Project measure / variable:   Shorter7   sperm_int_30

ID, description, units MPD:65722   sperm_int_30   percentage of motile sperm that are 'intermediate'   [%]  30 min  
Data set, strains Shorter7   CC RIX   28 strains     sex: m     age: 7-44wks
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  STRAIN COMPARISON PLOT
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Shorter7 - percentage of motile sperm that are 'intermediate' 30 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means8.0091   %
Median of the strain means6.5175   %
SD of the strain means± 5.3603
Coefficient of variation (CV)0.6693
Min–max range of strain means2.15   –   21.467   %
Mean sample size per strain3.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 23 2295.0989 99.7869 3.7532 < 0.0001
Residuals 81 2153.5531 26.5871


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 002) m 2.5 0.56569   2   0.4 0.2263 2.1, 2.9 -1.03
RIX:CC(001 x 011) m 3.9 4.48   3 2.5865 1.1487 0.6, 9.0 -0.77
RIX:CC(001 x 018) m 10.871 5.049   7 1.9083 0.4644 4.7, 18.0 0.53
RIX:CC(002 x 010) m 5.6333 6.2939   3 3.6338 1.1173 1.9, 12.9 -0.44
RIX:CC(002 x 011) m 4.1143 2.663   7 1.0065 0.6473 1.0, 8.1 -0.73
RIX:CC(003 x 018) m 21.467 3.4034   3 1.965 0.1585 18.8, 25.3 2.51
RIX:CC(008 x 013) m 13.1 7.0116   8 2.479 0.5352 2.9, 25.3 0.95
RIX:CC(008 x 021) m 9.0857 4.1863   7 1.5823 0.4608 3.5, 14.0 0.2
RIX:CC(008 x 065) m 3.5667 0.15275   3 0.08819 0.0428 3.4, 3.7 -0.83
RIX:CC(010 x 001) m 2.6 0.0   1   0.0 0.0 2.6, 2.6 -1.01
RIX:CC(010 x 002) m 4.3 0.0   1   0.0 0.0 4.3, 4.3 -0.69
RIX:CC(010 x 011) m 8.0571 3.9845   7 1.506 0.4945 4.0, 14.1 0.01
RIX:CC(011 x 003) m 17.38 12.794   5 5.7217 0.7361 8.9, 39.5 1.75
RIX:CC(011 x 018) m 10.7 0.0   1   0.0 0.0 10.7, 10.7 0.5
RIX:CC(013 x 053) m 19.2 0.0   1   0.0 0.0 19.2, 19.2 2.09
RIX:CC(018 x 002) m 3.125 1.372   4 0.68602 0.4391 1.3, 4.6 -0.91
RIX:CC(018 x 003) m 13.967 9.4129   3 5.4346 0.674 6.7, 24.6 1.11
RIX:CC(018 x 010) m 9.8667 1.8662   6 0.76187 0.1891 7.3, 12.6 0.35
RIX:CC(021 x 065) m 11.7 5.6833   4 2.8417 0.4858 6.1, 19.3 0.69
RIX:CC(034 x 008) m 3.55 1.4849   2   1.05 0.4183 2.5, 4.6 -0.83
RIX:CC(034 x 021) m 5.875 0.80571   4 0.40285 0.1371 5.2, 7.0 -0.4
RIX:CC(034 x 053) m 9.96 1.8174   5 0.81277 0.1825 7.4, 12.5 0.36
RIX:CC(053 x 021) m 7.16 7.85   5 3.5106 1.0964 -0.16
RIX:CC(053 x 034) m 5.0 3.8743   3 2.2368 0.7749 2.1, 9.4 -0.56
RIX:CC(065 x 008) m 3.05 1.7311   4 0.86554 0.5676 1.8, 5.6 -0.93
RIX:CC(065 x 013) m 2.425 1.4361   4 0.71807 0.5922 0.8, 4.3 -1.04
RIX:CC(065 x 034) m 2.15 1.7898   4 0.89489 0.8325 0.9, 4.8 -1.09
RIX:CC(065 x 053) m 9.95 0.07071   2   0.05 0.0071 9.9, 10.0 0.36


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 002) m 2.5 3.646 9.7545 -4.7545
RIX:CC(001 x 011) m 3.9 2.977 9.8232 -2.0232
RIX:CC(001 x 018) m 10.8714 1.9489 14.7491 6.9938
RIX:CC(002 x 010) m 5.6333 2.977 11.5566 -0.2899
RIX:CC(002 x 011) m 4.1143 1.9489 7.992 0.2366
RIX:CC(003 x 018) m 21.4667 2.977 27.3899 15.5434
RIX:CC(008 x 013) m 13.1 1.823 16.7272 9.4728
RIX:CC(008 x 021) m 9.0857 1.9489 12.9634 5.208
RIX:CC(008 x 065) m 3.5667 2.977 9.4899 -2.3566
RIX:CC(010 x 011) m 8.0571 1.9489 11.9348 4.1795
RIX:CC(011 x 003) m 17.38 2.306 21.9681 12.7919
RIX:CC(018 x 002) m 3.125 2.5781 8.2547 -2.0047
RIX:CC(018 x 003) m 13.9667 2.977 19.8899 8.0434
RIX:CC(018 x 010) m 9.8667 2.105 14.055 5.6783
RIX:CC(021 x 065) m 11.7 2.5781 16.8297 6.5703
RIX:CC(034 x 008) m 3.55 3.646 10.8045 -3.7045
RIX:CC(034 x 021) m 5.875 2.5781 11.0047 0.7453
RIX:CC(034 x 053) m 9.96 2.306 14.5481 5.3719
RIX:CC(053 x 021) m 7.16 2.306 11.7481 2.5719
RIX:CC(053 x 034) m 5.0 2.977 10.9232 -0.9232
RIX:CC(065 x 008) m 3.05 2.5781 8.1797 -2.0797
RIX:CC(065 x 013) m 2.425 2.5781 7.5547 -2.7047
RIX:CC(065 x 034) m 2.15 2.5781 7.2797 -2.9797
RIX:CC(065 x 053) m 9.95 3.646 17.2045 2.6955




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA