Project measure / variable:   Peters2   cHGB

ID, description, units MPD:6518   cHGB   calculated hemoglobin (HGB)   [g/dL]  
Data set, strains Peters2   AXB BXA   28 strains     sex: both     age: 11wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters2 - calculated hemoglobin (HGB)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means13.8   g/dL 13.5   g/dL
Median of the strain means13.7   g/dL 13.2   g/dL
SD of the strain means± 0.794 ± 0.810
Coefficient of variation (CV)0.0576 0.0600
Min–max range of strain means12.3   –   15.0   g/dL 12.1   –   14.9   g/dL
Mean sample size per strain7.7   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 8.3925 8.3925 17.8906 < 0.0001
strain 27 227.228 8.4159 17.9404 < 0.0001
sex:strain 27 38.4367 1.4236 3.0347 < 0.0001
Residuals 393 184.357 0.4691


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
AXB10/PgnJ f 13.7 0.369   7 0.139 0.0269 13.3, 14.2 -0.12
AXB10/PgnJ m 12.1 0.21   8 0.0743 0.0173 11.9, 12.5 -1.73
AXB12/PgnJ f 14.5 1.25   10 0.394 0.0861 12.3, 16.4 0.89
AXB12/PgnJ m 14.6 0.746   8 0.264 0.0511 13.9, 16.3 1.35
AXB13/PgnJ f 15.0 0.614   8 0.217 0.0408 13.9, 15.7 1.52
AXB13/PgnJ m 14.5 0.393   8 0.139 0.027 13.7, 15.0 1.23
AXB15/PgnJ f 12.3 0.389   8 0.138 0.0316 11.8, 13.0 -1.88
AXB15/PgnJ m 12.7 0.46   8 0.162 0.0363 12.3, 13.6 -0.99
AXB19a/PgnJ f 14.2 1.24   8 0.44 0.0877 12.5, 16.1 0.51
AXB19a/PgnJ m 13.8 0.579   8 0.205 0.042 13.1, 14.9 0.37
AXB19b/PgnJ f 14.7 0.725   7 0.274 0.0495 13.3, 15.7 1.14
AXB19b/PgnJ m 14.4 0.612   8 0.216 0.0425 13.1, 15.1 1.11
AXB19/PgnJ f 13.4 0.612   8 0.216 0.0455 12.7, 14.2 -0.49
AXB19/PgnJ m 13.3 0.754   8 0.266 0.0568 12.2, 14.1 -0.25
AXB1/PgnJ f 15.0 1.28   5 0.571 0.0848 13.0, 16.2 1.52
AXB1/PgnJ m 12.8 0.688   8 0.243 0.0537 11.8, 13.7 -0.87
AXB23/PgnJ f 15.0 0.522   5 0.233 0.0348 14.4, 15.8 1.52
AXB23/PgnJ m 14.9 0.552   7 0.209 0.037 14.1, 15.8 1.72
AXB24/PgnJ f 12.8 0.794   8 0.281 0.0619 11.9, 14.1 -1.25
AXB24/PgnJ m 13.7 0.878   8 0.311 0.0641 12.6, 15.6 0.24
AXB2/PgnJ f 14.6 0.56   8 0.198 0.0383 14.0, 15.6 1.02
AXB2/PgnJ m 14.2 0.631   8 0.223 0.0445 13.1, 14.9 0.86
AXB4/PgnJ f 13.9 0.742   6 0.303 0.0535 12.5, 14.7 0.13
AXB4/PgnJ m 14.0 0.469   9 0.156 0.0336 13.1, 14.5 0.61
AXB5/PgnJ f 14.9 0.321   7 0.121 0.0216 14.5, 15.2 1.39
AXB5/PgnJ m 14.1 0.706   7 0.267 0.05 13.0, 15.1 0.74
AXB6/PgnJ f 14.5 1.04   7 0.393 0.0714 12.5, 15.5 0.89
AXB6/PgnJ m 14.8 0.703   6 0.287 0.0475 13.9, 15.7 1.6
AXB8/PgnJ f 13.2 1.09   7 0.413 0.0827 10.9, 14.1 -0.75
AXB8/PgnJ m 12.8 0.739   8 0.261 0.0579 11.3, 13.6 -0.87
BXA11/PgnJ f 13.2 0.311   8 0.11 0.0235 12.8, 13.7 -0.75
BXA11/PgnJ m 13.2 0.577   8 0.204 0.0437 12.7, 14.5 -0.37
BXA12/PgnJ f 12.9 0.46   8 0.162 0.0357 12.2, 13.5 -1.12
BXA12/PgnJ m 12.7 0.439   8 0.155 0.0345 11.7, 13.1 -0.99
BXA13/PgnJ f 14.4 0.719   8 0.254 0.0499 13.4, 15.4 0.76
BXA13/PgnJ m 14.4 0.354   8 0.125 0.0245 14.0, 15.0 1.11
BXA14/PgnJ f 13.1 0.434   8 0.154 0.0331 12.3, 13.6 -0.87
BXA14/PgnJ m 12.8 0.394   8 0.139 0.0308 12.3, 13.4 -0.87
BXA16/PgnJ f 13.0 0.441   8 0.156 0.0338 12.2, 13.7 -1.0
BXA16/PgnJ m 13.2 0.434   8 0.153 0.033 12.6, 13.9 -0.37
BXA1/PgnJ f 14.1 0.831   8 0.294 0.059 12.7, 15.2 0.39
BXA1/PgnJ m 12.7 0.24   6 0.098 0.0189 12.5, 13.1 -0.99
BXA24/PgnJ f 13.7 1.56   8 0.552 0.114 12.1, 15.7 -0.12
BXA24/PgnJ m 12.8 0.58   8 0.205 0.0455 12.0, 13.7 -0.87
BXA25/PgnJ f 12.8 0.392   8 0.139 0.0307 12.0, 13.2 -1.25
BXA25/PgnJ m 12.4 0.64   8 0.226 0.0516 11.0, 13.0 -1.36
BXA26/PgnJ f 14.1 0.794   9 0.265 0.0565 13.3, 16.0 0.39
BXA26/PgnJ m 14.3 1.06   7 0.4 0.074 13.0, 15.6 0.98
BXA2/PgnJ f 13.3 0.513   8 0.181 0.0384 12.4, 14.2 -0.62
BXA2/PgnJ m 13.0 0.6   10 0.19 0.046 12.2, 13.9 -0.62
BXA4/PgnJ f 13.0 0.518   8 0.183 0.0399 12.2, 13.7 -1.0
BXA4/PgnJ m 13.0 0.716   8 0.253 0.055 11.9, 14.0 -0.62
BXA7/PgnJ f 13.7 0.249   8 0.0881 0.0182 13.4, 14.1 -0.12
BXA7/PgnJ m 14.0 0.424   8 0.15 0.0304 13.5, 14.8 0.61
BXA8/PgnJ f 13.2 0.542   16 0.136 0.0412 11.8, 13.9 -0.75
BXA8/PgnJ m 12.9 0.633   15 0.163 0.0491 11.6, 13.9 -0.74


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ f 13.7429 0.2589 14.2518 13.2339
AXB10/PgnJ m 12.1125 0.2422 12.5886 11.6364
AXB12/PgnJ f 14.48 0.2166 14.9058 14.0542
AXB12/PgnJ m 14.6 0.2422 15.0761 14.1239
AXB13/PgnJ f 15.0375 0.2422 15.5136 14.5614
AXB13/PgnJ m 14.5375 0.2422 15.0136 14.0614
AXB15/PgnJ f 12.3 0.2422 12.7761 11.8239
AXB15/PgnJ m 12.6625 0.2422 13.1386 12.1864
AXB19a/PgnJ f 14.1875 0.2422 14.6636 13.7114
AXB19a/PgnJ m 13.7875 0.2422 14.2636 13.3114
AXB19b/PgnJ f 14.6571 0.2589 15.1661 14.1482
AXB19b/PgnJ m 14.4 0.2422 14.8761 13.9239
AXB19/PgnJ f 13.4375 0.2422 13.9136 12.9614
AXB19/PgnJ m 13.275 0.2422 13.7511 12.7989
AXB1/PgnJ f 15.04 0.3063 15.6422 14.4378
AXB1/PgnJ m 12.825 0.2422 13.3011 12.3489
AXB23/PgnJ f 14.98 0.3063 15.5822 14.3778
AXB23/PgnJ m 14.9143 0.2589 15.4232 14.4053
AXB24/PgnJ f 12.825 0.2422 13.3011 12.3489
AXB24/PgnJ m 13.7 0.2422 14.1761 13.2239
AXB2/PgnJ f 14.625 0.2422 15.1011 14.1489
AXB2/PgnJ m 14.1875 0.2422 14.6636 13.7114
AXB4/PgnJ f 13.8667 0.2796 14.4164 13.3169
AXB4/PgnJ m 13.9556 0.2283 14.4044 13.5067
AXB5/PgnJ f 14.8571 0.2589 15.3661 14.3482
AXB5/PgnJ m 14.1286 0.2589 14.6375 13.6196
AXB6/PgnJ f 14.5429 0.2589 15.0518 14.0339
AXB6/PgnJ m 14.7833 0.2796 15.3331 14.2336
AXB8/PgnJ f 13.2143 0.2589 13.7232 12.7053
AXB8/PgnJ m 12.75 0.2422 13.2261 12.2739
BXA11/PgnJ f 13.2375 0.2422 13.7136 12.7614
BXA11/PgnJ m 13.1875 0.2422 13.6636 12.7114
BXA12/PgnJ f 12.8625 0.2422 13.3386 12.3864
BXA12/PgnJ m 12.7125 0.2422 13.1886 12.2364
BXA13/PgnJ f 14.4 0.2422 14.8761 13.9239
BXA13/PgnJ m 14.4375 0.2422 14.9136 13.9614
BXA14/PgnJ f 13.1 0.2422 13.5761 12.6239
BXA14/PgnJ m 12.7875 0.2422 13.2636 12.3114
BXA16/PgnJ f 13.0375 0.2422 13.5136 12.5614
BXA16/PgnJ m 13.1625 0.2422 13.6386 12.6864
BXA1/PgnJ f 14.075 0.2422 14.5511 13.5989
BXA1/PgnJ m 12.7167 0.2796 13.2664 12.1669
BXA24/PgnJ f 13.675 0.2422 14.1511 13.1989
BXA24/PgnJ m 12.7625 0.2422 13.2386 12.2864
BXA25/PgnJ f 12.775 0.2422 13.2511 12.2989
BXA25/PgnJ m 12.4125 0.2422 12.8886 11.9364
BXA26/PgnJ f 14.0556 0.2283 14.5044 13.6067
BXA26/PgnJ m 14.2857 0.2589 14.7947 13.7768
BXA2/PgnJ f 13.35 0.2422 13.8261 12.8739
BXA2/PgnJ m 13.04 0.2166 13.4658 12.6142
BXA4/PgnJ f 12.975 0.2422 13.4511 12.4989
BXA4/PgnJ m 13.0125 0.2422 13.4886 12.5364
BXA7/PgnJ f 13.675 0.2422 14.1511 13.1989
BXA7/PgnJ m 13.9625 0.2422 14.4386 13.4864
BXA8/PgnJ f 13.175 0.1712 13.5116 12.8384
BXA8/PgnJ m 12.88 0.1768 13.2277 12.5323


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ both 12.9277 0.1772 13.2761 12.5792
AXB12/PgnJ both 14.54 0.1624 14.8594 14.2206
AXB13/PgnJ both 14.7875 0.1712 15.1241 14.4509
AXB15/PgnJ both 12.4813 0.1712 12.8179 12.1446
AXB19a/PgnJ both 13.9875 0.1712 14.3241 13.6509
AXB19b/PgnJ both 14.5286 0.1772 14.877 14.1801
AXB19/PgnJ both 13.3562 0.1712 13.6929 13.0196
AXB1/PgnJ both 13.9325 0.1952 14.3163 13.5487
AXB23/PgnJ both 14.9471 0.2005 15.3414 14.5529
AXB24/PgnJ both 13.2625 0.1712 13.5991 12.9259
AXB2/PgnJ both 14.4062 0.1712 14.7429 14.0696
AXB4/PgnJ both 13.9111 0.1805 14.266 13.5563
AXB5/PgnJ both 14.4929 0.183 14.8527 14.133
AXB6/PgnJ both 14.6631 0.1905 15.0377 14.2885
AXB8/PgnJ both 12.9821 0.1772 13.3306 12.6337
BXA11/PgnJ both 13.2125 0.1712 13.5491 12.8759
BXA12/PgnJ both 12.7875 0.1712 13.1241 12.4509
BXA13/PgnJ both 14.4187 0.1712 14.7554 14.0821
BXA14/PgnJ both 12.9437 0.1712 13.2804 12.6071
BXA16/PgnJ both 13.1 0.1712 13.4366 12.7634
BXA1/PgnJ both 13.3958 0.1849 13.7594 13.0322
BXA24/PgnJ both 13.2187 0.1712 13.5554 12.8821
BXA25/PgnJ both 12.5937 0.1712 12.9304 12.2571
BXA26/PgnJ both 14.1706 0.1726 14.5099 13.8313
BXA2/PgnJ both 13.195 0.1624 13.5144 12.8756
BXA4/PgnJ both 12.9937 0.1712 13.3304 12.6571
BXA7/PgnJ both 13.8187 0.1712 14.1554 13.4821
BXA8/PgnJ both 13.0275 0.1231 13.2695 12.7855




  GWAS USING LINEAR MIXED MODELS