Project measure / variable:   Shorter7   sperm_int_90

ID, description, units MPD:65724   sperm_int_90   percentage of motile sperm that are 'intermediate'   [%]  90 min  
Data set, strains Shorter7   CC RIX   27 strains     sex: m     age: 7-44wks
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  STRAIN COMPARISON PLOT
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Shorter7 - percentage of motile sperm that are 'intermediate' 90 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested27 strains
Mean of the strain means4.5565   %
Median of the strain means4.2   %
SD of the strain means± 1.862
Coefficient of variation (CV)0.4087
Min–max range of strain means1.8667   –   9.175   %
Mean sample size per strain4.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 23 302.5604 13.1548 3.7905 < 0.0001
Residuals 82 284.5797 3.4705


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 002) m 2.75 0.07071   2   0.05 0.0257 2.7, 2.8 -0.97
RIX:CC(001 x 011) m 3.8 1.9468   3 1.124 0.5123 2.3, 6.0 -0.41
RIX:CC(001 x 018) m 4.7 2.4691   7 0.93325 0.5253 1.1, 8.2 0.08
RIX:CC(002 x 010) m 3.3333 0.56862   3 0.3283 0.1706 2.7, 3.8 -0.66
RIX:CC(002 x 011) m 6.4143 1.2075   7 0.4564 0.1883 4.3, 8.2 1.0
RIX:CC(003 x 018) m 3.1 2.3735   4 1.1867 0.7656 0.2, 6.0 -0.78
RIX:CC(008 x 013) m 6.4375 2.7995   8 0.98976 0.4349 1.9, 9.5 1.01
RIX:CC(008 x 021) m 5.4 0.9434   7 0.35657 0.1747 4.3, 6.7 0.45
RIX:CC(008 x 065) m 3.2 0.52915   3 0.30551 0.1654 2.8, 3.8 -0.73
RIX:CC(010 x 002) m 4.2 0.0   1   0.0 0.0 4.2, 4.2 -0.19
RIX:CC(010 x 011) m 4.6143 2.0029   7 0.75701 0.4341 2.9, 8.4 0.03
RIX:CC(011 x 003) m 5.74 1.9578   5 0.87556 0.3411 3.3, 7.9 0.64
RIX:CC(011 x 018) m 2.8 0.0   1   0.0 0.0 2.8, 2.8 -0.94
RIX:CC(013 x 053) m 6.7 0.0   1   0.0 0.0 6.7, 6.7 1.15
RIX:CC(018 x 002) m 2.55 1.0661   4 0.53307 0.4181 1.4, 3.9 -1.08
RIX:CC(018 x 003) m 6.5667 1.222   3 0.70553 0.1861 5.5, 7.9 1.08
RIX:CC(018 x 010) m 3.2667 1.4362   6 0.58633 0.4397 1.6, 5.6 -0.69
RIX:CC(021 x 065) m 9.175 3.0804   4 1.5402 0.3357 5.1, 12.1 2.48
RIX:CC(034 x 008) m 8.8 0.42426   2   0.3 0.0482 8.5, 9.1 2.28
RIX:CC(034 x 021) m 2.725 1.3401   4 0.67004 0.4918 1.8, 4.7 -0.98
RIX:CC(034 x 053) m 4.98 1.7768   5 0.79461 0.3568 2.8, 7.7 0.23
RIX:CC(053 x 021) m 3.58 1.4601   5 0.65299 0.4079 1.7, 5.4 -0.52
RIX:CC(053 x 034) m 1.8667 1.6197   3 0.93512 0.8677 -1.44
RIX:CC(065 x 008) m 4.05 1.3675   4 0.68374 0.3376 2.6, 5.9 -0.27
RIX:CC(065 x 013) m 2.875 1.3841   4 0.69207 0.4814 1.4, 4.2 -0.9
RIX:CC(065 x 034) m 4.65 2.8989   4 1.4494 0.6234 2.8, 8.9 0.05
RIX:CC(065 x 053) m 4.75 0.49497   2   0.35 0.1042 4.4, 5.1 0.1


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 002) m 2.75 1.3173 5.3705 0.1295
RIX:CC(001 x 011) m 3.8 1.0756 5.9396 1.6604
RIX:CC(001 x 018) m 4.7 0.7041 6.1007 3.2993
RIX:CC(002 x 010) m 3.3333 1.0756 5.473 1.1937
RIX:CC(002 x 011) m 6.4143 0.7041 7.815 5.0136
RIX:CC(003 x 018) m 3.1 0.9315 4.953 1.247
RIX:CC(008 x 013) m 6.4375 0.6586 7.7478 5.1272
RIX:CC(008 x 021) m 5.4 0.7041 6.8007 3.9993
RIX:CC(008 x 065) m 3.2 1.0756 5.3396 1.0604
RIX:CC(010 x 011) m 4.6143 0.7041 6.015 3.2136
RIX:CC(011 x 003) m 5.74 0.8331 7.3974 4.0826
RIX:CC(018 x 002) m 2.55 0.9315 4.403 0.697
RIX:CC(018 x 003) m 6.5667 1.0756 8.7063 4.427
RIX:CC(018 x 010) m 3.2667 0.7605 4.7796 1.7537
RIX:CC(021 x 065) m 9.175 0.9315 11.028 7.322
RIX:CC(034 x 008) m 8.8 1.3173 11.4205 6.1795
RIX:CC(034 x 021) m 2.725 0.9315 4.578 0.872
RIX:CC(034 x 053) m 4.98 0.8331 6.6374 3.3226
RIX:CC(053 x 021) m 3.58 0.8331 5.2374 1.9226
RIX:CC(053 x 034) m 1.8667 1.0756 4.0063 -0.273
RIX:CC(065 x 008) m 4.05 0.9315 5.903 2.197
RIX:CC(065 x 013) m 2.875 0.9315 4.728 1.022
RIX:CC(065 x 034) m 4.65 0.9315 6.503 2.797
RIX:CC(065 x 053) m 4.75 1.3173 7.3705 2.1295




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA