Project measure / variable:   Peters2   CHCM

ID, description, units MPD:6508   CHCM   RBC corpuscular hemoglobin concentration mean (CHCM)   [g/dL]  
Data set, strains Peters2   AXB BXA   28 strains     sex: both     age: 11wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters2 - RBC corpuscular hemoglobin concentration mean (CHCM)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means33.7   g/dL 33.3   g/dL
Median of the strain means33.8   g/dL 33.4   g/dL
SD of the strain means± 1.27 ± 1.35
Coefficient of variation (CV)0.0376 0.0406
Min–max range of strain means31.4   –   37.2   g/dL 31.0   –   36.6   g/dL
Mean sample size per strain7.7   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 13.2781 13.2781 16.9484 < 0.0001
strain 27 694.0439 25.7053 32.8107 < 0.0001
sex:strain 27 43.9058 1.6261 2.0756 0.0015
Residuals 393 307.8932 0.7834


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
AXB10/PgnJ f 34.1 0.355   7 0.134 0.0104 33.6, 34.7 0.32
AXB10/PgnJ m 33.0 0.396   8 0.14 0.012 32.1, 33.3 -0.26
AXB12/PgnJ f 34.9 1.51   10 0.478 0.0433 33.4, 37.2 0.95
AXB12/PgnJ m 34.3 1.24   8 0.438 0.0361 33.4, 37.2 0.7
AXB13/PgnJ f 35.0 0.345   8 0.122 0.00986 34.4, 35.5 1.03
AXB13/PgnJ m 34.5 0.689   8 0.243 0.02 33.5, 35.6 0.85
AXB15/PgnJ f 32.8 0.51   8 0.18 0.0155 32.4, 33.9 -0.71
AXB15/PgnJ m 32.3 0.487   8 0.172 0.0151 31.7, 33.1 -0.77
AXB19a/PgnJ f 33.9 1.66   8 0.588 0.0491 32.4, 37.9 0.16
AXB19a/PgnJ m 33.4 0.769   8 0.272 0.023 32.4, 34.6 0.04
AXB19b/PgnJ f 34.7 1.23   7 0.463 0.0353 32.5, 36.2 0.79
AXB19b/PgnJ m 34.1 0.754   8 0.267 0.0221 32.9, 35.3 0.56
AXB19/PgnJ f 34.2 0.989   8 0.35 0.0289 33.1, 35.5 0.39
AXB19/PgnJ m 33.6 0.524   8 0.185 0.0156 32.7, 34.1 0.19
AXB1/PgnJ f 34.9 1.15   5 0.513 0.0329 33.6, 36.0 0.95
AXB1/PgnJ m 33.1 0.648   8 0.229 0.0195 32.3, 34.2 -0.18
AXB23/PgnJ f 34.9 0.62   5 0.277 0.0178 34.5, 36.0 0.95
AXB23/PgnJ m 35.8 1.16   7 0.438 0.0324 33.3, 36.7 1.81
AXB24/PgnJ f 33.4 0.918   8 0.325 0.0275 32.5, 35.2 -0.24
AXB24/PgnJ m 32.4 1.28   8 0.453 0.0395 31.0, 35.3 -0.7
AXB2/PgnJ f 37.2 0.965   8 0.341 0.0259 35.5, 38.0 2.76
AXB2/PgnJ m 36.6 1.29   8 0.455 0.0352 34.1, 37.5 2.4
AXB4/PgnJ f 33.1 0.758   6 0.31 0.0229 32.5, 34.5 -0.47
AXB4/PgnJ m 34.3 1.58   9 0.527 0.046 32.8, 37.0 0.7
AXB5/PgnJ f 34.7 0.34   7 0.129 0.0098 34.1, 35.1 0.79
AXB5/PgnJ m 34.9 0.682   7 0.258 0.0195 33.9, 35.9 1.15
AXB6/PgnJ f 34.6 0.976   7 0.369 0.0282 33.6, 36.1 0.71
AXB6/PgnJ m 34.4 0.668   6 0.273 0.0194 33.9, 35.7 0.78
AXB8/PgnJ f 33.1 1.14   7 0.432 0.0345 32.4, 35.6 -0.47
AXB8/PgnJ m 33.5 1.22   8 0.432 0.0365 32.1, 35.8 0.11
BXA11/PgnJ f 32.3 1.04   8 0.367 0.0322 30.6, 33.9 -1.1
BXA11/PgnJ m 32.7 1.06   8 0.376 0.0325 30.5, 33.7 -0.48
BXA12/PgnJ f 31.4 0.385   8 0.136 0.0123 30.7, 31.9 -1.81
BXA12/PgnJ m 31.7 0.539   8 0.191 0.017 31.0, 32.6 -1.22
BXA13/PgnJ f 34.0 0.903   8 0.319 0.0266 33.0, 35.6 0.24
BXA13/PgnJ m 33.4 0.297   8 0.105 0.00891 32.9, 33.9 0.04
BXA14/PgnJ f 33.1 0.624   8 0.221 0.0189 32.2, 34.0 -0.47
BXA14/PgnJ m 32.4 0.811   8 0.287 0.025 31.4, 33.6 -0.7
BXA16/PgnJ f 33.7 1.07   8 0.377 0.0316 32.5, 35.4 0.0
BXA16/PgnJ m 33.6 0.943   8 0.333 0.0281 32.1, 34.5 0.19
BXA1/PgnJ f 32.9 1.18   8 0.416 0.0357 31.6, 34.4 -0.63
BXA1/PgnJ m 31.0 0.344   6 0.141 0.0111 30.7, 31.6 -1.73
BXA24/PgnJ f 32.3 0.594   8 0.21 0.0184 31.6, 33.3 -1.1
BXA24/PgnJ m 31.9 0.586   8 0.207 0.0183 31.2, 32.7 -1.07
BXA25/PgnJ f 31.4 0.551   8 0.195 0.0176 30.4, 32.1 -1.81
BXA25/PgnJ m 31.3 0.449   8 0.159 0.0143 30.7, 32.1 -1.51
BXA26/PgnJ f 34.3 1.29   9 0.428 0.0375 33.4, 37.6 0.47
BXA26/PgnJ m 34.5 1.58   7 0.598 0.0459 33.0, 37.6 0.85
BXA2/PgnJ f 32.6 0.411   8 0.145 0.0126 32.0, 33.0 -0.87
BXA2/PgnJ m 31.9 0.545   10 0.172 0.0171 30.9, 32.7 -1.07
BXA4/PgnJ f 32.9 0.573   8 0.203 0.0174 32.2, 33.6 -0.63
BXA4/PgnJ m 32.4 0.547   8 0.193 0.0169 31.5, 33.1 -0.7
BXA7/PgnJ f 34.7 0.723   8 0.256 0.0209 33.6, 35.4 0.79
BXA7/PgnJ m 34.6 0.404   8 0.143 0.0117 33.8, 35.1 0.93
BXA8/PgnJ f 32.5 0.665   16 0.166 0.0205 31.4, 33.7 -0.95
BXA8/PgnJ m 32.1 0.46   15 0.119 0.0143 31.5, 33.3 -0.92


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ f 34.0714 0.3345 34.7292 33.4137
AXB10/PgnJ m 33.0375 0.3129 33.6527 32.4223
AXB12/PgnJ f 34.89 0.2799 35.4403 34.3397
AXB12/PgnJ m 34.3375 0.3129 34.9527 33.7223
AXB13/PgnJ f 35.025 0.3129 35.6402 34.4098
AXB13/PgnJ m 34.5 0.3129 35.1152 33.8848
AXB15/PgnJ f 32.8375 0.3129 33.4527 32.2223
AXB15/PgnJ m 32.2625 0.3129 32.8777 31.6473
AXB19a/PgnJ f 33.9125 0.3129 34.5277 33.2973
AXB19a/PgnJ m 33.4375 0.3129 34.0527 32.8223
AXB19b/PgnJ f 34.7429 0.3345 35.4006 34.0851
AXB19b/PgnJ m 34.1 0.3129 34.7152 33.4848
AXB19/PgnJ f 34.2125 0.3129 34.8277 33.5973
AXB19/PgnJ m 33.5625 0.3129 34.1777 32.9473
AXB1/PgnJ f 34.94 0.3958 35.7182 34.1618
AXB1/PgnJ m 33.125 0.3129 33.7402 32.5098
AXB23/PgnJ f 34.9 0.3958 35.6782 34.1218
AXB23/PgnJ m 35.8143 0.3345 36.472 35.1566
AXB24/PgnJ f 33.35 0.3129 33.9652 32.7348
AXB24/PgnJ m 32.4 0.3129 33.0152 31.7848
AXB2/PgnJ f 37.225 0.3129 37.8402 36.6098
AXB2/PgnJ m 36.575 0.3129 37.1902 35.9598
AXB4/PgnJ f 33.15 0.3614 33.8604 32.4396
AXB4/PgnJ m 34.3444 0.295 34.9245 33.7644
AXB5/PgnJ f 34.7286 0.3345 35.3863 34.0708
AXB5/PgnJ m 34.9143 0.3345 35.572 34.2566
AXB6/PgnJ f 34.6286 0.3345 35.2863 33.9708
AXB6/PgnJ m 34.4333 0.3614 35.1438 33.7229
AXB8/PgnJ f 33.1 0.3345 33.7577 32.4423
AXB8/PgnJ m 33.5 0.3129 34.1152 32.8848
BXA11/PgnJ f 32.2625 0.3129 32.8777 31.6473
BXA11/PgnJ m 32.675 0.3129 33.2902 32.0598
BXA12/PgnJ f 31.3625 0.3129 31.9777 30.7473
BXA12/PgnJ m 31.675 0.3129 32.2902 31.0598
BXA13/PgnJ f 34.0125 0.3129 34.6277 33.3973
BXA13/PgnJ m 33.3625 0.3129 33.9777 32.7473
BXA14/PgnJ f 33.0875 0.3129 33.7027 32.4723
BXA14/PgnJ m 32.4 0.3129 33.0152 31.7848
BXA16/PgnJ f 33.6875 0.3129 34.3027 33.0723
BXA16/PgnJ m 33.5625 0.3129 34.1777 32.9473
BXA1/PgnJ f 32.9375 0.3129 33.5527 32.3223
BXA1/PgnJ m 31.0333 0.3614 31.7438 30.3229
BXA24/PgnJ f 32.3125 0.3129 32.9277 31.6973
BXA24/PgnJ m 31.95 0.3129 32.5652 31.3348
BXA25/PgnJ f 31.3875 0.3129 32.0027 30.7723
BXA25/PgnJ m 31.3125 0.3129 31.9277 30.6973
BXA26/PgnJ f 34.2778 0.295 34.8578 33.6977
BXA26/PgnJ m 34.4714 0.3345 35.1292 33.8137
BXA2/PgnJ f 32.65 0.3129 33.2652 32.0348
BXA2/PgnJ m 31.88 0.2799 32.4303 31.3297
BXA4/PgnJ f 32.9 0.3129 33.5152 32.2848
BXA4/PgnJ m 32.375 0.3129 32.9902 31.7598
BXA7/PgnJ f 34.6625 0.3129 35.2777 34.0473
BXA7/PgnJ m 34.6 0.3129 35.2152 33.9848
BXA8/PgnJ f 32.5063 0.2213 32.9413 32.0712
BXA8/PgnJ m 32.14 0.2285 32.5893 31.6907


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ both 33.5545 0.229 34.0048 33.1042
AXB12/PgnJ both 34.6137 0.2099 35.0265 34.201
AXB13/PgnJ both 34.7625 0.2213 35.1975 34.3275
AXB15/PgnJ both 32.55 0.2213 32.985 32.115
AXB19a/PgnJ both 33.675 0.2213 34.11 33.24
AXB19b/PgnJ both 34.4214 0.229 34.8717 33.9711
AXB19/PgnJ both 33.8875 0.2213 34.3225 33.4525
AXB1/PgnJ both 34.0325 0.2523 34.5285 33.5365
AXB23/PgnJ both 35.3571 0.2591 35.8666 34.8477
AXB24/PgnJ both 32.875 0.2213 33.31 32.44
AXB2/PgnJ both 36.9 0.2213 37.335 36.465
AXB4/PgnJ both 33.7472 0.2333 34.2058 33.2886
AXB5/PgnJ both 34.8214 0.2366 35.2865 34.3563
AXB6/PgnJ both 34.531 0.2462 35.015 34.0469
AXB8/PgnJ both 33.3 0.229 33.7503 32.8497
BXA11/PgnJ both 32.4688 0.2213 32.9038 32.0337
BXA12/PgnJ both 31.5187 0.2213 31.9538 31.0837
BXA13/PgnJ both 33.6875 0.2213 34.1225 33.2525
BXA14/PgnJ both 32.7437 0.2213 33.1788 32.3087
BXA16/PgnJ both 33.625 0.2213 34.06 33.19
BXA1/PgnJ both 31.9854 0.239 32.4553 31.5155
BXA24/PgnJ both 32.1312 0.2213 32.5663 31.6962
BXA25/PgnJ both 31.35 0.2213 31.785 30.915
BXA26/PgnJ both 34.3746 0.223 34.8131 33.9361
BXA2/PgnJ both 32.265 0.2099 32.6777 31.8523
BXA4/PgnJ both 32.6375 0.2213 33.0725 32.2025
BXA7/PgnJ both 34.6312 0.2213 35.0663 34.1962
BXA8/PgnJ both 32.3231 0.1591 32.6358 32.0104




  GWAS USING LINEAR MIXED MODELS