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Project measure / variable:   CSNA03   amb_counts_tot_LD_do

ID, description, units MPD:90216   amb_counts_tot_LD_do   total ambulatory counts, 20 min test (LD box), DO   [n]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
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Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means2334.0   n 2027.0   n
Median of the strain means2490.0   n 2058.0   n
SD of the strain means± 1270.0 ± 1114.0
Coefficient of variation (CV)0.5441 0.5498
Min–max range of strain means487.6   –   3713.0   n 541.7   –   3245.0   n
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 150711048.1522 150711048.1522 97.8664 < 0.0001
strain 8 1103734839.7763 137966854.972 89.5908 < 0.0001
sex:strain 8 22803182.6588 2850397.8323 1.8509 0.0634
Residuals 3667 5647059279.6282 1539967.0793


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 487.6 891.6   49 127.4 1.8285 -1.45
129S1/SvImJ m 551.6 756.5   49 108.1 1.3715 3.0, 4301.0 -1.32
A/J f 712.0 965.9   60 124.7 1.3566 27.0, 5491.0 -1.28
A/J m 541.7 554.1   61 70.95 1.0229 41.0, 2583.0 -1.33
C57BL/6J f 1995.0 496.4   60 64.08 0.2488 613.0, 3546.0 -0.27
C57BL/6J m 2049.0 919.5   59 119.7 0.4487 1141.0, 8119.0 0.02
CAST/EiJ f 3713.0 2117.0   33 368.5 0.5702 1062.0, 14498.0 1.09
CAST/EiJ m 3245.0 1907.0   30 348.1 0.5876 123.0, 11105.0 1.09
J:DO f 2490.0 1339.0   1496 34.607 0.5376 6.0, 26552.0 0.12
J:DO m 2058.0 1084.0   1403 28.939 0.5267 16.0, 23356.0 0.03
NOD/ShiLtJ f 3656.0 2067.0   47 301.5 0.5654 1336.0, 13228.0 1.04
NOD/ShiLtJ m 3220.0 713.8   44 107.6 0.2217 2313.0, 5975.0 1.07
NZO/HlLtJ f 1292.0 564.5   47 82.34 0.4368 520.0, 2832.0 -0.82
NZO/HlLtJ m 982.1 304.9   46 44.951 0.3104 469.0, 1896.0 -0.94
PWK/PhJ f 3307.0 2605.0   47 379.9 0.7875 1468.0, 12988.0 0.77
PWK/PhJ m 2369.0 969.3   48 139.9 0.4091 20.0, 5907.0 0.31
WSB/EiJ f 3356.0 1151.0   55 155.2 0.3429 1918.0, 8910.0 0.8
WSB/EiJ m 3225.0 2023.0   51 283.3 0.6273 1723.0, 14223.0 1.08


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 487.632653061 177.2791571974 835.2081397837 140.0571663384
129S1/SvImJ m 551.5714285714 177.2791571974 899.1469152941 203.9959418486
A/J f 711.9833333332 160.2064854729 1026.0859500462 397.8807166202
A/J m 541.7213114753 158.8878911528 853.2386775032 230.2039454474
C57BL/6J f 1995.0166666665 160.2064854729 2309.1192833795 1680.9140499536
C57BL/6J m 2049.2711864406 161.5584629059 2366.024505141 1732.5178677402
CAST/EiJ f 3713.2424242424 216.0223809431 4136.7783062169 3289.7065422679
CAST/EiJ m 3245.0999999999 226.5661845359 3689.3081805323 2800.8918194676
J:DO f 2489.5929144385 32.0841044578 2552.4973663734 2426.6884625036
J:DO m 2057.9586600142 33.1304155245 2122.9145210602 1993.0027989683
NOD/ShiLtJ f 3655.8723404255 181.0117593015 4010.7660083353 3300.9786725157
NOD/ShiLtJ m 3219.8409090909 187.0808696827 3586.633742295 2853.0480758867
NZO/HlLtJ f 1292.2553191489 181.0117593015 1647.1489870587 937.3616512391
NZO/HlLtJ m 982.1086956522 182.9687000588 1340.8391633694 623.378227935
PWK/PhJ f 3307.4042553191 181.0117593015 3662.2979232289 2952.5105874093
PWK/PhJ m 2369.3125 179.1162959769 2720.4899014404 2018.1350985596
WSB/EiJ f 3355.8545454545 167.3302167602 3683.9240289362 3027.7850619729
WSB/EiJ m 3225.0392156863 173.7683311958 3565.7313379142 2884.3470934584


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 519.6020408162 125.3552942173 765.375024452 273.8290571804
A/J both 626.8523224042 112.8178619973 848.044277029 405.6603677794
C57BL/6J both 2022.1439265535 113.7620926804 2245.1871503543 1799.1007027528
CAST/EiJ both 3479.1712121212 156.5230853928 3786.0521136823 3172.2903105601
J:DO both 2273.7757872264 23.0597820441 2318.9870522978 2228.5645221549
NOD/ShiLtJ both 3437.8566247582 130.1580854256 3693.046014238 3182.6672352783
NZO/HlLtJ both 1137.1820074005 128.6883854575 1389.4898867816 884.8741280195
PWK/PhJ both 2838.3583776596 127.3262585741 3087.9956559279 2588.7210993912
WSB/EiJ both 3290.4468805704 120.6180276405 3526.9319266833 3053.9618344575




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA