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Project measure / variable:   CSNA03   time_light_LD_do

ID, description, units MPD:90207   time_light_LD_do   time in light, 20 min test (LD box), DO   [s]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
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Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means451.5   s 431.1   s
Median of the strain means476.6   s 488.1   s
SD of the strain means± 109.2 ± 128.4
Coefficient of variation (CV)0.2419 0.298
Min–max range of strain means215.5   –   581.1   s 229.6   –   597.7   s
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 694.3378 694.3378 0.0247 0.875
strain 8 13780232.0816 1722529.0102 61.399 < 0.0001
sex:strain 8 716024.9595 89503.1199 3.1903 0.0013
Residuals 3667 102876507.8565 28054.679


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 406.3 496.2   49 70.89 1.2212 1.08, 1200.0 -0.41
129S1/SvImJ m 348.9 472.4   49 67.49 1.3541 0.52, 1914.0 -0.64
A/J f 374.4 437.4   60 56.47 1.1683 0.5, 1200.0 -0.71
A/J m 250.2 357.0   61 45.714 1.4272 1.4, 1200.0 -1.41
C57BL/6J f 503.8 188.3   60 24.311 0.3738 79.36, 1200.0 0.48
C57BL/6J m 494.3 110.8   59 14.42 0.2241 275.2, 799.8 0.49
CAST/EiJ f 546.6 108.7   33 18.917 0.1988 189.0, 922.0 0.87
CAST/EiJ m 533.0 141.9   30 25.912 0.2663 2.12, 905.9 0.79
J:DO f 501.9 132.7   1496 3.4313 0.2644 0.04, 1071.0 0.46
J:DO m 511.7 136.1   1403 3.6342 0.266 0.16, 1200.0 0.63
NOD/ShiLtJ f 581.1 134.9   47 19.673 0.2321 27.16, 844.2 1.19
NOD/ShiLtJ m 597.7 91.5   44 13.795 0.1531 440.6, 942.3 1.3
NZO/HlLtJ f 215.5 116.3   47 16.964 0.5396 16.52, 577.7 -2.16
NZO/HlLtJ m 229.6 105.4   46 15.54 0.459 14.8, 469.6 -1.57
PWK/PhJ f 476.6 134.6   47 19.629 0.2823 285.9, 944.6 0.23
PWK/PhJ m 426.2 96.41   48 13.916 0.2262 2.76, 659.4 -0.04
WSB/EiJ f 457.3 111.7   55 15.058 0.2442 276.6, 873.5 0.05
WSB/EiJ m 488.1 146.1   51 20.463 0.2994 199.7, 1008.0 0.44


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 406.3336734693 23.9279014789 453.2469831571 359.4203637816
129S1/SvImJ m 348.8920408163 23.9279014789 395.805350504 301.9787311285
A/J f 374.413 21.6235515854 416.8083756651 332.0176243349
A/J m 250.1704918033 21.4455769409 292.2169284015 208.1240552051
C57BL/6J f 503.836 21.6235515854 546.2313756651 461.4406243349
C57BL/6J m 494.2847457627 21.8060320492 537.0378946539 451.5315968714
CAST/EiJ f 546.6242424242 29.1571910097 603.7901553092 489.4583295393
CAST/EiJ m 533.0306666667 30.5803199188 592.9867819141 473.0745514192
J:DO f 501.8979010695 4.3304881558 510.3883042973 493.4074978418
J:DO m 511.7088096935 4.4717119099 520.476097784 502.941521603
NOD/ShiLtJ f 581.0587234043 24.4317020205 628.9597900354 533.1576567731
NOD/ShiLtJ m 597.6863636364 25.2508681174 647.1934964253 548.1792308475
NZO/HlLtJ f 215.5461702127 24.4317020205 263.4472368439 167.6451035815
NZO/HlLtJ m 229.6186956522 24.6958362051 278.0376267026 181.1997646017
PWK/PhJ f 476.6191489362 24.4317020205 524.5202155673 428.718082305
PWK/PhJ m 426.1970833333 24.17586563 473.5965542927 378.7976123739
WSB/EiJ f 457.2909090909 22.5850630406 501.5714348057 413.0103833761
WSB/EiJ m 488.0764705882 23.4540347255 534.0607118503 442.0922293261


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 377.6128571428 16.9195813953 410.7855765509 344.4401377347
A/J both 312.2917459016 15.2273664294 342.1466898322 282.4368019711
C57BL/6J both 499.0603728813 15.3548120869 529.1651881851 468.9555575775
CAST/EiJ both 539.8274545454 21.1263919891 581.2480935782 498.4068155126
J:DO both 506.8033553815 3.1124481953 512.9056559197 500.7010548434
NOD/ShiLtJ both 589.3725435203 17.5678285817 623.8162235697 554.9288634709
NZO/HlLtJ both 222.5824329324 17.369458753 256.6371868901 188.5276789748
PWK/PhJ both 451.4081161347 17.1856083874 485.1024110214 417.7138212481
WSB/EiJ both 472.6836898396 16.2801782657 504.6027883624 440.7645913168




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA