 1297.0, 4768.0 -0.65
NOD/ShiLtJ f 19971.0 13170.0   5 5890.0 0.6594 10479.0, 42218.0 1.0
NOD/ShiLtJ m 8408.0 3615.0   5 1616.0 0.4299 2947.0, 13006.0 0.2
NZO/HlLtJ f 1066.0 452.0   10 142.9 0.424 359.1, 1786.0 -1.02
NZO/HlLtJ m 793.3 504.1   9 168.0 0.6354 182.6, 1647.0 -1.01
PWK/PhJ f 19767.0 3744.0   8 1324.0 0.1894 12999.0, 25397.0 0.98
PWK/PhJ m 16354.0 5381.0   8 1903.0 0.329 10218.0, 26381.0 1.47
WSB/EiJ f 21315.0 7132.0   7 2696.0 0.3346 11094.0, 32512.0 1.14
WSB/EiJ m 14921.0 4595.0   7 1737.0 0.308 9856.0, 21021.0 1.24


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 400.1995 1718.2252233819 3807.8939781788 -3007.4949781788
129S1/SvImJ m 220.662625 1718.2252233819 3628.3571031788 -3187.0318531788
A/J f 1356.6385714286 1836.8600283452 4999.6172046133 -2286.3400617561
A/J m 1299.1 1718.2252233819 4706.7944781788 -2108.5944781788
C57BL/6J f 8375.4285714286 1836.8600283452 12018.4072046133 4732.4499382439
C57BL/6J m 6637.0 2173.4020956154 10947.4304484096 2326.5695515905
CAST/EiJ f 19671.2857142857 1836.8600283452 23314.2643474703 16028.307081101
CAST/EiJ m 12481.5714285714 1836.8600283452 16124.5500617561 8838.5927953867
DBA/2J f 3519.3333333333 2805.8500403103 9084.0751138919 -2045.4084472252
DBA/2J m 3032.5 3436.4504467639 9847.8889563576 -3782.8889563575
NOD/ShiLtJ f 19971.4 2173.4020956154 24281.8304484096 15660.9695515905
NOD/ShiLtJ m 8407.8 2173.4020956154 12718.2304484096 4097.3695515905
NZO/HlLtJ f 1066.05 1536.8273600547 4113.9845999034 -1981.8845999034
NZO/HlLtJ m 793.3444444445 1619.9582760789 4006.1496094207 -2419.4607205318
PWK/PhJ f 19766.875 1718.2252233819 23174.5694781788 16359.1805218212
PWK/PhJ m 16354.375 1718.2252233819 19762.0694781788 12946.6805218212
WSB/EiJ f 21315.0 1836.8600283452 24957.9786331847 17672.0213668153
WSB/EiJ m 14920.7142857143 1836.8600283452 18563.692918899 11277.7356525296


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 310.4310625 1214.9687070591 2720.0349362322 -2099.1728112322
A/J both 1327.8692857143 1257.6120906303 3822.046253095 -1166.3076816665
C57BL/6J both 7506.2142857143 1422.825659819 10328.053401097 4684.3751703315
CAST/EiJ both 16076.4285714285 1298.8561821334 18652.4034666711 13500.453676186
DBA/2J both 3275.9166666667 2218.2192250639 7675.2313209831 -1123.3979876498
NOD/ShiLtJ both 14189.6 1536.8273600547 17237.5345999034 11141.6654000967
NZO/HlLtJ both 929.6972222222 1116.4791926912 3143.9703734722 -1284.5759290277
PWK/PhJ both 18060.625 1214.9687070591 20470.2288737322 15651.0211262678
WSB/EiJ both 18117.8571428572 1298.8561821334 20693.8320380997 15541.8822476146




  GWAS USING LINEAR MIXED MODELS