Project measure / variable:   CSNA03   vert_counts_tot_LD_do

ID, description, units MPD:90252   vert_counts_tot_LD_do   total vertical counts, 20 min test (LD box), DO   [n]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
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Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means171.0   n 218.5   n
Median of the strain means165.5   n 231.4   n
SD of the strain means± 77.58 ± 109.1
Coefficient of variation (CV)0.4538 0.4991
Min–max range of strain means17.429   –   256.0   n 29.122   –   359.9   n
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1317544.7664 1317544.7664 50.6275 < 0.0001
strain 8 9791892.0625 1223986.5078 47.0325 < 0.0001
sex:strain 8 361964.2555 45245.5319 1.7386 0.0846
Residuals 3667 95431068.0815 26024.2891


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 17.429 55.99   49 7.9983 3.2124 -1.98
129S1/SvImJ m 29.122 83.23   49 11.89 2.858 -1.74
A/J f 97.35 123.6   60 15.959 1.2698 6.0, 815.0 -0.95
A/J m 122.4 172.8   61 22.118 1.4116 8.0, 779.0 -0.88
C57BL/6J f 246.1 194.3   60 25.089 0.7897 28.0, 855.0 0.97
C57BL/6J m 331.8 188.2   59 24.501 0.5672 82.0, 836.0 1.04
CAST/EiJ f 201.7 162.8   33 28.332 0.8068 16.0, 750.0 0.4
CAST/EiJ m 281.3 220.2   30 40.197 0.7827 3.0, 836.0 0.58
J:DO f 240.8 163.3   1496 4.221 0.678 0.9
J:DO m 277.0 161.2   1403 4.303 0.582 0.54
NOD/ShiLtJ f 256.0 175.8   47 25.645 0.6867 20.0, 889.0 1.1
NOD/ShiLtJ m 359.9 202.0   44 30.452 0.5613 202.0, 958.0 1.3
NZO/HlLtJ f 152.5 94.05   47 13.718 0.6168 25.0, 589.0 -0.24
NZO/HlLtJ m 120.2 51.5   46 7.5934 0.4285 52.0, 348.0 -0.9
PWK/PhJ f 165.5 125.6   47 18.319 0.759 53.0, 647.0 -0.07
PWK/PhJ m 213.4 166.4   48 24.021 0.7799 -0.05
WSB/EiJ f 161.3 163.1   55 21.994 1.0115 64.0, 820.0 -0.12
WSB/EiJ m 231.4 213.8   51 29.937 0.9238 0.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 17.4285714286 23.045779235 62.6123824368 -27.7552395797
129S1/SvImJ m 29.1224489796 23.045779235 74.3062599878 -16.0613620286
A/J f 97.35 20.8263811414 138.182434429 56.5175655709
A/J m 122.3770491803 20.6549676821 162.8734084751 81.8806898855
C57BL/6J f 246.0833333333 20.8263811414 286.9157677624 205.2508989043
C57BL/6J m 331.813559322 21.0021343092 372.9905773659 290.6365412782
CAST/EiJ f 201.7272727273 28.0822866023 256.7857160795 146.6688293751
CAST/EiJ m 281.3 29.4529506653 339.0457825542 223.5542174457
J:DO f 240.7981283422 4.1708410621 248.975525703 232.6207309814
J:DO m 276.9558089808 4.3068584836 285.3998836106 268.511734351
NOD/ShiLtJ f 256.0425531915 23.5310067452 302.1777066514 209.9073997316
NOD/ShiLtJ m 359.8636363636 24.3199735939 407.5456469995 312.1816257278
NZO/HlLtJ f 152.4680851064 23.5310067452 198.6032385663 106.3329316465
NZO/HlLtJ m 120.1956521739 23.7854034006 166.829578545 73.5617258028
PWK/PhJ f 165.4680851064 23.5310067452 211.6032385663 119.3329316465
PWK/PhJ m 213.3958333333 23.2846019788 259.0478828684 167.7437837983
WSB/EiJ f 161.2545454545 21.7524456668 203.9026322888 118.6064586203
WSB/EiJ m 231.431372549 22.5893819786 275.7203660217 187.1423790763


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 23.2755102041 16.2958267748 55.2252893678 -8.6742689597
A/J both 109.8635245901 14.665996739 138.6178408641 81.1092083162
C57BL/6J both 288.9484463277 14.788744005 317.9434222562 259.9534703991
CAST/EiJ both 241.5136363636 20.3475497524 281.4072686474 201.6200040799
J:DO both 258.8769686615 2.9977051707 264.75430275 252.999634573
NOD/ShiLtJ both 307.9530947776 16.9201757826 341.126979548 274.7792100071
NZO/HlLtJ both 136.3318686401 16.7291190247 169.1311654068 103.5325718735
PWK/PhJ both 189.4319592199 16.5520464577 221.8840855428 156.9798328969
WSB/EiJ both 196.3429590018 15.6799957801 227.0853330702 165.6005849334




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA