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Project measure / variable:   CSNA03   vert_time_light_LD_do

ID, description, units MPD:90195   vert_time_light_LD_do   vertical time in light, 20 min test (LD box), DO   [s]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
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Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means26.799   s 41.039   s
Median of the strain means25.788   s 34.76   s
SD of the strain means± 13.591 ± 23.792
Coefficient of variation (CV)0.5072 0.5797
Min–max range of strain means2.8233   –   45.246   s 9.5076   –   74.05   s
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 323182.9329 323182.9329 85.4558 < 0.0001
strain 8 574453.4686 71806.6836 18.9871 < 0.0001
sex:strain 8 46412.147 5801.5184 1.534 0.1399
Residuals 3667 13868122.5315 3781.8714


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.8233 12.537   49 1.791 4.4406 -1.76
129S1/SvImJ m 9.5076 37.224   49 5.3177 3.9152 -1.33
A/J f 25.788 119.3   60 15.397 4.6249 -0.07
A/J m 20.088 52.5   61 6.7221 2.6135 -0.88
C57BL/6J f 39.907 55.38   60 7.1492 1.3877 2.48, 268.8 0.96
C57BL/6J m 74.05 73.59   59 9.5806 0.9938 11.56, 336.5 1.39
CAST/EiJ f 19.092 22.018   33 3.8328 1.1532 0.8, 86.28 -0.57
CAST/EiJ m 38.241 43.031   30 7.8564 1.1253 0.08, 140.3 -0.12
J:DO f 45.246 56.0   1496 1.4477 1.2376 1.36
J:DO m 65.76 70.4   1403 1.8794 1.0706 1.04
NOD/ShiLtJ f 39.625 48.95   47 7.14 1.2353 0.08, 251.8 0.94
NOD/ShiLtJ m 72.22 70.68   44 10.656 0.9788 21.48, 295.2 1.31
NZO/HlLtJ f 30.852 27.127   47 3.9568 0.8792 1.52, 119.0 0.3
NZO/HlLtJ m 34.76 26.279   46 3.8746 0.756 0.04, 156.5 -0.26
PWK/PhJ f 22.507 28.244   47 4.1198 1.2549 4.72, 128.4 -0.32
PWK/PhJ m 26.654 26.982   48 3.8946 1.0123 -0.6
WSB/EiJ f 15.351 24.989   55 3.3695 1.6278 1.8, 109.8 -0.84
WSB/EiJ m 28.073 43.661   51 6.1137 1.5552 -0.54


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.8232653061 8.7852745876 20.0477723437 -14.4012417315
129S1/SvImJ m 9.5075510204 8.7852745876 26.732058058 -7.7169560172
A/J f 25.7876666667 7.9392185062 41.3533867441 10.2219465892
A/J m 20.0883606557 7.8738740328 35.5259656321 4.6507556794
C57BL/6J f 39.9073333333 7.9392185062 55.4730534108 24.3416132559
C57BL/6J m 74.050338983 8.0062173186 89.7474176769 58.3532602892
CAST/EiJ f 19.0921212121 10.7052400499 40.0809338828 -1.8966914586
CAST/EiJ m 38.2406666667 11.2277504861 60.2539191083 16.2274142251
J:DO f 45.2456350267 1.5899650699 48.3629382211 42.1283318324
J:DO m 65.7552601568 1.6418162303 68.9742233129 62.5362970007
NOD/ShiLtJ f 39.6253191489 8.9702480212 57.2124871571 22.0381511408
NOD/ShiLtJ m 72.2181818182 9.2710098368 90.3950267863 54.0413368501
NZO/HlLtJ f 30.8521276596 8.9702480212 48.4392956677 13.2649596514
NZO/HlLtJ m 34.76 9.0672264938 52.53730508 16.98269492
PWK/PhJ f 22.5065957447 8.9702480212 40.0937637529 4.9194277365
PWK/PhJ m 26.65375 8.8763161341 44.0567541059 9.2507458941
WSB/EiJ f 15.3512727273 8.2922432861 31.6091371133 -0.9065916588
WSB/EiJ m 28.0733333333 8.6112915264 44.9567272467 11.18993942


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 6.1654081633 6.2121272355 18.3449738922 -6.0141575656
A/J both 22.9380136612 5.5908202165 33.8994379406 11.9765893818
C57BL/6J both 56.9788361582 5.637612665 68.0320022323 45.9256700841
CAST/EiJ both 28.6663939394 7.7566833361 43.8742335327 13.4585543461
J:DO both 55.5004475918 1.1427542887 57.7409443562 53.2599508273
NOD/ShiLtJ both 55.9217504836 6.4501351334 68.5679571435 43.2755438236
NZO/HlLtJ both 32.8060638298 6.3773024441 45.3094739092 20.3026537504
PWK/PhJ both 24.5801728723 6.3098006639 36.9512382111 12.2091075336
WSB/EiJ both 21.7123030303 5.9773664868 33.4315942251 9.9930118356




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA