Project measure / variable:   Powell1   bacterial_load_wk5

ID, description, units MPD:62805   bacterial_load_wk5   oral cavity bacterial colony count (CFU/swab) post inoculation (x 103)   [n]  wk 5  
Neisseria musculi study
Data set, strains Powell1   inbred   8 strains     sex: both     age: 8-16wks
Procedure in vitro assay
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Powell1 - oral cavity bacterial colony count (CFU/swab) post inoculation (x 103) wk 5



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means4.8779   n 3.5669   n
Median of the strain means0.0   n 0.0   n
SD of the strain means± 10.08 ± 6.7553
Coefficient of variation (CV)2.0664 1.8939
Min–max range of strain means0.0   –   28.464   n 0.0   –   17.234   n
Mean sample size per strain14.4   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1350.1057 1350.1057 0.2016 0.6542
strain 6 21103.7742 3517.2957 0.5251 0.7883
sex:strain 6 440.7141 73.4523 0.011 1.0
Residuals 123 823850.3995 6697.9707


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.0 0.0   2   0.0 None -0.48
129S1/SvImJ m 0.0 0.0   2   0.0 None -0.53
A/J f 9.4989 15.828   9 5.2758 1.6663 0.06, 49.0 0.46
A/J m 11.144 11.162   5 4.9918 1.0016 0.72, 30.2 1.12
C57BL/6J f 1.06 1.7841   39 0.28568 1.6831 -0.38
C57BL/6J m 0.1575 0.18733   4 0.09366 1.1894 -0.5
CAST/EiJ f 28.464 124.3   54 16.915 4.3668 2.34
CAST/EiJ m 17.234 24.456   5 10.937 1.4191 0.26, 54.0 2.02
NOD/ShiLtJ f 0.0 0.0   1   0.0 None -0.48
NOD/ShiLtJ m 0.0 0.0   1   0.0 None -0.53
NZO/HlLtJ f 0.0 0.0   2   0.0 None -0.48
NZO/HlLtJ m 0.0 0.0   2   0.0 None -0.53
PWK/PhJ f 0.0 0.0   4 0.0 None -0.48
PWK/PhJ m 0.0 0.0   3 0.0 None -0.53
WSB/EiJ f 0.0 0.0   4 0.0 None -0.48
WSB/EiJ m 0.0 0.0   2   0.0 None -0.53


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.0 57.8704 114.5509 -114.5509
129S1/SvImJ m 0.0 57.8704 114.5509 -114.5509
A/J f 9.4989 27.2804 63.4987 -44.5009
A/J m 11.144 36.6005 83.5924 -61.3044
C57BL/6J f 1.06 13.1051 27.0007 -24.8807
C57BL/6J m 0.1575 40.9206 81.1573 -80.8423
CAST/EiJ f 28.4641 11.1372 50.5094 6.4187
CAST/EiJ m 17.234 36.6005 89.6824 -55.2144
NZO/HlLtJ f 0.0 57.8704 114.5509 -114.5509
NZO/HlLtJ m 0.0 57.8704 114.5509 -114.5509
PWK/PhJ f 0.0 40.9206 80.9998 -80.9998
PWK/PhJ m 0.0 47.251 93.5305 -93.5305
WSB/EiJ f 0.0 40.9206 80.9998 -80.9998
WSB/EiJ m 0.0 57.8704 114.5509 -114.5509


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.0 40.9206 80.9998 -80.9998
A/J both 10.3214 22.8244 55.5009 -34.8581
C57BL/6J both 0.6088 21.4839 43.1349 -41.9174
CAST/EiJ both 22.849 19.1287 60.7132 -15.0151
NZO/HlLtJ both 0.0 40.9206 80.9998 -80.9998
PWK/PhJ both 0.0 31.2536 61.8646 -61.8646
WSB/EiJ both 0.0 35.4382 70.1478 -70.1478




  GWAS USING LINEAR MIXED MODELS