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Project measure / variable:   CSNA03   pct_jump_counts_light_LD_do

ID, description, units MPD:90249   pct_jump_counts_light_LD_do   percentage of jump counts in light, 20 min test (LD box), DO   [%]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure light-dark box
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means36.888   % 35.636   %
Median of the strain means39.546   % 39.468   %
SD of the strain means± 8.2637 ± 10.444
Coefficient of variation (CV)0.224 0.2931
Min–max range of strain means21.353   –   47.255   % 16.478   –   49.945   %
Mean sample size per strain209.1   mice 197.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 96.569 96.569 0.6079 0.4356
strain 8 83312.6485 10414.0811 65.552 < 0.0001
sex:strain 8 6258.8495 782.3562 4.9246 < 0.0001
Residuals 3645 579071.7464 158.8674


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 29.941 32.684   43 4.9842 1.0916 -0.84
129S1/SvImJ m 30.073 29.684   43 4.5267 0.9871 -0.53
A/J f 29.631 34.842   58 4.575 1.1759 -0.88
A/J m 16.478 23.326   59 3.0368 1.4155 -1.83
C57BL/6J f 42.037 13.918   60 1.7968 0.3311 23.973, 100.0 0.62
C57BL/6J m 40.956 8.239   59 1.0726 0.2012 23.113, 73.6 0.51
CAST/EiJ f 43.806 6.0566   33 1.0543 0.1383 26.287, 57.86 0.84
CAST/EiJ m 41.974 8.067   30 1.4728 0.1922 6.25, 51.54 0.61
J:DO f 40.686 10.595   1492 0.27429 0.2604 0.46
J:DO m 41.688 11.043   1402 0.29494 0.2649 0.58
NOD/ShiLtJ f 47.255 11.042   47 1.6107 0.2337 2.3913, 69.46 1.25
NOD/ShiLtJ m 49.945 7.1774   44 1.082 0.1437 38.431, 72.92 1.37
NZO/HlLtJ f 21.353 14.743   47 2.1505 0.6905 7.4766, 100.0 -1.88
NZO/HlLtJ m 23.43 8.9326   46 1.317 0.3813 0.84746, 42.125 -1.17
PWK/PhJ f 39.546 12.65   47 1.8452 0.3199 20.69, 100.0 0.32
PWK/PhJ m 36.708 7.641   48 1.1029 0.2082 0.1
WSB/EiJ f 37.735 6.6428   55 0.89572 0.176 25.741, 54.47 0.1
WSB/EiJ m 39.468 10.964   50 1.5506 0.2778 19.305, 100.0 0.37


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 29.9408 1.9221319325 33.7093607485 26.1722392515
129S1/SvImJ m 30.0725581395 1.9221319325 33.8411188881 26.303997391
A/J f 29.6305203448 1.6550206798 32.8753787578 26.3856619319
A/J m 16.4783005085 1.6409351412 19.6955426029 13.261058414
C57BL/6J f 42.03675 1.627203225 45.2270690931 38.8464309069
C57BL/6J m 40.9555423729 1.6409351412 44.1727844673 37.7383002784
CAST/EiJ f 43.8063333333 2.194120381 48.108158721 39.5045079457
CAST/EiJ m 41.9741 2.3012128695 46.4858925298 37.4623074702
J:DO f 40.6861758177 0.3263119736 41.3259479762 40.0464036591
J:DO m 41.6882846648 0.3366227121 42.3482722122 41.0282971173
NOD/ShiLtJ f 47.2550489362 1.8385205669 50.8596799851 43.6504178872
NOD/ShiLtJ m 49.9450227273 1.9001639889 53.6705127956 46.2195326589
NZO/HlLtJ f 21.3526234043 1.8385205669 24.9572544532 17.7479923553
NZO/HlLtJ m 23.4295078261 1.8583970426 27.0731089919 19.7859066602
PWK/PhJ f 39.545893617 1.8385205669 43.150524666 35.941262568
PWK/PhJ m 36.7084166667 1.8192685122 40.2753018478 33.1415314856
WSB/EiJ f 37.7350363636 1.699558339 41.0672159805 34.4028567467
WSB/EiJ m 39.46778 1.782511824 42.9625994659 35.9729605341


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 30.0066790698 1.3591525238 32.6714539304 27.3419042092
A/J both 23.0544104266 1.1653069969 25.3391288346 20.7696920187
C57BL/6J both 41.4961461864 1.1554716 43.7615811673 39.2307112056
CAST/EiJ both 42.8902166667 1.5897912534 46.0071852861 39.7732480473
J:DO both 41.1872302412 0.2344111529 41.6468202698 40.7276402126
NOD/ShiLtJ both 48.6000358317 1.3220042606 51.1919772493 46.0080944142
NZO/HlLtJ both 22.3910656152 1.3070766469 24.953739729 19.8283915013
PWK/PhJ both 38.1271551418 1.2932416435 40.6627041403 35.5916061434
WSB/EiJ both 38.6014081818 1.2314470097 41.0158016925 36.1870146711




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA