Project measure / variable:   Shorter7   sperm_slow_30

ID, description, units MPD:65727   sperm_slow_30   percentage of motile sperm that are 'slow'   [%]  30 min  
Data set, strains Shorter7   CC RIX   28 strains     sex: m     age: 7-44wks
Procedure microscopy
Ontology mappings

  STRAIN COMPARISON PLOT
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Shorter7 - percentage of motile sperm that are 'slow' 30 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means31.087   %
Median of the strain means29.164   %
SD of the strain means± 10.848
Coefficient of variation (CV)0.349
Min–max range of strain means14.433   –   50.2   %
Mean sample size per strain3.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 23 11244.7517 488.9022 7.9459 < 0.0001
Residuals 81 4983.8335 61.5288


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 002) m 50.2 4.8083   2   3.4 0.0958 46.8, 53.6 1.76
RIX:CC(001 x 011) m 42.3 8.9538   3 5.1695 0.2117 33.2, 51.1 1.03
RIX:CC(001 x 018) m 22.157 7.7627   7 2.934 0.3503 12.9, 35.9 -0.82
RIX:CC(002 x 010) m 40.567 14.434   3 8.3333 0.3558 23.9, 48.9 0.87
RIX:CC(002 x 011) m 37.8 8.0482   7 3.0419 0.2129 26.3, 50.6 0.62
RIX:CC(003 x 018) m 14.433 2.2301   3 1.2875 0.1545 11.9, 16.1 -1.54
RIX:CC(008 x 013) m 14.688 6.5875   8 2.329 0.4485 9.0, 25.7 -1.51
RIX:CC(008 x 021) m 28.043 6.5151   7 2.4625 0.2323 20.6, 37.8 -0.28
RIX:CC(008 x 065) m 40.233 2.3094   3 1.3333 0.0574 38.9, 42.9 0.84
RIX:CC(010 x 001) m 43.5 0.0   1   0.0 0.0 43.5, 43.5 1.14
RIX:CC(010 x 002) m 35.2 0.0   1   0.0 0.0 35.2, 35.2 0.38
RIX:CC(010 x 011) m 28.429 8.6139   7 3.2557 0.303 15.1, 39.3 -0.25
RIX:CC(011 x 003) m 20.12 8.665   5 3.8751 0.4307 5.5, 28.5 -1.01
RIX:CC(011 x 018) m 16.3 0.0   1   0.0 0.0 16.3, 16.3 -1.36
RIX:CC(013 x 053) m 23.4 0.0   1   0.0 0.0 23.4, 23.4 -0.71
RIX:CC(018 x 002) m 42.225 2.2867   4 1.1434 0.0542 39.5, 44.8 1.03
RIX:CC(018 x 003) m 24.067 9.0886   3 5.2473 0.3776 15.5, 33.6 -0.65
RIX:CC(018 x 010) m 18.95 4.6496   6 1.8982 0.2454 14.9, 25.6 -1.12
RIX:CC(021 x 065) m 23.325 13.142   4 6.5708 0.5634 10.8, 41.8 -0.72
RIX:CC(034 x 008) m 38.2 13.576   2   9.6 0.3554 28.6, 47.8 0.66
RIX:CC(034 x 021) m 25.6 11.632   4 5.8161 0.4544 16.2, 40.6 -0.51
RIX:CC(034 x 053) m 17.94 2.4048   5 1.0755 0.134 14.6, 20.7 -1.21
RIX:CC(053 x 021) m 37.24 10.317   5 4.6141 0.2771 21.7, 47.3 0.57
RIX:CC(053 x 034) m 29.9 9.3504   3 5.3985 0.3127 20.5, 39.2 -0.11
RIX:CC(065 x 008) m 42.675 6.4132   4 3.2066 0.1503 33.9, 49.0 1.07
RIX:CC(065 x 013) m 46.875 5.6976   4 2.8488 0.1215 40.2, 53.6 1.46
RIX:CC(065 x 034) m 42.825 4.3554   4 2.1777 0.1017 36.3, 45.2 1.08
RIX:CC(065 x 053) m 23.25 3.182   2   2.25 0.1369 21.0, 25.5 -0.72


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 002) m 50.2 5.5466 61.2359 39.1641
RIX:CC(001 x 011) m 42.3 4.5288 51.3108 33.2892
RIX:CC(001 x 018) m 22.1571 2.9648 28.0561 16.2582
RIX:CC(002 x 010) m 40.5667 4.5288 49.5775 31.5559
RIX:CC(002 x 011) m 37.8 2.9648 43.699 31.901
RIX:CC(003 x 018) m 14.4333 4.5288 23.4441 5.4225
RIX:CC(008 x 013) m 14.6875 2.7733 20.2055 9.1695
RIX:CC(008 x 021) m 28.0429 2.9648 33.9418 22.1439
RIX:CC(008 x 065) m 40.2333 4.5288 49.2441 31.2225
RIX:CC(010 x 011) m 28.4286 2.9648 34.3275 22.5296
RIX:CC(011 x 003) m 20.12 3.508 27.0997 13.1403
RIX:CC(018 x 002) m 42.225 3.922 50.0286 34.4214
RIX:CC(018 x 003) m 24.0667 4.5288 33.0775 15.0559
RIX:CC(018 x 010) m 18.95 3.2023 25.3216 12.5784
RIX:CC(021 x 065) m 23.325 3.922 31.1286 15.5214
RIX:CC(034 x 008) m 38.2 5.5466 49.2359 27.1641
RIX:CC(034 x 021) m 25.6 3.922 33.4036 17.7964
RIX:CC(034 x 053) m 17.94 3.508 24.9197 10.9603
RIX:CC(053 x 021) m 37.24 3.508 44.2197 30.2603
RIX:CC(053 x 034) m 29.9 4.5288 38.9108 20.8892
RIX:CC(065 x 008) m 42.675 3.922 50.4786 34.8714
RIX:CC(065 x 013) m 46.875 3.922 54.6786 39.0714
RIX:CC(065 x 034) m 42.825 3.922 50.6286 35.0214
RIX:CC(065 x 053) m 23.25 5.5466 34.2859 12.2141




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA