Project measure / variable:   CSNA03   vert_time_dark_LD_do

ID, description, units MPD:90198   vert_time_dark_LD_do   vertical time in dark, 20 min test (LD box), DO   [s]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure light-dark box
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means37.91   s 53.02   s
Median of the strain means35.106   s 46.987   s
SD of the strain means± 26.478 ± 17.477
Coefficient of variation (CV)0.6985 0.3296
Min–max range of strain means7.8049   –   100.1   s 33.351   –   79.27   s
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 332097.2929 332097.2929 47.9723 < 0.0001
strain 8 368013.2442 46001.6555 6.6451 < 0.0001
sex:strain 8 65680.0016 8210.0002 1.186 0.3032
Residuals 3667 25385501.2149 6922.6892


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 7.8049 43.366   49 6.1951 5.5562 -1.14
129S1/SvImJ m 46.987 186.9   49 26.703 3.9781 -0.35
A/J f 36.013 115.0   60 14.84 3.1919 -0.07
A/J m 35.51 67.32   61 8.6197 1.8959 -1.0
C57BL/6J f 49.588 83.31   60 10.755 1.68 0.44
C57BL/6J m 75.75 103.5   59 13.48 1.3669 11.72, 401.3 1.3
CAST/EiJ f 22.12 37.509   33 6.5294 1.6957 2.0, 174.6 -0.6
CAST/EiJ m 44.597 69.03   30 12.603 1.5478 0.08, 250.3 -0.48
J:DO f 42.958 70.68   1496 1.8274 1.6454 0.19
J:DO m 63.35 92.82   1403 2.4781 1.4652 0.59
NOD/ShiLtJ f 35.106 57.42   47 8.3761 1.6357 0.32, 268.9 -0.11
NOD/ShiLtJ m 61.43 85.75   44 12.927 1.3959 10.52, 310.8 0.48
NZO/HlLtJ f 100.1 125.6   47 18.319 1.2542 17.08, 574.6 2.35
NZO/HlLtJ m 79.27 56.87   46 8.3851 0.7174 34.92, 425.9 1.5
PWK/PhJ f 26.108 40.615   47 5.9243 1.5557 3.52, 191.4 -0.45
PWK/PhJ m 36.912 48.954   48 7.066 1.3262 -0.92
WSB/EiJ f 21.388 43.413   55 5.8539 2.0298 1.68, 193.7 -0.62
WSB/EiJ m 33.351 59.03   51 8.2656 1.7699 -1.13


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 7.8048979592 11.886099906 31.1089175934 -15.499121675
129S1/SvImJ m 46.9869387755 11.886099906 70.2909584097 23.6829191413
A/J f 36.0133333333 10.741422297 57.07308532 14.9535813467
A/J m 35.5098360656 10.6530140257 56.3962538126 14.6234183186
C57BL/6J f 49.5878333333 10.741422297 70.64758532 28.5280813467
C57BL/6J m 75.7501694915 10.832068818 96.9876440551 54.512694928
CAST/EiJ f 22.12 14.4837308706 50.5169637859 -6.2769637859
CAST/EiJ m 44.5966666667 15.1906650916 74.3796535464 14.8136797869
J:DO f 42.9577673797 2.1511545802 47.1753449678 38.7401897916
J:DO m 63.3516892373 2.2213069775 67.7068083956 58.9965700791
NOD/ShiLtJ f 35.1061702128 12.1363610321 58.9008545934 11.3114858321
NOD/ShiLtJ m 61.4315909091 12.5432788755 86.024082938 36.8390988802
NZO/HlLtJ f 100.1378723404 12.1363610321 123.9325567211 76.3431879598
NZO/HlLtJ m 79.2708695652 12.2675687483 103.3228012532 55.2189378773
PWK/PhJ f 26.1076595745 12.1363610321 49.9023439551 2.3129751938
PWK/PhJ m 36.911875 12.0092752156 60.4573935157 13.3663564843
WSB/EiJ f 21.3883636364 11.2190496906 43.3845572015 -0.6078299287
WSB/EiJ m 33.3509803922 11.6507082826 56.1934885922 10.5084721921


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 27.3959183674 8.4047418454 43.8743486796 10.9174880551
A/J both 35.7615846995 7.5641400832 50.5919218504 20.9312475485
C57BL/6J both 62.6690014124 7.6274482601 77.6234612788 47.7145415461
CAST/EiJ both 33.3583333333 10.4944600368 53.9338883668 12.7827782999
J:DO both 53.1547283085 1.5460975645 56.1860243842 50.1234322328
NOD/ShiLtJ both 48.2688805609 8.7267563283 65.3786560487 31.1591050732
NZO/HlLtJ both 89.7043709528 8.6282168218 106.6209487886 72.787793117
PWK/PhJ both 31.5097672872 8.536889807 48.2472883623 14.7722462122
WSB/EiJ both 27.3696720143 8.0871206162 43.2253706131 11.5139734155




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA