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Project measure / variable:   CSNA03   rears_OFT_do_bin4

ID, description, units MPD:90072   rears_OFT_do_bin4   number of rears in successive 5 min intervals, 60 min test (OFT), DO   [n]  15-20 min  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means40.69   n 54.06   n
Median of the strain means38.188   n 56.13   n
SD of the strain means± 23.083 ± 33.065
Coefficient of variation (CV)0.5673 0.6116
Min–max range of strain means4.0   –   74.15   n 2.5102   –   101.7   n
Mean sample size per strain208.0   mice 196.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 68627.8823 68627.8823 44.4657 < 0.0001
strain 8 826622.9647 103327.8706 66.9487 < 0.0001
sex:strain 8 35638.9003 4454.8625 2.8864 0.0033
Residuals 3625 5594787.9239 1543.3898


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 4.0 19.302   48 2.786 4.8254 -1.59
129S1/SvImJ m 2.5102 5.694   49 0.81343 2.2683 -1.56
A/J f 22.017 29.385   59 3.8256 1.3347 -0.81
A/J m 31.656 47.281   61 6.0537 1.4936 -0.68
C57BL/6J f 74.15 45.057   61 5.769 0.6077 16.0, 241.0 1.45
C57BL/6J m 101.7 41.826   59 5.4453 0.4111 22.0, 224.0 1.44
CAST/EiJ f 42.576 46.171   33 8.0373 1.0844 2.0, 231.0 0.08
CAST/EiJ m 56.13 53.33   30 9.7372 0.9501 12.0, 199.0 0.06
J:DO f 60.59 40.035   1474 1.0428 0.6608 0.86
J:DO m 68.03 39.498   1383 1.0621 0.5806 0.42
NOD/ShiLtJ f 67.87 36.682   47 5.3506 0.5405 10.0, 215.0 1.18
NOD/ShiLtJ m 99.77 51.23   44 7.7229 0.5134 35.0, 251.0 1.38
NZO/HlLtJ f 27.404 15.699   47 2.29 0.5729 5.0, 74.0 -0.58
NZO/HlLtJ m 22.739 13.374   46 1.9719 0.5881 4.0, 67.0 -0.95
PWK/PhJ f 38.188 37.792   48 5.4547 0.9896 14.0, 241.0 -0.11
PWK/PhJ m 56.43 35.278   47 5.1459 0.6252 0.07
WSB/EiJ f 29.418 29.102   55 3.9241 0.9892 3.0, 145.0 -0.49
WSB/EiJ m 47.577 51.7   52 7.1693 1.0866 -0.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 4.0 5.6704456249 15.1175812705 -7.1175812705
129S1/SvImJ m 2.5102040816 5.6122856708 13.5137558632 -8.4933476999
A/J f 22.0169491525 5.1146015172 32.0447321161 11.989166189
A/J m 31.6557377049 5.0300568261 41.517760773 21.7937146369
C57BL/6J f 74.1475409836 5.0300568261 84.0095640517 64.2855179156
C57BL/6J m 101.7457627119 5.1146015172 111.7735456754 91.7179797483
CAST/EiJ f 42.5757575758 6.8388147389 55.984065085 29.1674500665
CAST/EiJ m 56.1333333333 7.1726094092 70.196084888 42.0705817786
J:DO f 60.5861601085 1.0232672325 62.5923968968 58.5799233203
J:DO m 68.0274765004 1.056395929 70.0986660277 65.956286973
NOD/ShiLtJ f 67.8723404255 5.7304520116 79.107571335 56.6371095161
NOD/ShiLtJ m 99.7727272727 5.9225872957 111.3846621975 88.1607923479
NZO/HlLtJ f 27.4042553191 5.7304520116 38.6394862286 16.1690244097
NZO/HlLtJ m 22.7391304348 5.7924046447 34.0958268301 11.3824340395
PWK/PhJ f 38.1875 5.6704456249 49.3050812705 27.0699187295
PWK/PhJ m 56.4255319149 5.7304520116 67.6607628244 45.1903010054
WSB/EiJ f 29.4181818182 5.2973231183 39.804212155 19.0321514813
WSB/EiJ m 47.5769230769 5.447987935 58.2583496586 36.8954964952


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 3.2551020408 3.9891009023 11.0762075432 -4.5660034615
A/J both 26.8363434287 3.5868029063 33.8686959896 19.8039908679
C57BL/6J both 87.9466518477 3.5868029063 94.9790044086 80.9142992869
CAST/EiJ both 49.3545454545 4.955192044 59.0697872368 39.6393036723
J:DO both 64.3068183045 0.7353652473 65.7485891001 62.8650475088
NOD/ShiLtJ both 83.8225338491 4.1205315353 91.9013246975 75.7437430008
NZO/HlLtJ both 25.071692877 4.074003922 33.0592608204 17.0841249335
PWK/PhJ both 47.3065159574 4.0308818465 55.2095379569 39.403493958
WSB/EiJ both 38.4975524476 3.7994145852 45.9467554247 31.0483494704




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA