Project measure / variable:   JaxCC1   rears_4

ID, description, units MPD:89007   rears_4   number of rears, 20 min test   [n]  4th 5min  
Data set, strains JaxCC1   CC   17 strains     sex: both     age: 7-9wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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JaxCC1 - number of rears, 20 min test 4th 5min



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested17 strains17 strains
Mean of the strain means20.324   n 20.664   n
Median of the strain means20.8   n 20.286   n
SD of the strain means± 7.813 ± 7.8534
Coefficient of variation (CV)0.3844 0.3801
Min–max range of strain means5.25   –   33.25   n 5.75   –   38.875   n
Mean sample size per strain7.0   mice 7.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4.1681 4.1681 0.0529 0.8183
strain 16 12660.9235 791.3077 10.0417 < 0.0001
sex:strain 16 2427.8707 151.7419 1.9256 0.0197
Residuals 211 16627.3071 78.8024


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 13.375 4.3074   8 1.5229 0.322 9.0, 21.0 -0.89
CC002/UncJ m 20.286 12.593   7 4.7595 0.6208 2.0, 35.0 -0.05
CC003/UncJ f 20.8 9.2844   5 4.1521 0.4464 13.0, 36.0 0.06
CC003/UncJ m 23.0 2.582   4 1.291 0.1123 20.0, 26.0 0.3
CC004/TauUncJ f 29.0 7.3679   8 2.6049 0.2541 18.0, 40.0 1.11
CC004/TauUncJ m 30.875 7.3764   8 2.6079 0.2389 22.0, 40.0 1.3
CC006/TauUncJ f 20.75 4.5   4 2.25 0.2169 15.0, 26.0 0.05
CC006/TauUncJ m 19.625 13.437   8 4.7507 0.6847 7.0, 47.0 -0.13
CC009/UncJ f 13.667 9.136   6 3.7298 0.6685 2.0, 30.0 -0.85
CC009/UncJ m 22.875 12.38   8 4.377 0.5412 3.0, 47.0 0.28
CC013/GeniUncJ f 28.5 12.259   8 4.3342 0.4301 11.0, 47.0 1.05
CC013/GeniUncJ m 24.25 13.598   4 6.7992 0.5608 13.0, 44.0 0.46
CC017/UncJ f 15.333 12.723   6 5.194 0.8297 3.0, 39.0 -0.64
CC017/UncJ m 17.8 10.545   5 4.7159 0.5924 3.0, 31.0 -0.36
CC018/UncJ f 33.25 7.9955   8 2.8268 0.2405 22.0, 43.0 1.65
CC018/UncJ m 38.875 8.0965   8 2.8626 0.2083 22.0, 47.0 2.32
CC019/TauUncJ f 22.0 9.396   8 3.322 0.4271 5.0, 35.0 0.21
CC019/TauUncJ m 17.25 6.7771   8 2.3961 0.3929 6.0, 28.0 -0.43
CC024/GeniUncJ f 10.286 3.2514   7 1.2289 0.3161 6.0, 15.0 -1.28
CC024/GeniUncJ m 21.0 10.81   8 3.8219 0.5148 1.0, 39.0 0.04
CC025/GeniUncJ f 27.167 12.75   6 5.2052 0.4693 15.0, 43.0 0.88
CC025/GeniUncJ m 15.375 11.952   8 4.2255 0.7773 1.0, 37.0 -0.67
CC026/GeniUncJ f 23.75 8.3109   8 2.9384 0.3499 9.0, 37.0 0.44
CC026/GeniUncJ m 30.0 8.3324   8 2.9459 0.2777 21.0, 47.0 1.19
CC032/GeniUncJ f 19.5 4.567   8 1.6147 0.2342 11.0, 26.0 -0.11
CC032/GeniUncJ m 15.625 6.0223   8 2.1292 0.3854 10.0, 26.0 -0.64
CC040/TauUncJ f 28.125 7.2395   8 2.5596 0.2574 22.0, 42.0 1.0
CC040/TauUncJ m 23.625 8.9433   8 3.1619 0.3786 8.0, 39.0 0.38
CC041/TauUncJ f 5.25 2.7124   8 0.95898 0.5166 2.0, 11.0 -1.93
CC041/TauUncJ m 5.75 5.203   8 1.8395 0.9049 1.0, 18.0 -1.9
CC051/TauUncJ f 23.75 12.407   8 4.3865 0.5224 1.0, 40.0 0.44
CC051/TauUncJ m 13.7 6.1473   10 1.9439 0.4487 5.0, 26.0 -0.89
CC068/TauUncJ f 11.0 4.7958   5 2.1448 0.436 4.0, 15.0 -1.19
CC068/TauUncJ m 11.375 4.7491   8 1.679 0.4175 5.0, 20.0 -1.18


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 13.375 3.1385 19.5619 7.1881
CC002/UncJ m 20.2857 3.3552 26.8998 13.6717
CC003/UncJ f 20.8 3.9699 28.6258 12.9742
CC003/UncJ m 23.0 4.4385 31.7496 14.2504
CC004/TauUncJ f 29.0 3.1385 35.1869 22.8131
CC004/TauUncJ m 30.875 3.1385 37.0619 24.6881
CC006/TauUncJ f 20.75 4.4385 29.4996 12.0004
CC006/TauUncJ m 19.625 3.1385 25.8119 13.4381
CC009/UncJ f 13.6667 3.624 20.8106 6.5227
CC009/UncJ m 22.875 3.1385 29.0619 16.6881
CC013/GeniUncJ f 28.5 3.1385 34.6869 22.3131
CC013/GeniUncJ m 24.25 4.4385 32.9996 15.5004
CC017/UncJ f 15.3333 3.624 22.4773 8.1894
CC017/UncJ m 17.8 3.9699 25.6258 9.9742
CC018/UncJ f 33.25 3.1385 39.4369 27.0631
CC018/UncJ m 38.875 3.1385 45.0619 32.6881
CC019/TauUncJ f 22.0 3.1385 28.1869 15.8131
CC019/TauUncJ m 17.25 3.1385 23.4369 11.0631
CC024/GeniUncJ f 10.2857 3.3552 16.8998 3.6717
CC024/GeniUncJ m 21.0 3.1385 27.1869 14.8131
CC025/GeniUncJ f 27.1667 3.624 34.3106 20.0227
CC025/GeniUncJ m 15.375 3.1385 21.5619 9.1881
CC026/GeniUncJ f 23.75 3.1385 29.9369 17.5631
CC026/GeniUncJ m 30.0 3.1385 36.1869 23.8131
CC032/GeniUncJ f 19.5 3.1385 25.6869 13.3131
CC032/GeniUncJ m 15.625 3.1385 21.8119 9.4381
CC040/TauUncJ f 28.125 3.1385 34.3119 21.9381
CC040/TauUncJ m 23.625 3.1385 29.8119 17.4381
CC041/TauUncJ f 5.25 3.1385 11.4369 -0.9369
CC041/TauUncJ m 5.75 3.1385 11.9369 -0.4369
CC051/TauUncJ f 23.75 3.1385 29.9369 17.5631
CC051/TauUncJ m 13.7 2.8072 19.2337 8.1663
CC068/TauUncJ f 11.0 3.9699 18.8258 3.1742
CC068/TauUncJ m 11.375 3.1385 17.5619 5.1881


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 16.8304 2.2972 21.3587 12.302
CC003/UncJ both 21.9 2.9775 27.7694 16.0306
CC004/TauUncJ both 29.9375 2.2193 34.3123 25.5627
CC006/TauUncJ both 20.1875 2.718 25.5455 14.8295
CC009/UncJ both 18.2708 2.3971 22.9961 13.5455
CC013/GeniUncJ both 26.375 2.718 31.733 21.017
CC017/UncJ both 16.5667 2.6877 21.8648 11.2685
CC018/UncJ both 36.0625 2.2193 40.4373 31.6877
CC019/TauUncJ both 19.625 2.2193 23.9998 15.2502
CC024/GeniUncJ both 15.6429 2.2972 20.1712 11.1145
CC025/GeniUncJ both 21.2708 2.3971 25.9961 16.5455
CC026/GeniUncJ both 26.875 2.2193 31.2498 22.5002
CC032/GeniUncJ both 17.5625 2.2193 21.9373 13.1877
CC040/TauUncJ both 25.875 2.2193 30.2498 21.5002
CC041/TauUncJ both 5.5 2.2193 9.8748 1.1252
CC051/TauUncJ both 18.725 2.1054 22.8753 14.5747
CC068/TauUncJ both 11.1875 2.5304 16.1755 6.1995




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA