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Project measure / variable:   CSNA03   rears_OFT_in_bin3

ID, description, units MPD:90067   rears_OFT_in_bin3   number of rears in successive 5 min intervals, 60 min test (OFT), founders   [n]  10-15 min  
Data set, strains CSNA03   inbred w/CC8   10 strains     sex: both     age: 4-14wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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CSNA03 - number of rears in successive 5 min intervals, 60 min test (OFT), founders 10-15 min



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means39.511   n 55.76   n
Median of the strain means41.719   n 55.91   n
SD of the strain means± 19.073 ± 29.908
Coefficient of variation (CV)0.4827 0.5364
Min–max range of strain means5.0833   –   68.82   n 5.1429   –   97.66   n
Mean sample size per strain43.5   mice 42.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 45619.7169 45619.7169 31.789 < 0.0001
strain 9 527391.8662 58599.0962 40.8333 < 0.0001
sex:strain 9 29550.8929 3283.4325 2.288 0.0154
Residuals 841 1206902.5297 1435.0803


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 5.0833 23.623   48 3.4097 4.6471 -1.81
129S1/SvImJ m 5.1429 12.611   49 1.8016 2.4522 -1.69
A/J f 22.068 30.248   59 3.9379 1.3707 -0.91
A/J m 30.115 48.038   61 6.1507 1.5952 -0.86
C57BL/6J f 68.82 47.894   61 6.1322 0.6959 16.0, 223.0 1.54
C57BL/6J m 95.42 43.367   59 5.6459 0.4545 19.0, 223.0 1.33
C57BL/6NJ f 43.0 34.571   13 9.5883 0.804 11.0, 150.0 0.18
C57BL/6NJ m 74.62 19.692   13 5.4614 0.2639 52.0, 117.0 0.63
CAST/EiJ f 43.545 48.203   33 8.391 1.107 2.0, 216.0 0.21
CAST/EiJ m 57.13 53.4   30 9.7494 0.9346 11.0, 213.0 0.05
DBA/2J f 48.417 26.876   24 5.4861 0.5551 12.0, 120.0 0.47
DBA/2J m 66.32 37.816   25 7.5632 0.5702 28.0, 212.0 0.35
NOD/ShiLtJ f 64.19 42.198   47 6.1552 0.6574 7.0, 218.0 1.29
NOD/ShiLtJ m 97.66 48.306   44 7.2824 0.4946 47.0, 229.0 1.4
NZO/HlLtJ f 26.766 14.909   47 2.1747 0.557 6.0, 81.0 -0.67
NZO/HlLtJ m 23.783 13.019   46 1.9196 0.5474 5.0, 69.0 -1.07
PWK/PhJ f 40.438 33.655   48 4.8576 0.8323 6.0, 210.0 0.05
PWK/PhJ m 52.7 30.935   47 4.5123 0.587 -0.1
WSB/EiJ f 32.782 41.499   55 5.5957 1.2659 6.0, 196.0 -0.35
WSB/EiJ m 54.69 47.995   52 6.6556 0.8775 -0.04


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 5.0833333333 5.4678612077 15.8155898192 -5.6489231525
129S1/SvImJ m 5.1428571429 5.4117790974 15.7650362934 -5.4793220076
A/J f 22.0677966102 4.9318753901 31.7480261611 12.3875670592
A/J m 30.1147540984 4.8503511736 39.634968834 20.5945393627
C57BL/6J f 68.8196721311 4.8503511736 78.3398868668 59.2994573955
C57BL/6J m 95.4237288136 4.9318753901 105.1039583645 85.7434992626
C57BL/6NJ f 43.0 10.5067022453 63.6224370069 22.3775629931
C57BL/6NJ m 74.6153846154 10.5067022453 95.2378216223 53.9929476085
CAST/EiJ f 43.5454545455 6.5944887387 56.4890428791 30.6018662118
CAST/EiJ m 57.1333333333 6.9163581383 70.7086833047 43.557983362
DBA/2J f 48.4166666667 7.732723477 63.5943693438 33.2389639895
DBA/2J m 66.32 7.5764907363 81.1910508107 51.4489491893
NOD/ShiLtJ f 64.1914893617 5.5257237842 75.037317862 53.3456608614
NOD/ShiLtJ m 97.6590909091 5.7109947727 108.8685672221 86.4496145961
NZO/HlLtJ f 26.7659574468 5.5257237842 37.6117859471 15.9201289465
NZO/HlLtJ m 23.7826086957 5.5854630748 34.7456928037 12.8195245876
PWK/PhJ f 40.4375 5.4678612077 51.1697564859 29.7052435141
PWK/PhJ m 52.7021276596 5.5257237842 63.5479561599 41.8562991592
WSB/EiJ f 32.7818181818 5.1080690124 42.8078785931 22.7557577706
WSB/EiJ m 54.6923076923 5.2533511227 65.0035261958 44.3810891889


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 5.1130952381 3.8465848224 12.6631286682 -2.436938192
A/J both 26.0912753543 3.4586594719 32.879893269 19.3026574395
C57BL/6J both 82.1217004724 3.4586594719 88.9103183871 75.3330825576
C57BL/6NJ both 58.8076923077 7.4293604056 73.3899573599 44.2254272555
CAST/EiJ both 50.3393939394 4.7781610381 59.7179146889 40.9608731899
DBA/2J both 57.3683333333 5.4129064339 67.9927252073 46.7439414593
NOD/ShiLtJ both 80.9252901354 3.9733199164 88.7240777827 73.1265024881
NZO/HlLtJ both 25.2742830712 3.9284545657 32.9850095127 17.5635566298
PWK/PhJ both 46.5698138298 3.8868730853 54.1989246092 38.9407030504
WSB/EiJ both 43.7370629371 3.6636753081 50.9280836295 36.5460422446




  GWAS USING LINEAR MIXED MODELS