Project measure / variable:   Shorter7   sperm_VSL_30

ID, description, units MPD:65742   sperm_VSL_30   sperm mean straight line velocity   [µm/s]  30 min  
Data set, strains Shorter7   CC RIX   28 strains     sex: m     age: 7-44wks
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  STRAIN COMPARISON PLOT
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Shorter7 - sperm mean straight line velocity 30 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means90.3   µm/s
Median of the strain means84.8   µm/s
SD of the strain means± 21.599
Coefficient of variation (CV)0.2392
Min–max range of strain means51.7   –   135.9   µm/s
Mean sample size per strain3.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 23 39803.6086 1730.5917 6.6902 < 0.0001
Residuals 81 20952.7657 258.6761


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 002) m 72.3 2.9698   2   2.1 0.0411 70.2, 74.4 -0.83
RIX:CC(001 x 011) m 81.3 18.578   3 10.726 0.2285 59.9, 93.3 -0.42
RIX:CC(001 x 018) m 80.6 16.048   7 6.0655 0.1991 66.6, 114.3 -0.45
RIX:CC(002 x 010) m 78.37 6.3406   3 3.6608 0.0809 71.4, 83.8 -0.55
RIX:CC(002 x 011) m 99.19 15.115   7 5.7131 0.1524 83.7, 125.3 0.41
RIX:CC(003 x 018) m 92.07 6.1175   3 3.5319 0.0664 85.7, 97.9 0.08
RIX:CC(008 x 013) m 107.8 18.628   8 6.5861 0.1728 81.5, 131.0 0.81
RIX:CC(008 x 021) m 75.26 17.345   7 6.5557 0.2305 44.5, 91.5 -0.7
RIX:CC(008 x 065) m 102.9 3.1607   3 1.8248 0.0307 99.9, 106.2 0.58
RIX:CC(010 x 001) m 51.7 0.0   1   0.0 0.0 51.7, 51.7 -1.79
RIX:CC(010 x 002) m 62.1 0.0   1   0.0 0.0 62.1, 62.1 -1.31
RIX:CC(010 x 011) m 97.46 17.707   7 6.6926 0.1817 67.7, 113.8 0.33
RIX:CC(011 x 003) m 125.6 5.9083   5 2.6423 0.0471 119.6, 134.6 1.63
RIX:CC(011 x 018) m 76.5 0.0   1   0.0 0.0 76.5, 76.5 -0.64
RIX:CC(013 x 053) m 88.3 0.0   1   0.0 0.0 88.3, 88.3 -0.09
RIX:CC(018 x 002) m 72.97 21.075   4 10.538 0.2888 41.9, 88.6 -0.8
RIX:CC(018 x 003) m 116.7 12.687   3 7.3249 0.1087 102.2, 125.9 1.22
RIX:CC(018 x 010) m 114.1 24.101   6 9.8393 0.2112 76.3, 142.2 1.1
RIX:CC(021 x 065) m 116.1 15.352   4 7.6758 0.1323 98.1, 133.7 1.19
RIX:CC(034 x 008) m 76.3 23.052   2   16.3 0.3021 60.0, 92.6 -0.65
RIX:CC(034 x 021) m 95.2 7.5635   4 3.7818 0.0794 87.7, 104.6 0.23
RIX:CC(034 x 053) m 135.9 7.2493   5 3.242 0.0533 126.4, 146.5 2.11
RIX:CC(053 x 021) m 81.02 20.097   5 8.9877 0.2481 56.3, 103.1 -0.43
RIX:CC(053 x 034) m 69.7 17.785   3 10.268 0.2552 49.2, 81.0 -0.95
RIX:CC(065 x 008) m 90.03 14.93   4 7.4651 0.1658 70.6, 106.1 -0.01
RIX:CC(065 x 013) m 68.67 17.828   4 8.9142 0.2596 44.6, 87.5 -1.0
RIX:CC(065 x 034) m 70.92 15.682   4 7.841 0.2211 56.3, 93.1 -0.9
RIX:CC(065 x 053) m 129.3 10.96   2   7.75 0.0847 121.6, 137.1 1.81


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 002) m 72.3 11.3727 94.9281 49.6719
RIX:CC(001 x 011) m 81.3 9.2858 99.7758 62.8242
RIX:CC(001 x 018) m 80.6 6.079 92.6952 68.5048
RIX:CC(002 x 010) m 78.3667 9.2858 96.8424 59.8909
RIX:CC(002 x 011) m 99.1857 6.079 111.2809 87.0905
RIX:CC(003 x 018) m 92.0667 9.2858 110.5424 73.5909
RIX:CC(008 x 013) m 107.775 5.6863 119.089 96.461
RIX:CC(008 x 021) m 75.2571 6.079 87.3524 63.1619
RIX:CC(008 x 065) m 102.9 9.2858 121.3758 84.4242
RIX:CC(010 x 011) m 97.4571 6.079 109.5524 85.3619
RIX:CC(011 x 003) m 125.56 7.1927 139.8713 111.2487
RIX:CC(018 x 002) m 72.975 8.0417 88.9755 56.9745
RIX:CC(018 x 003) m 116.6667 9.2858 135.1424 98.1909
RIX:CC(018 x 010) m 114.1333 6.566 127.1977 101.069
RIX:CC(021 x 065) m 116.075 8.0417 132.0755 100.0745
RIX:CC(034 x 008) m 76.3 11.3727 98.9281 53.6719
RIX:CC(034 x 021) m 95.2 8.0417 111.2005 79.1995
RIX:CC(034 x 053) m 135.94 7.1927 150.2513 121.6287
RIX:CC(053 x 021) m 81.02 7.1927 95.3313 66.7087
RIX:CC(053 x 034) m 69.7 9.2858 88.1758 51.2242
RIX:CC(065 x 008) m 90.025 8.0417 106.0255 74.0245
RIX:CC(065 x 013) m 68.675 8.0417 84.6755 52.6745
RIX:CC(065 x 034) m 70.925 8.0417 86.9255 54.9245
RIX:CC(065 x 053) m 129.35 11.3727 151.9781 106.7219




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA