Project measure / variable:   CSNA03   dist_f30_cocaine_do_d9

ID, description, units MPD:90363   dist_f30_cocaine_do_d9   distance traveled, first 30 min (pre-injection), on successive days, cocaine group, DO   [cm]  day 9  
cocaine study
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 8-21wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means6890.0   cm 6188.0   cm
Median of the strain means6739.0   cm 6599.0   cm
SD of the strain means± 4414.0 ± 3602.0
Coefficient of variation (CV)0.6407 0.5822
Min–max range of strain means651.6   –   13358.0   cm 795.6   –   11167.0   cm
Mean sample size per strain25.7   mice 26.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2312013.7043 2312013.7043 0.1894 0.6637
strain 8 1731916510.9243 216489563.8655 17.7302 < 0.0001
sex:strain 8 79087195.0298 9885899.3787 0.8096 0.5943
Residuals 452 5519028341.0953 12210239.6927


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 651.6 1222.0   6 498.8 1.875 -1.41
129S1/SvImJ m 795.6 504.3   6 205.9 0.6338 103.1, 1484.0 -1.5
A/J f 2630.0 1446.0   12 417.5 0.5499 610.4, 5367.0 -0.97
A/J m 3019.0 1933.0   12 558.0 0.6404 -0.88
C57BL/6J f 6739.0 1694.0   5 757.6 0.2514 3889.0, 8285.0 -0.03
C57BL/6J m 6599.0 936.7   7 354.1 0.1419 5719.0, 8031.0 0.11
CAST/EiJ f 13358.0 6284.0   6 2565.0 0.4704 7946.0, 24656.0 1.47
CAST/EiJ m 8576.0 1515.0   5 677.3 0.1766 6672.0, 10876.0 0.66
J:DO f 6162.0 3763.0   174 285.2 0.6106 391.7, 21830.0 -0.16
J:DO m 6210.0 3638.0   180 271.2 0.5859 491.8, 27228.0 0.01
NOD/ShiLtJ f 11700.0 2752.0   6 1123.0 0.2352 7536.0, 16137.0 1.09
NOD/ShiLtJ m 11167.0 3098.0   6 1265.0 0.2774 8160.0, 16535.0 1.38
NZO/HlLtJ f 2215.0 1340.0   6 547.2 0.605 797.9, 4437.0 -1.06
NZO/HlLtJ m 1901.0 915.9   7 346.2 0.4818 1080.0, 3530.0 -1.19
PWK/PhJ f 9136.0 2228.0   9 742.8 0.2439 5794.0, 12167.0 0.51
PWK/PhJ m 9919.0 3920.0   9 1307.0 0.3952 5742.0, 16668.0 1.04
WSB/EiJ f 9419.0 2862.0   7 1082.0 0.3039 5583.0, 14481.0 0.57
WSB/EiJ m 7503.0 3931.0   7 1486.0 0.5239 3400.0, 15447.0 0.37


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 651.5833333334 1426.5482637406 3455.0733783748 -2151.906711708
129S1/SvImJ m 795.6 1426.5482637406 3599.0900450415 -2007.8900450414
A/J f 2629.7333333334 1008.7219509809 4612.1001551712 647.3665114956
A/J m 3018.7250000001 1008.7219509809 5001.0918218379 1036.3581781623
C57BL/6J f 6738.6 1562.7053268412 9809.6694748208 3667.5305251793
C57BL/6J m 6599.1428571429 1320.7270558667 9194.6702903545 4003.6154239313
CAST/EiJ f 13357.6666666667 1426.5482637407 16161.1567117081 10554.1766216252
CAST/EiJ m 8575.6 1562.7053268412 11646.6694748207 5504.5305251793
J:DO f 6161.8063218391 264.9033622612 6682.4013538291 5641.2112898491
J:DO m 6209.5894444444 260.4508878069 6721.4343569146 5697.7445319743
NOD/ShiLtJ f 11699.8333333333 1426.5482637406 14503.3233783748 8896.3432882919
NOD/ShiLtJ m 11167.3333333333 1426.5482637407 13970.8233783748 8363.8432882919
NZO/HlLtJ f 2215.4833333333 1426.5482637406 5018.9733783747 -588.0067117081
NZO/HlLtJ m 1901.0 1320.7270558667 4496.5274332116 -694.5274332116
PWK/PhJ f 9136.4444444444 1164.7717798726 11425.4844808857 6847.4044080032
PWK/PhJ m 9919.3333333333 1164.7717798726 12208.3733697746 7630.2932968921
WSB/EiJ f 9418.7142857143 1320.7270558667 12014.2417189259 6823.1868525027
WSB/EiJ m 7503.2857142857 1320.7270558667 10098.8131474973 4907.7582810741


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 723.5916666667 1008.7219509809 2705.9584885045 -1258.7751551711
A/J both 2824.2291666668 713.2741318703 4225.9741891875 1422.484144146
C57BL/6J both 6668.8714285715 1023.0307784515 8679.3583332621 4658.3845238808
CAST/EiJ both 10966.6333333333 1057.9565075322 13045.7571963957 8887.5094702709
J:DO both 6185.6978831418 185.7474470192 6550.7336354162 5820.6621308674
NOD/ShiLtJ both 11433.5833333333 1008.7219509809 13415.9501551711 9451.2165114956
NZO/HlLtJ both 2058.2416666667 972.0287939253 3968.4981343432 147.9851989901
PWK/PhJ both 9527.8888888889 823.6180240827 11146.484621064 7909.2931567138
WSB/EiJ both 8461.0 933.8950572999 10296.3150487796 6625.6849512204




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA