Project measure / variable:   Bolivar1   LR_time_pct_d3

ID, description, units MPD:63460   LR_time_pct_d3   percentage of time spent in left-rear of arena, 5 min test in dark   [%]  day 3  
Data set, strains Bolivar1   inbred   10 strains     sex: both     age:
Procedure open field test
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Bolivar1 - percentage of time spent in left-rear of arena, 5 min test in dark day 3



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means11.261   % 10.091   %
Median of the strain means11.495   % 9.903   %
SD of the strain means± 3.2517 ± 2.9789
Coefficient of variation (CV)0.2888 0.2952
Min–max range of strain means6.5306   –   15.831   % 5.4639   –   14.139   %
Mean sample size per strain12.0   mice 12.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 82.056 82.056 0.9023 0.3432
strain 9 1428.8249 158.7583 1.7458 0.0801
sex:strain 9 671.4657 74.6073 0.8204 0.5979
Residuals 220 20006.2976 90.9377


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 11.147 8.0609   12 2.327 0.7231 -0.03
129S1/SvImJ m 6.7333 9.9386   12 2.869 1.476 -1.13
A/J f 15.05 16.266   12 4.6955 1.0808 1.17
A/J m 14.036 18.82   12 5.4328 1.3408 0.9, 69.9 1.32
B6129SF1/J f 6.5306 7.2097   12 2.0813 1.104 0.733333333, 27.43333333 -1.45
B6129SF1/J m 11.411 6.41   12 1.8504 0.5617 3.566666667, 23.13333333 0.44
B6C3F1/J f 14.139 10.178   12 2.9381 0.7199 3.533333333, 40.36666667 0.89
B6C3F1/J m 14.139 12.794   12 3.6932 0.9049 4.533333333, 51.33333333 1.36
BALB/cByJ f 6.9833 3.9098   12 1.1287 0.5599 -1.32
BALB/cByJ m 8.4444 4.4997   12 1.299 0.5329 2.033333333, 15.53333333 -0.55
C3H/HeJ f 8.2111 5.0943   12 1.4706 0.6204 0.966666667, 20.76666667 -0.94
C3H/HeJ m 11.181 5.1822   12 1.496 0.4635 3.8, 19.93333333 0.37
C57BL/6J f 15.831 10.201   12 2.9447 0.6444 3.533333333, 35.93333333 1.41
C57BL/6J m 12.336 10.637   12 3.0706 0.8623 4.2, 39.4 0.75
CBA/J f 11.844 11.441   12 3.3027 0.9659 0.18
CBA/J m 5.4639 2.957   12 0.85362 0.5412 1.9, 10.16666667 -1.55
DBA/2J f 10.644 4.5492   12 1.3132 0.4274 6.033333333, 20.13333333 -0.19
DBA/2J m 8.5417 7.4526   12 2.1514 0.8725 -0.52
FVB/NJ f 12.225 12.139   12 3.5042 0.9929 1.533333333, 43.46666667 0.3
FVB/NJ m 8.625 2.6745   12 0.77206 0.3101 5.233333333, 12.86666667 -0.49


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 11.1472 2.7528 16.5725 5.7219
129S1/SvImJ m 6.7333 2.7528 12.1587 1.308
A/J f 15.05 2.7528 20.4753 9.6247
A/J m 14.0361 2.7528 19.4614 8.6108
B6129SF1/J f 6.5306 2.7528 11.9559 1.1052
B6129SF1/J m 11.4111 2.7528 16.8364 5.9858
B6C3F1/J f 14.1389 2.7528 19.5642 8.7136
B6C3F1/J m 14.1389 2.7528 19.5642 8.7136
BALB/cByJ f 6.9833 2.7528 12.4087 1.558
BALB/cByJ m 8.4444 2.7528 13.8698 3.0191
C3H/HeJ f 8.2111 2.7528 13.6364 2.7858
C3H/HeJ m 11.1806 2.7528 16.6059 5.7552
C57BL/6J f 15.8306 2.7528 21.2559 10.4052
C57BL/6J m 12.3361 2.7528 17.7614 6.9108
CBA/J f 11.8444 2.7528 17.2698 6.4191
CBA/J m 5.4639 2.7528 10.8892 0.0386
DBA/2J f 10.6444 2.7528 16.0698 5.2191
DBA/2J m 8.5417 2.7528 13.967 3.1163
FVB/NJ f 12.225 2.7528 17.6503 6.7997
FVB/NJ m 8.625 2.7528 14.0503 3.1997


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 8.9403 1.9466 12.7766 5.104
A/J both 14.5431 1.9466 18.3793 10.7068
B6129SF1/J both 8.9708 1.9466 12.8071 5.1346
B6C3F1/J both 14.1389 1.9466 17.9752 10.3026
BALB/cByJ both 7.7139 1.9466 11.5502 3.8776
C3H/HeJ both 9.6958 1.9466 13.5321 5.8596
C57BL/6J both 14.0833 1.9466 17.9196 10.2471
CBA/J both 8.6542 1.9466 12.4904 4.8179
DBA/2J both 9.5931 1.9466 13.4293 5.7568
FVB/NJ both 10.425 1.9466 14.2613 6.5887




  GWAS USING LINEAR MIXED MODELS