Project measure / variable:   CSNA03   dist_l60_cocaine_do_d1

ID, description, units MPD:90387   dist_l60_cocaine_do_d1   distance traveled, last 60 min (post-injection), on successive days, cocaine sensitization, DO   [cm]  day 1 (saline)  
cocaine study
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 8-21wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means11976.0   cm 9433.0   cm
Median of the strain means15207.0   cm 8081.0   cm
SD of the strain means± 7610.0 ± 6867.0
Coefficient of variation (CV)0.6354 0.728
Min–max range of strain means201.9   –   22714.0   cm 995.9   –   18320.0   cm
Mean sample size per strain26.8   mice 27.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 65118074.1211 65118074.1211 1.87 0.1721
strain 8 6300392663.3534 787549082.9192 22.6161 < 0.0001
sex:strain 8 875213560.2707 109401695.0338 3.1417 0.0018
Residuals 469 16331752564.2828 34822500.1371


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 201.9 373.2   6 152.4 1.8485 -1.55
129S1/SvImJ m 995.9 968.6   6 395.4 0.9726 -1.23
A/J f 2927.0 1349.0   12 389.3 0.4608 1519.0, 5798.0 -1.19
A/J m 3101.0 1744.0   12 503.4 0.5623 63.75, 5841.0 -0.92
C57BL/6J f 7890.0 1520.0   6 620.6 0.1927 5460.0, 9436.0 -0.54
C57BL/6J m 8081.0 1705.0   7 644.6 0.211 5357.0, 10162.0 -0.2
CAST/EiJ f 17873.0 4898.0   6 1999.0 0.274 11217.0, 24034.0 0.77
CAST/EiJ m 12751.0 2681.0   5 1199.0 0.2103 9868.0, 17033.0 0.48
J:DO f 7577.0 5236.0   183 387.1 0.6911 373.0, 37717.0 -0.58
J:DO m 7457.0 4505.0   187 329.5 0.6042 136.9, 25780.0 -0.29
NOD/ShiLtJ f 15789.0 3087.0   6 1260.0 0.1955 10378.0, 19165.0 0.5
NOD/ShiLtJ m 18000.0 3988.0   6 1628.0 0.2215 12916.0, 24546.0 1.25
NZO/HlLtJ f 15207.0 34772.0   6 14196.0 2.2866 486.1, 86181.0 0.42
NZO/HlLtJ m 1266.0 562.8   7 212.7 0.4447 725.8, 2387.0 -1.19
PWK/PhJ f 17608.0 3270.0   9 1090.0 0.1857 13143.0, 23283.0 0.74
PWK/PhJ m 18320.0 6925.0   9 2308.0 0.378 9132.0, 28995.0 1.29
WSB/EiJ f 22714.0 8053.0   7 3044.0 0.3545 13719.0, 37922.0 1.41
WSB/EiJ m 14921.0 7033.0   7 2658.0 0.4714 3931.0, 27505.0 0.8


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 201.8999999999 2409.0973460705 4935.8605763925 -4532.0605763926
129S1/SvImJ m 995.8833333333 2409.0973460705 5729.8439097258 -3738.0772430592
A/J f 2927.0833333335 1703.489069945 6274.4989587705 -420.3322921034
A/J m 3101.1458333335 1703.489069945 6448.5614587704 -246.2697921035
C57BL/6J f 7890.3333333333 2409.0973460705 12624.2939097258 3156.3727569407
C57BL/6J m 8081.142857143 2230.3907453008 12463.938710298 3698.3470039879
CAST/EiJ f 17872.6666666667 2409.0973460705 22606.6272430592 13138.7060902742
CAST/EiJ m 12750.6 2639.0339193373 17936.3939880607 7564.8060119393
J:DO f 7576.9442622951 436.2188510311 8434.1295673342 6719.758957256
J:DO m 7457.2299465241 431.5281894304 8305.1979373974 6609.2619556509
NOD/ShiLtJ f 15789.3333333334 2409.0973460705 20523.2939097259 11055.3727569409
NOD/ShiLtJ m 18000.5000000001 2409.0973460705 22734.4605763926 13266.5394236075
NZO/HlLtJ f 15206.8166666667 2409.0973460705 19940.7772430593 10472.8560902742
NZO/HlLtJ m 1265.6142857144 2230.3907453008 5648.4101388694 -3117.1815674407
PWK/PhJ f 17608.2222222223 1967.0197461886 21473.4848470935 13742.9595973512
PWK/PhJ m 18319.6666666668 1967.0197461886 22184.9292915379 14454.4040417956
WSB/EiJ f 22714.0 2230.3907453008 27096.7958531551 18331.204146845
WSB/EiJ m 14921.1428571429 2230.3907453008 19303.938710298 10538.3470039879


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 598.8916666666 1703.489069945 3946.3072921035 -2748.5239587703
A/J both 3014.1145833335 1204.5486730352 5381.0948715298 647.1342951372
C57BL/6J both 7985.7380952381 1641.5231417473 11211.3885036547 4760.0876868216
CAST/EiJ both 15311.6333333334 1786.6344093194 18822.4324597947 11800.8342068721
J:DO both 7517.0871044096 306.799390591 8119.9586414556 6914.2155673636
NOD/ShiLtJ both 16894.9166666667 1703.489069945 20242.3322921037 13547.5010412298
NZO/HlLtJ both 8236.2154761906 1641.5231417473 11461.8658846071 5010.565067774
PWK/PhJ both 17963.9444444446 1390.8930012578 20697.0978575579 15230.7910313312
WSB/EiJ both 18817.5714285715 1577.1244206979 21916.6760968937 15718.4667602492




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA