Project measure / variable:   CSNA03   amb_time_light_LD_do

ID, description, units MPD:90147   amb_time_light_LD_do   ambulatory time in light, 20 min test (LD box), DO   [s]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
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Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means41.974   s 37.574   s
Median of the strain means46.193   s 38.896   s
SD of the strain means± 27.059 ± 24.365
Coefficient of variation (CV)0.6447 0.6484
Min–max range of strain means6.8765   –   78.0   s 6.4248   –   72.39   s
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 18133.3867 18133.3867 31.3948 < 0.0001
strain 8 521495.1907 65186.8988 112.8599 < 0.0001
sex:strain 8 6860.0452 857.5057 1.4846 0.1572
Residuals 3667 2118027.6422 577.5914


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 6.8765 13.574   49 1.9392 1.974 -1.3
129S1/SvImJ m 8.9273 14.046   49 2.0066 1.5734 -1.18
A/J f 10.035 20.107   60 2.5958 2.0036 -1.18
A/J m 6.4248 10.252   61 1.3126 1.5957 -1.28
C57BL/6J f 36.378 13.528   60 1.7465 0.3719 7.24, 97.36 -0.21
C57BL/6J m 35.457 15.661   59 2.0389 0.4417 18.48, 132.0 -0.09
CAST/EiJ f 72.09 40.94   33 7.1268 0.5679 17.56, 275.0 1.11
CAST/EiJ m 63.65 37.907   30 6.9208 0.5956 0.08, 230.6 1.07
J:DO f 46.193 25.308   1496 0.65431 0.5479 0.16
J:DO m 41.903 22.398   1403 0.59796 0.5345 0.18
NOD/ShiLtJ f 78.0 43.775   47 6.3853 0.5612 0.88, 262.6 1.33
NOD/ShiLtJ m 72.39 19.518   44 2.9425 0.2696 44.64, 133.4 1.43
NZO/HlLtJ f 12.747 10.321   47 1.5055 0.8097 0.6, 63.08 -1.08
NZO/HlLtJ m 12.562 7.0603   46 1.041 0.562 0.08, 31.52 -1.03
PWK/PhJ f 56.89 41.417   47 6.0413 0.728 21.68, 211.6 0.55
PWK/PhJ m 38.896 12.753   48 1.8408 0.3279 0.08, 83.35 0.05
WSB/EiJ f 58.56 24.015   55 3.2382 0.4101 28.48, 196.0 0.61
WSB/EiJ m 57.96 34.356   51 4.8108 0.5928 27.35, 269.0 0.84


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 6.8765306122 3.4333044537 13.6079054982 0.1451557263
129S1/SvImJ m 8.9273469388 3.4333044537 15.6587218247 2.1959720528
A/J f 10.0353333333 3.1026638934 16.1184506604 3.9522160063
A/J m 6.4247540984 3.0771271308 12.4578037647 0.391704432
C57BL/6J f 36.3776666667 3.1026638934 42.4607839937 30.2945493396
C57BL/6J m 35.4572881356 3.1288471752 41.5917406962 29.322835575
CAST/EiJ f 72.0915151515 4.1836311404 80.293988882 63.889041421
CAST/EiJ m 63.6453333333 4.3878293575 72.2481603588 55.0425063079
J:DO f 46.1931818182 0.6213618142 47.4114306998 44.9749329366
J:DO m 41.9031646472 0.6416253607 43.1611424633 40.645186831
NOD/ShiLtJ f 78.0006382979 3.5055924746 84.8737418814 71.1275347143
NOD/ShiLtJ m 72.3868181818 3.6231308476 79.4903688063 65.2832675573
NZO/HlLtJ f 12.7470212766 3.5055924746 19.6201248601 5.8739176931
NZO/HlLtJ m 12.562173913 3.5434918731 19.5095834786 5.6147643475
PWK/PhJ f 56.8927659574 3.5055924746 63.765869541 50.0196623739
PWK/PhJ m 38.895625 3.4688836885 45.6967569292 32.0944930708
WSB/EiJ f 58.556 3.2406267467 64.9096088312 52.2023911688
WSB/EiJ m 57.9594117647 3.3653114942 64.5574788983 51.3613446311


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 7.9019387755 2.4277128611 12.6617396041 3.142137947
A/J both 8.2300437158 2.1849047241 12.5137922114 3.9462952203
C57BL/6J both 35.9174774011 2.203191315 40.23707879 31.5978760123
CAST/EiJ both 67.8684242424 3.0313287511 73.8116810964 61.9251673884
J:DO both 44.0481732327 0.4465908663 44.9237642507 43.1725822146
NOD/ShiLtJ both 75.1937282398 2.5207268663 80.1358933612 70.2515631185
NZO/HlLtJ both 12.6545975948 2.4922636926 17.5409575013 7.7682376884
PWK/PhJ both 47.8941954787 2.4658838498 52.7288347721 43.0595561853
WSB/EiJ both 58.2577058824 2.3359678489 62.8376304199 53.6777813448




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA