Project measure / variable:   JaxCC1   pip_30

ID, description, units MPD:89051   pip_30   auditory brainstem response (ABR) threshold, sound pressure level   [dB]  30 kHz pip  
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 15-17wks
Procedure ABR test
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  STRAIN COMPARISON PLOT
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JaxCC1 - auditory brainstem response (ABR) threshold, sound pressure level 30 kHz pip



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means63.1   dB 65.93   dB
Median of the strain means59.38   dB 68.33   dB
SD of the strain means± 17.763 ± 18.261
Coefficient of variation (CV)0.2815 0.277
Min–max range of strain means28.333   –   96.25   dB 30.0   –   100.0   dB
Mean sample size per strain3.2   mice 3.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 165.6301 165.6301 1.2659 0.264
strain 16 30716.1587 1919.7599 14.6721 < 0.0001
sex:strain 16 2380.1481 148.7593 1.1369 0.338
Residuals 77 10075.0 130.8442


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 55.0 4.0825   4 2.0412 0.0742 50.0, 60.0 -0.46
CC002/UncJ m 58.33 10.408   3 6.0093 0.1784 50.0, 70.0 -0.42
CC003/UncJ f 58.75 4.7871   4 2.3936 0.0815 55.0, 65.0 -0.24
CC003/UncJ m 68.33 12.583   3 7.2648 0.1841 55.0, 80.0 0.13
CC004/TauUncJ f 72.5 9.5743   4 4.7871 0.1321 65.0, 85.0 0.53
CC004/TauUncJ m 71.25 2.5   4 1.25 0.0351 70.0, 75.0 0.29
CC006/TauUncJ f 85.0 21.213   2   15.0 0.2496 70.0, 100.0 1.23
CC006/TauUncJ m 82.5 21.794   4 10.897 0.2642 55.0, 100.0 0.91
CC009/UncJ f 70.0 10.801   4 5.4006 0.1543 55.0, 80.0 0.39
CC009/UncJ m 80.0 24.495   4 12.247 0.3062 50.0, 100.0 0.77
CC010/GeniUncJ f 60.0 14.142   2   10.0 0.2357 50.0, 70.0 -0.17
CC013/GeniUncJ f 88.33 10.408   3 6.0093 0.1178 80.0, 100.0 1.42
CC013/GeniUncJ m 75.0 0.0   2   0.0 0.0 75.0, 75.0 0.5
CC017/UncJ f 28.333 5.7735   3 3.3333 0.2038 25.0, 35.0 -1.96
CC017/UncJ m 30.0 0.0   2   0.0 0.0 30.0, 30.0 -1.97
CC018/UncJ f 65.0 8.6603   3 5.0 0.1332 60.0, 75.0 0.11
CC018/UncJ m 62.5 3.5355   2   2.5 0.0566 60.0, 65.0 -0.19
CC019/TauUncJ f 45.0 5.0   3 2.8868 0.1111 40.0, 50.0 -1.02
CC019/TauUncJ m 48.75 7.5   4 3.75 0.1538 40.0, 55.0 -0.94
CC024/GeniUncJ f 51.67 7.6376   3 4.4096 0.1478 45.0, 60.0 -0.64
CC024/GeniUncJ m 51.25 20.156   4 10.078 0.3933 30.0, 75.0 -0.8
CC025/GeniUncJ f 55.0 7.0711   2   5.0 0.1286 50.0, 60.0 -0.46
CC025/GeniUncJ m 75.0 8.165   4 4.0825 0.1089 65.0, 85.0 0.5
CC026/GeniUncJ f 40.0 0.0   3 0.0 0.0 40.0, 40.0 -1.3
CC026/GeniUncJ m 55.0 7.0711   4 3.5355 0.1286 50.0, 65.0 -0.6
CC032/GeniUncJ f 96.25 7.5   4 3.75 0.0779 85.0, 100.0 1.87
CC032/GeniUncJ m 100.0 0.0   4 0.0 0.0 100.0, 100.0 1.87
CC040/TauUncJ f 80.0 14.72   4 7.3598 0.184 65.0, 100.0 0.95
CC040/TauUncJ m 95.0 7.0711   2   5.0 0.0744 90.0, 100.0 1.59
CC041/TauUncJ f 76.25 16.52   4 8.2601 0.2167 65.0, 100.0 0.74
CC041/TauUncJ m 68.75 4.7871   4 2.3936 0.0696 65.0, 75.0 0.15
CC051/TauUncJ f 58.75 14.361   4 7.1807 0.2444 40.0, 75.0 -0.24
CC051/TauUncJ m 41.667 2.8868   3 1.6667 0.0693 40.0, 45.0 -1.33
CC068/TauUncJ f 50.0 14.142   2   10.0 0.2828 40.0, 60.0 -0.74
CC068/TauUncJ m 57.5 10.607   2   7.5 0.1845 50.0, 65.0 -0.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 55.0 5.7194 66.3887 43.6113
CC002/UncJ m 58.3333 6.6041 71.4839 45.1828
CC003/UncJ f 58.75 5.7194 70.1387 47.3613
CC003/UncJ m 68.3333 6.6041 81.4839 55.1828
CC004/TauUncJ f 72.5 5.7194 83.8887 61.1113
CC004/TauUncJ m 71.25 5.7194 82.6387 59.8613
CC006/TauUncJ f 85.0 8.0884 101.106 68.894
CC006/TauUncJ m 82.5 5.7194 93.8887 71.1113
CC009/UncJ f 70.0 5.7194 81.3887 58.6113
CC009/UncJ m 80.0 5.7194 91.3887 68.6113
CC013/GeniUncJ f 88.3333 6.6041 101.4839 75.1828
CC013/GeniUncJ m 75.0 8.0884 91.106 58.894
CC017/UncJ f 28.3333 6.6041 41.4839 15.1828
CC017/UncJ m 30.0 8.0884 46.106 13.894
CC018/UncJ f 65.0 6.6041 78.1505 51.8495
CC018/UncJ m 62.5 8.0884 78.606 46.394
CC019/TauUncJ f 45.0 6.6041 58.1505 31.8495
CC019/TauUncJ m 48.75 5.7194 60.1387 37.3613
CC024/GeniUncJ f 51.6667 6.6041 64.8172 38.5161
CC024/GeniUncJ m 51.25 5.7194 62.6387 39.8613
CC025/GeniUncJ f 55.0 8.0884 71.106 38.894
CC025/GeniUncJ m 75.0 5.7194 86.3887 63.6113
CC026/GeniUncJ f 40.0 6.6041 53.1505 26.8495
CC026/GeniUncJ m 55.0 5.7194 66.3887 43.6113
CC032/GeniUncJ f 96.25 5.7194 107.6387 84.8613
CC032/GeniUncJ m 100.0 5.7194 111.3887 88.6113
CC040/TauUncJ f 80.0 5.7194 91.3887 68.6113
CC040/TauUncJ m 95.0 8.0884 111.106 78.894
CC041/TauUncJ f 76.25 5.7194 87.6387 64.8613
CC041/TauUncJ m 68.75 5.7194 80.1387 57.3613
CC051/TauUncJ f 58.75 5.7194 70.1387 47.3613
CC051/TauUncJ m 41.6667 6.6041 54.8172 28.5161
CC068/TauUncJ f 50.0 8.0884 66.106 33.894
CC068/TauUncJ m 57.5 8.0884 73.606 41.394


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 56.6667 4.3682 65.3649 47.9684
CC003/UncJ both 63.5417 4.3682 72.2399 54.8434
CC004/TauUncJ both 71.875 4.0442 79.928 63.822
CC006/TauUncJ both 83.75 4.9531 93.6129 73.8871
CC009/UncJ both 75.0 4.0442 83.053 66.947
CC013/GeniUncJ both 81.6667 5.221 92.0631 71.2703
CC017/UncJ both 29.1667 5.221 39.5631 18.7703
CC018/UncJ both 63.75 5.221 74.1464 53.3536
CC019/TauUncJ both 46.875 4.3682 55.5733 38.1767
CC024/GeniUncJ both 51.4583 4.3682 60.1566 42.7601
CC025/GeniUncJ both 65.0 4.9531 74.8629 55.1371
CC026/GeniUncJ both 47.5 4.3682 56.1983 38.8017
CC032/GeniUncJ both 98.125 4.0442 106.178 90.072
CC040/TauUncJ both 87.5 4.9531 97.3629 77.6371
CC041/TauUncJ both 72.5 4.0442 80.553 64.447
CC051/TauUncJ both 50.2083 4.3682 58.9066 41.5101
CC068/TauUncJ both 53.75 5.7194 65.1387 42.3613




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA