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Project measure / variable:   Lesage1   cDC

ID, description, units MPD:63524   cDC   percentage of splenic leukocytes that are conventional dendritic cells   [%]  
Data set, strains Lesage1   CC w/par   74 strains     sex: both     age: 5-8wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Lesage1 - percentage of splenic leukocytes that are conventional dendritic cells



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested46 strains63 strains
Mean of the strain means1.8345   % 1.9192   %
Median of the strain means1.7208   % 1.79   %
SD of the strain means± 0.6703 ± 0.72358
Coefficient of variation (CV)0.3654 0.377
Min–max range of strain means0.74   –   3.6733   % 0.7432   –   4.39   %
Mean sample size per strain2.3   mice 2.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0442 0.0442 0.272 0.6052
strain 11 27.2755 2.4796 15.2488 < 0.0001
sex:strain 11 1.0865 0.0988 0.6075 0.81
Residuals 36 5.8539 0.1626


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.05 0.33941   2   0.24 0.1656 1.81, 2.29 0.32
129S1/SvImJ m 1.73 0.18385   2   0.13 0.1063 1.6, 1.86 -0.26
A/J f 1.0255 0.44477   2   0.3145 0.4337 0.711, 1.34 -1.21
A/J m 1.225 0.06364   2   0.045 0.052 1.18, 1.27 -0.96
C57BL/6J f 2.1075 1.049   4 0.52451 0.4978 1.45, 3.67 0.41
C57BL/6J m 2.14 0.0   1   0.0 0.0 2.14, 2.14 0.31
CAST/EiJ f 1.925 0.72832   2   0.515 0.3783 1.41, 2.44 0.13
CAST/EiJ m 2.105 0.43134   2   0.305 0.2049 1.8, 2.41 0.26
CC008/Geni m 1.29 0.09899   2   0.07 0.0767 1.22, 1.36 -0.87
CC010/Geni f 1.535 0.47376   2   0.335 0.3086 1.2, 1.87 -0.45
CC010/Geni m 2.12 0.0   1   0.0 0.0 2.12, 2.12 0.28
CC012/Geni f 0.89767 0.2475   3 0.14289 0.2757 0.631, 1.12 -1.4
CC012/Geni m 0.7432 0.08334   5 0.03727 0.1121 0.618, 0.827 -1.63
CC013/Geni m 1.175 0.185   3 0.10681 0.1574 0.975, 1.34 -1.03
CC016/Geni m 1.084 0.14549   3 0.084 0.1342 0.952, 1.24 -1.15
CC020/Geni f 1.46 0.0   1   0.0 0.0 1.46, 1.46 -0.56
CC020/Geni m 1.415 0.03536   2   0.025 0.025 1.39, 1.44 -0.7
CC023/Geni m 2.3167 0.11372   3 0.06566 0.0491 2.19, 2.41 0.55
CC024/Geni f 1.48 0.33941   2   0.24 0.2293 1.24, 1.72 -0.53
CC024/Geni m 2.53 0.0   1   0.0 0.0 2.53, 2.53 0.84
CC025/Geni f 1.45 0.16371   3 0.09452 0.1129 1.27, 1.59 -0.57
CC026/Geni m 1.3933 0.04509   3 0.02603 0.0324 1.35, 1.44 -0.73
CC027/Geni f 1.56 0.0   1   0.0 0.0 1.56, 1.56 -0.41
CC027/Geni m 1.35 0.05657   2   0.04 0.0419 1.31, 1.39 -0.79
CC030/Geni f 1.195 0.00707107   2   0.005 0.0059 1.19, 1.2 -0.95
CC031/Geni f 1.91 0.0   1   0.0 0.0 1.91, 1.91 0.11
CC031/Geni m 1.655 0.14849   2   0.105 0.0897 1.55, 1.76 -0.37
CC032/Geni m 2.5733 0.15503   3 0.0895 0.0602 2.46, 2.75 0.9
CC033/Geni f 1.7067 0.1159   3 0.06692 0.0679 1.6, 1.83 -0.19
CC038/Geni f 1.215 0.17678   2   0.125 0.1455 1.09, 1.34 -0.92
CC038/Geni m 1.5 0.0   1   0.0 0.0 1.5, 1.5 -0.58
CC042/Geni m 2.15 0.15875   3 0.09165 0.0738 2.03, 2.33 0.32
CC043/Geni m 1.6767 0.18009   3 0.10398 0.1074 1.47, 1.8 -0.34
CC056/Geni f 2.4 0.0   1   0.0 0.0 2.4, 2.4 0.84
CC056/Geni m 2.115 0.10607   2   0.075 0.0501 2.04, 2.19 0.27
CC061/Geni m 2.2733 0.1701   3 0.09821 0.0748 2.08, 2.4 0.49
CIV2_FE f 3.6733 0.77022   3 0.44468 0.2097 2.96, 4.49 2.74
DET3_GA m 1.4433 0.13013   3 0.07513 0.0902 1.31, 1.57 -0.66
DONNELL_HA f 2.91 0.82024   2   0.58 0.2819 2.33, 3.49 1.6
DONNELL_HA m 3.3 0.86816   3 0.50123 0.2631 2.34, 4.03 1.91
FIV_AC m 1.7475 0.08421   4 0.04211 0.0482 1.65, 1.85 -0.24
FUF_HE f 2.47 0.34117   3 0.19698 0.1381 2.09, 2.75 0.95
GALASUPREME_CE m 2.0 0.10536   3 0.06083 0.0527 1.9, 2.11 0.11
GIT_GC f 1.06 0.0   1   0.0 0.0 1.06, 1.06 -1.16
GIT_GC m 1.355 0.0495   2   0.035 0.0365 1.32, 1.39 -0.78
HAX2_EF f 1.95 0.16523   3 0.09539 0.0847 1.76, 2.06 0.17
HAZ_FE f 2.38 0.0   1   0.0 0.0 2.38, 2.38 0.81
HAZ_FE m 2.34 0.08485   2   0.06 0.0363 2.28, 2.4 0.58
HIP_GA f 1.48 0.0   1   0.0 0.0 1.48, 1.48 -0.53
HIP_GA m 2.14 0.07071   2   0.05 0.033 2.09, 2.19 0.31
HOE_GC f 1.13 0.0   1   0.0 0.0 1.13, 1.13 -1.05
HOE_GC m 1.47 0.2687   2   0.19 0.1828 1.28, 1.66 -0.62
JUD_EF m 3.2325 0.91602   4 0.45801 0.2834 2.31, 4.26 1.81
KAV_AF f 3.11 0.04243   2   0.03 0.0136 3.08, 3.14 1.9
KAV_AF m 3.51 0.0   1   0.0 0.0 3.51, 3.51 2.2
LAM_DC f 0.931 0.0   1   0.0 0.0 0.931, 0.931 -1.35
LAM_DC m 0.9795 0.02192   2   0.0155 0.0224 0.964, 0.995 -1.3
LAT_HD f 1.768 0.52827   5 0.23625 0.2988 0.98, 2.35 -0.1
LAT_HD m 2.325 0.06364   2   0.045 0.0274 2.28, 2.37 0.56
LAX_FC f 0.74 0.0   1   0.0 0.0 0.74, 0.74 -1.63
LAX_FC m 1.16 0.0   1   0.0 0.0 1.16, 1.16 -1.05
LEL_FH m 4.39 0.07071   2   0.05 0.0161 4.34, 4.44 3.41
LIP_BG f 2.805 0.42415   4 0.21207 0.1512 2.27, 3.17 1.45
LIP_BG m 3.33 0.0   1   0.0 0.0 3.33, 3.33 1.95
LIV_DA f 1.99 0.0   1   0.0 0.0 1.99, 1.99 0.23
LIV_DA m 2.095 0.12021   2   0.085 0.0574 2.01, 2.18 0.24
LOD_AE f 1.8833 0.24583   3 0.14193 0.1305 1.6, 2.04 0.07
LOM_BG m 1.9233 0.32716   3 0.18889 0.1701 1.62, 2.27 0.01
LOT_FC f 1.6467 0.13471   6 0.05499 0.0818 1.51, 1.84 -0.28
LUF_AD m 1.958 0.2909   5 0.13009 0.1486 1.56, 2.31 0.05
LUG_EH m 0.77967 0.07353   3 0.04245 0.0943 0.729, 0.864 -1.57
LUV_DG m 1.6175 0.17308   4 0.08654 0.107 1.39, 1.81 -0.42
LUZ_FH f 1.8 0.32031   4 0.16016 0.178 1.4, 2.18 -0.05
LUZ_FH m 1.71 0.0   1   0.0 0.0 1.71, 1.71 -0.29
MERCURI_HF m 0.93233 0.02743   3 0.01584 0.0294 0.916, 0.964 -1.36
NOD/ShiLtJ f 2.165 0.09192   2   0.065 0.0425 2.1, 2.23 0.49
NOD/ShiLtJ m 2.35 0.25456   2   0.18 0.1083 2.17, 2.53 0.6
NZO/HlLtJ f 1.0805 0.22557   2   0.1595 0.2088 0.921, 1.24 -1.12
NZO/HlLtJ m 1.124 0.26304   2   0.186 0.234 0.938, 1.31 -1.1
PAT_CD m 0.99667 0.09972   3 0.05757 0.1001 0.901, 1.1 -1.28
PEF_EC f 1.5233 0.17039   3 0.09838 0.1119 1.36, 1.7 -0.46
PEF_EC m 1.71 0.21071   3 0.12166 0.1232 1.51, 1.93 -0.29
POH_DC f 1.3833 0.08021   3 0.04631 0.058 1.3, 1.46 -0.67
PWK/PhJ f 1.69 0.16971   2   0.12 0.1004 1.57, 1.81 -0.22
PWK/PhJ m 1.99 0.56569   2   0.4 0.2843 1.59, 2.39 0.1
SEH_AH f 3.29 0.0   1   0.0 0.0 3.29, 3.29 2.17
SEH_AH m 3.1175 0.18246   4 0.09123 0.0585 2.91, 3.34 1.66
STUCKY_HF f 2.22 0.1044   3 0.06028 0.047 2.1, 2.29 0.58
STUCKY_HF m 2.51 0.0   1   0.0 0.0 2.51, 2.51 0.82
VIT_ED f 1.6833 0.14224   3 0.08212 0.0845 1.52, 1.78 -0.23
VUX2_HF m 2.6 0.21633   3 0.1249 0.0832 2.42, 2.84 0.94
WAD f 1.0973 0.18767   3 0.10835 0.171 0.892, 1.26 -1.1
WSB/EiJ f 1.735 0.5869   2   0.415 0.3383 1.32, 2.15 -0.15
WSB/EiJ m 1.31 0.31113   2   0.22 0.2375 1.09, 1.53 -0.84
XAD8_BG f 1.95 0.0   1   0.0 0.0 1.95, 1.95 0.17
XAD8_BG m 1.9933 0.1106   3 0.06386 0.0555 1.89, 2.11 0.1
XAH3_GH m 1.9 0.14933   3 0.08622 0.0786 1.79, 2.07 -0.03
XAS4_AF m 1.4 0.07211   3 0.04163 0.0515 1.34, 1.48 -0.72
XAV_AH m 1.5733 0.18877   3 0.10899 0.12 1.41, 1.78 -0.48
XAW2_CD m 1.605 0.19092   2   0.135 0.119 1.47, 1.74 -0.43
XEB2_AG f 2.7167 0.07767   3 0.04485 0.0286 2.63, 2.78 1.32
XEB2_AG m 2.66 0.31097   3 0.17954 0.1169 2.39, 3.0 1.02
XEB_AF f 2.79 0.19799   2   0.14 0.071 2.65, 2.93 1.43
XEB_AF m 2.48 0.0   1   0.0 0.0 2.48, 2.48 0.77
XEQ_EH m 1.6567 0.29006   3 0.16746 0.1751 1.37, 1.95 -0.36
XXEN2_DC m 1.1033 0.09238   3 0.05333 0.0837 1.05, 1.21 -1.13
XXEN3_DC f 1.42 0.0   1   0.0 0.0 1.42, 1.42 -0.62
XXEN3_DC m 1.79 0.0   1   0.0 0.0 1.79, 1.79 -0.18
YOX_DE m 2.7433 0.18148   3 0.10477 0.0662 2.61, 2.95 1.14


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.05 0.2851 2.6283 1.4717
129S1/SvImJ m 1.73 0.2851 2.3083 1.1517
A/J f 1.0255 0.2851 1.6038 0.4472
A/J m 1.225 0.2851 1.8033 0.6467
CAST/EiJ f 1.925 0.2851 2.5033 1.3467
CAST/EiJ m 2.105 0.2851 2.6833 1.5267
CC012/Geni f 0.8977 0.2328 1.3698 0.4255
CC012/Geni m 0.7432 0.1803 1.1089 0.3775
DONNELL_HA f 2.91 0.2851 3.4883 2.3317
DONNELL_HA m 3.3 0.2328 3.7722 2.8278
LAT_HD f 1.768 0.1803 2.1337 1.4023
LAT_HD m 2.325 0.2851 2.9033 1.7467
NOD/ShiLtJ f 2.165 0.2851 2.7433 1.5867
NOD/ShiLtJ m 2.35 0.2851 2.9283 1.7717
NZO/HlLtJ f 1.0805 0.2851 1.6588 0.5022
NZO/HlLtJ m 1.124 0.2851 1.7023 0.5457
PEF_EC f 1.5233 0.2328 1.9955 1.0512
PEF_EC m 1.71 0.2328 2.1822 1.2378
PWK/PhJ f 1.69 0.2851 2.2683 1.1117
PWK/PhJ m 1.99 0.2851 2.5683 1.4117
WSB/EiJ f 1.735 0.2851 2.3133 1.1567
WSB/EiJ m 1.31 0.2851 1.8883 0.7317
XEB2_AG f 2.7167 0.2328 3.1888 2.2445
XEB2_AG m 2.66 0.2328 3.1322 2.1878


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.89 0.2016 2.2989 1.4811
A/J both 1.1253 0.2016 1.5342 0.7163
CAST/EiJ both 2.015 0.2016 2.4239 1.6061
CC012/Geni both 0.8204 0.1472 1.1191 0.5218
DONNELL_HA both 3.105 0.1841 3.4783 2.7317
LAT_HD both 2.0465 0.1687 2.3886 1.7044
NOD/ShiLtJ both 2.2575 0.2016 2.6664 1.8486
NZO/HlLtJ both 1.1023 0.2016 1.5112 0.6933
PEF_EC both 1.6167 0.1646 1.9505 1.2828
PWK/PhJ both 1.84 0.2016 2.2489 1.4311
WSB/EiJ both 1.5225 0.2016 1.9314 1.1136
XEB2_AG both 2.6883 0.1646 3.0222 2.3545




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA