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Project measure / variable:   CSNA03   dist_dark_LD_do

ID, description, units MPD:90138   dist_dark_LD_do   distance traveled in dark, 20 min test (LD box), DO   [cm]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure light-dark box
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means3507.0   cm 3211.0   cm
Median of the strain means3705.0   cm 3442.0   cm
SD of the strain means± 1373.0 ± 1141.0
Coefficient of variation (CV)0.3916 0.3554
Min–max range of strain means1081.0   –   4965.0   cm 1284.0   –   4507.0   cm
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 168379837.7457 168379837.7457 68.5605 < 0.0001
strain 8 1281036095.3436 160129511.918 65.2012 < 0.0001
sex:strain 8 31585450.8392 3948181.3549 1.6076 0.1172
Residuals 3667 9005895902.1142 2455930.1615


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1081.0 1509.0   49 215.5 1.3956 -1.77
129S1/SvImJ m 1284.0 1303.0   49 186.1 1.0147 -1.69
A/J f 1633.0 1421.0   60 183.5 0.8705 -1.36
A/J m 1602.0 986.4   61 126.3 0.6156 -1.41
C57BL/6J f 3221.0 938.5   60 121.2 0.2914 -0.21
C57BL/6J m 3442.0 1082.0   59 140.9 0.3144 2020.0, 9878.0 0.2
CAST/EiJ f 4642.0 966.8   33 168.3 0.2083 2706.0, 8037.0 0.83
CAST/EiJ m 4227.0 1430.0   30 261.1 0.3384 595.6, 8935.0 0.89
J:DO f 3705.0 1990.0   1496 51.45 0.5371 33.784, 67053.0 0.14
J:DO m 3239.0 1095.0   1403 29.232 0.3381 0.02
NOD/ShiLtJ f 4405.0 1797.0   47 262.1 0.4079 1869.0, 13762.0 0.65
NOD/ShiLtJ m 4033.0 1026.0   44 154.7 0.2544 1525.0, 8272.0 0.72
NZO/HlLtJ f 3268.0 1068.0   47 155.7 0.3267 1682.0, 6348.0 -0.17
NZO/HlLtJ m 2706.0 543.8   46 80.18 0.201 1814.0, 4580.0 -0.44
PWK/PhJ f 4642.0 2492.0   47 363.6 0.5369 2776.0, 17258.0 0.83
PWK/PhJ m 3860.0 1431.0   48 206.5 0.3706 109.6, 10126.0 0.57
WSB/EiJ f 4965.0 1058.0   55 142.7 0.2131 2702.0, 7424.0 1.06
WSB/EiJ m 4507.0 1587.0   51 222.2 0.3521 2692.0, 11843.0 1.14


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1081.1620612246 223.8772514202 1520.0982895927 642.2258328564
129S1/SvImJ m 1284.192246939 223.8772514203 1723.1284753072 845.2560185707
A/J f 1632.8529333331 202.3170021473 2029.5178972539 1236.1879694124
A/J m 1602.2870491801 200.6518133186 1995.6872253686 1208.8868729917
C57BL/6J f 3220.8166666666 202.3170021472 3617.4816305873 2824.1517027459
C57BL/6J m 3442.4576271186 204.0243488905 3842.4700340476 3042.4452201896
CAST/EiJ f 4642.0303030303 272.8041900433 5176.893231269 4107.1673747917
CAST/EiJ m 4226.52 286.1194483353 4787.4889716948 3665.5510283052
J:DO f 3705.2126163101 40.5174597728 3784.6515984439 3625.7736341764
J:DO m 3238.6564575909 41.8387952836 3320.6860648188 3156.626850363
NOD/ShiLtJ f 4405.1063829787 228.5909736249 4853.284387512 3956.9283784453
NOD/ShiLtJ m 4032.9772727272 236.2553588363 4496.1821561244 3569.77238933
NZO/HlLtJ f 3267.6170212767 228.5909736249 3715.79502581 2819.4390167433
NZO/HlLtJ m 2705.4999999999 231.0622992159 3158.523312965 2252.4766870349
PWK/PhJ f 4642.4042553192 228.5909736249 5090.5822598525 4194.2262507858
PWK/PhJ m 3860.4083333334 226.1972849026 4303.8932451429 3416.9234215238
WSB/EiJ f 4964.5272727273 211.3132169627 5378.8303154416 4550.2242300129
WSB/EiJ m 4506.568627451 219.4435995015 4936.8121885706 4076.3250663313


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1182.6771540818 158.3051226327 1493.0519376694 872.3023704942
A/J both 1617.5699912566 142.4722074177 1896.9025852317 1338.2373972816
C57BL/6J both 3331.6371468926 143.664630562 3613.3076189425 3049.9666748427
CAST/EiJ both 4434.2751515152 197.6654147928 4821.820161549 4046.7301414814
J:DO both 3471.9345369505 29.1210805827 3529.0296513308 3414.8394225702
NOD/ShiLtJ both 4219.0418278529 164.370334764 4541.3081337827 3896.7755219232
NZO/HlLtJ both 2986.5585106383 162.5143219394 3305.1858971878 2667.9311240889
PWK/PhJ both 4251.4062943263 160.7941579474 4566.6611082269 3936.1514804256
WSB/EiJ both 4735.5479500891 152.3226583812 5034.1934477478 4436.9024524304




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA