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Project measure / variable:   Peters1   PTT

ID, description, units MPD:6227   PTT   partial thromboplastin time (PTT)   [s]  
Data set, strains Peters1   inbred w/CC7   43 strains     sex: both     age: 10wks
Procedure coagulation test
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  STRAIN COMPARISON PLOT
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Peters1 - partial thromboplastin time (PTT)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested42 strains43 strains
Mean of the strain means22.5   s 23.3   s
Median of the strain means22.1   s 23.4   s
SD of the strain means± 3.08 ± 2.79
Coefficient of variation (CV)0.136 0.120
Min–max range of strain means16.2   –   32.4   s 17.4   –   34.7   s
Mean sample size per strain10.3   mice 10.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 141.1961 141.1961 20.0128 < 0.0001
strain 41 6055.8408 147.7034 20.9351 < 0.0001
sex:strain 41 797.4825 19.4508 2.7569 < 0.0001
Residuals 773 5453.7511 7.0553


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 20.2 2.29   13 0.636 0.113 17.1, 24.8 -0.76
129S1/SvImJ m 22.9 1.17   10 0.37 0.051 21.0, 24.5 -0.16
A/J f 23.4 2.77   10 0.877 0.118 21.1, 29.7 0.28
A/J m 22.3 1.21   8 0.427 0.0541 20.8, 23.9 -0.37
AKR/J f 22.8 2.64   10 0.834 0.116 20.0, 29.6 0.09
AKR/J m 22.9 2.86   10 0.906 0.125 19.2, 28.4 -0.16
BALB/cByJ f 22.9 1.97   9 0.655 0.086 19.8, 25.3 0.12
BALB/cByJ m 23.4 2.23   12 0.644 0.0954 19.6, 26.5 0.02
BALB/cJ m 20.5 0.797   5 0.356 0.0389 19.6, 21.7 -1.02
BTBR T+ Itpr3tf/J f 21.3 3.08   11 0.929 0.144 18.2, 29.2 -0.4
BTBR T+ Itpr3tf/J m 21.8 3.55   10 1.12 0.162 18.9, 29.6 -0.55
BUB/BnJ f 22.0 2.34   13 0.648 0.106 20.3, 28.7 -0.17
BUB/BnJ m 22.8 1.78   10 0.564 0.0782 20.3, 25.6 -0.2
C3H/HeJ f 22.2 1.54   10 0.486 0.0692 21.0, 26.2 -0.11
C3H/HeJ m 24.1 2.18   11 0.657 0.0904 20.8, 27.9 0.27
C57BL/10J f 24.5 2.79   11 0.843 0.114 20.5, 29.1 0.64
C57BL/10J m 24.4 3.63   12 1.05 0.149 21.8, 34.9 0.38
C57BL/6J f 23.5 2.22   11 0.67 0.0947 21.0, 27.6 0.31
C57BL/6J m 21.7 1.07   9 0.358 0.0494 20.0, 23.5 -0.59
C57BLKS/J f 22.0 1.63   11 0.493 0.0744 20.2, 26.1 -0.17
C57BLKS/J m 21.7 1.09   14 0.291 0.0501 20.3, 24.5 -0.59
C57BR/cdJ f 22.2 1.52   10 0.48 0.0684 19.4, 25.0 -0.11
C57BR/cdJ m 23.9 3.0   9 0.999 0.125 20.6, 29.1 0.2
C57L/J f 21.9 2.06   10 0.651 0.0939 18.4, 25.8 -0.21
C57L/J m 24.5 3.53   10 1.12 0.144 20.5, 30.0 0.41
C58/J f 21.5 0.789   10 0.25 0.0368 20.6, 23.0 -0.34
C58/J m 23.5 2.44   12 0.705 0.104 21.0, 29.2 0.05
CAST/EiJ f 19.9 2.63   13 0.729 0.132 16.1, 24.8 -0.86
CAST/EiJ m 22.0 3.79   10 1.2 0.172 17.5, 28.0 -0.48
CBA/J f 23.4 2.88   10 0.912 0.123 19.2, 29.1 0.28
CBA/J m 25.1 3.57   11 1.08 0.142 21.6, 35.1 0.63
CE/J f 22.7 2.53   14 0.677 0.111 17.6, 27.0 0.05
CE/J m 23.6 3.99   10 1.26 0.169 17.1, 29.9 0.09
CZECHII/EiJ f 16.2 1.49   8 0.525 0.0915 14.1, 18.6 -2.06
CZECHII/EiJ m 19.5 4.39   10 1.39 0.225 15.2, 30.7 -1.38
DBA/1J f 21.7 2.79   9 0.93 0.128 19.3, 28.8 -0.27
DBA/1J m 22.8 2.18   10 0.688 0.0956 20.8, 26.7 -0.2
DBA/2J f 20.5 3.28   10 1.04 0.16 16.4, 26.4 -0.66
DBA/2J m 23.8 3.47   9 1.16 0.146 18.1, 28.9 0.16
FVB/NJ f 23.6 1.13   11 0.342 0.0481 21.1, 25.3 0.35
FVB/NJ m 23.7 3.28   10 1.04 0.139 20.0, 29.3 0.13
I/LnJ f 20.4 2.52   8 0.892 0.124 17.0, 23.7 -0.69
I/LnJ m 22.9 1.27   10 0.403 0.0558 21.5, 26.1 -0.16
JF1/MsJ f 17.3 1.05   12 0.304 0.0609 16.2, 19.9 -1.7
JF1/MsJ m 22.3 1.34   10 0.424 0.0601 20.8, 24.4 -0.37
KK/HlJ f 25.0 3.25   11 0.981 0.13 21.5, 33.8 0.8
KK/HlJ m 29.6 5.62   10 1.78 0.19 23.2, 40.4 2.24
LP/J f 21.0 0.651   10 0.206 0.031 20.0, 22.0 -0.5
LP/J m 23.6 3.83   12 1.11 0.162 20.0, 31.8 0.09
MA/MyJ f 24.9 3.5   11 1.06 0.141 20.6, 31.1 0.77
MA/MyJ m 25.7 1.74   9 0.579 0.0675 22.9, 29.3 0.84
MOLF/EiJ f 21.7 2.84   9 0.945 0.131 18.5, 28.3 -0.27
MOLF/EiJ m 24.7 1.56   9 0.519 0.063 22.6, 27.0 0.48
MSM/MsJ f 19.9 4.17   10 1.32 0.21 16.2, 30.8 -0.86
MSM/MsJ m 17.4 2.61   9 0.868 0.15 14.2, 21.2 -2.13
NOD/ShiLtJ f 22.4 1.62   9 0.541 0.0723 20.9, 25.8 -0.04
NOD/ShiLtJ m 22.5 1.47   10 0.466 0.0656 20.6, 25.3 -0.3
NON/ShiLtJ f 23.0 2.03   12 0.586 0.0881 21.1, 27.6 0.15
NON/ShiLtJ m 24.6 3.22   10 1.02 0.131 21.2, 31.3 0.45
NZB/BlNJ f 23.5 2.75   11 0.83 0.117 20.0, 28.7 0.31
NZB/BlNJ m 24.3 2.24   9 0.747 0.0923 21.4, 27.8 0.34
NZW/LacJ f 21.4 1.86   11 0.562 0.0869 19.9, 25.6 -0.37
NZW/LacJ m 20.5 0.994   9 0.331 0.0485 19.7, 23.0 -1.02
PERA/EiJ f 27.6 3.26   10 1.03 0.118 25.1, 33.8 1.65
PERA/EiJ m 24.6 2.77   9 0.922 0.112 21.9, 29.4 0.45
PL/J f 32.4 3.79   10 1.2 0.117 29.0, 39.5 3.21
PL/J m 34.7 5.02   9 1.67 0.145 28.8, 44.8 4.07
PWK/PhJ f 17.6 1.07   6 0.435 0.0604 16.7, 19.5 -1.6
PWK/PhJ m 19.9 1.52   12 0.439 0.0764 17.2, 21.6 -1.23
RF/J f 26.7 2.71   10 0.858 0.102 23.1, 31.5 1.35
RF/J m 23.9 1.58   8 0.559 0.0661 20.7, 25.8 0.2
RIIIS/J f 27.3 2.78   8 0.983 0.102 22.7, 30.0 1.55
RIIIS/J m 27.9 2.93   11 0.883 0.105 25.0, 32.8 1.63
SEA/GnJ f 21.4 1.06   10 0.334 0.0494 19.8, 22.9 -0.37
SEA/GnJ m 23.5 2.03   8 0.719 0.0865 22.5, 28.5 0.05
SJL/J f 20.5 2.43   11 0.733 0.118 17.9, 25.5 -0.66
SJL/J m 21.3 4.06   11 1.22 0.19 16.5, 29.0 -0.73
SM/J f 21.8 0.902   10 0.285 0.0414 20.9, 24.0 -0.24
SM/J m 21.2 0.543   9 0.181 0.0256 20.6, 22.0 -0.77
SPRET/EiJ f 19.8 1.77   10 0.561 0.0893 17.3, 23.8 -0.89
SPRET/EiJ m 20.1 1.62   10 0.513 0.0805 18.3, 23.4 -1.16
SWR/J f 30.4 4.75   11 1.43 0.156 22.2, 38.1 2.56
SWR/J m 25.9 2.04   10 0.645 0.0788 22.5, 28.9 0.91
WSB/EiJ f 22.1 2.12   10 0.669 0.0955 19.0, 26.4 -0.14
WSB/EiJ m 21.9 1.86   12 0.537 0.085 18.4, 25.4 -0.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 20.2385 0.7367 21.6846 18.7923
129S1/SvImJ m 22.91 0.84 24.5589 21.2611
A/J f 23.42 0.84 25.0689 21.7711
A/J m 22.325 0.9391 24.1685 20.4815
AKR/J f 22.75 0.84 24.3989 21.1011
AKR/J m 22.95 0.84 24.5989 21.3011
BALB/cByJ f 22.8556 0.8854 24.5936 21.1175
BALB/cByJ m 23.4 0.7668 24.9052 21.8948
BTBR T+ Itpr3tf/J f 21.3182 0.8009 22.8903 19.746
BTBR T+ Itpr3tf/J m 21.84 0.84 23.4889 20.1911
BUB/BnJ f 21.9538 0.7367 23.4 20.5077
BUB/BnJ m 22.82 0.84 24.4689 21.1711
C3H/HeJ f 22.21 0.84 23.8589 20.5611
C3H/HeJ m 24.1273 0.8009 25.6994 22.5551
C57BL/10J f 24.5273 0.8009 26.0994 22.9551
C57BL/10J m 24.4 0.7668 25.9052 22.8948
C57BL/6J f 23.4636 0.8009 25.0358 21.8915
C57BL/6J m 21.7333 0.8854 23.4714 19.9953
C57BLKS/J f 21.9545 0.8009 23.5267 20.3824
C57BLKS/J m 21.7357 0.7099 23.1293 20.3422
C57BR/cdJ f 22.18 0.84 23.8289 20.5311
C57BR/cdJ m 23.9222 0.8854 25.6603 22.1842
C57L/J f 21.93 0.84 23.5789 20.2811
C57L/J m 24.51 0.84 26.1589 22.8611
C58/J f 21.45 0.84 23.0989 19.8011
C58/J m 23.4583 0.7668 24.9635 21.9531
CAST/EiJ f 19.8923 0.7367 21.3385 18.4462
CAST/EiJ m 21.97 0.84 23.6189 20.3211
CBA/J f 23.39 0.84 25.0389 21.7411
CBA/J m 25.0727 0.8009 26.6449 23.5006
CE/J f 22.7143 0.7099 24.1078 21.3207
CE/J m 23.6 0.84 25.2489 21.9511
CZECHII/EiJ f 16.25 0.9391 18.0935 14.4065
CZECHII/EiJ m 19.52 0.84 21.1689 17.8711
DBA/1J f 21.7222 0.8854 23.4603 19.9842
DBA/1J m 22.76 0.84 24.4089 21.1111
DBA/2J f 20.54 0.84 22.1889 18.8911
DBA/2J m 23.7889 0.8854 25.527 22.0508
FVB/NJ f 23.5727 0.8009 25.1449 22.0006
FVB/NJ m 23.67 0.84 25.3189 22.0211
I/LnJ f 20.4 0.9391 22.2435 18.5565
I/LnJ m 22.85 0.84 24.4989 21.2011
JF1/MsJ f 17.2917 0.7668 18.7969 15.7865
JF1/MsJ m 22.34 0.84 23.9889 20.6911
KK/HlJ f 25.0455 0.8009 26.6176 23.4733
KK/HlJ m 29.59 0.84 31.2389 27.9411
LP/J f 21.02 0.84 22.6689 19.3711
LP/J m 23.65 0.7668 25.1552 22.1448
MA/MyJ f 24.8727 0.8009 26.4449 23.3006
MA/MyJ m 25.7 0.8854 27.4381 23.9619
MOLF/EiJ f 21.6556 0.8854 23.3936 19.9175
MOLF/EiJ m 24.6889 0.8854 26.427 22.9508
MSM/MsJ f 19.88 0.84 21.5289 18.2311
MSM/MsJ m 17.3556 0.8854 19.0936 15.6175
NOD/ShiLtJ f 22.4222 0.8854 24.1603 20.6842
NOD/ShiLtJ m 22.5 0.84 24.1489 20.8511
NON/ShiLtJ f 23.025 0.7668 24.5302 21.5198
NON/ShiLtJ m 24.58 0.84 26.2289 22.9311
NZB/BlNJ f 23.4818 0.8009 25.054 21.9097
NZB/BlNJ m 24.2778 0.8854 26.0158 22.5397
NZW/LacJ f 21.4455 0.8009 23.0176 19.8733
NZW/LacJ m 20.5 0.8854 22.2381 18.7619
PERA/EiJ f 27.56 0.84 29.2089 25.9111
PERA/EiJ m 24.6444 0.8854 26.3825 22.9064
PL/J f 32.38 0.84 34.0289 30.7311
PL/J m 34.6667 0.8854 36.4047 32.9286
PWK/PhJ f 17.6333 1.0844 19.762 15.5047
PWK/PhJ m 19.9083 0.7668 21.4135 18.4031
RF/J f 26.7 0.84 28.3489 25.0511
RF/J m 23.9 0.9391 25.7435 22.0565
RIIIS/J f 27.325 0.9391 29.1685 25.4815
RIIIS/J m 27.9091 0.8009 29.4812 26.337
SEA/GnJ f 21.41 0.84 23.0589 19.7611
SEA/GnJ m 23.5 0.9391 25.3435 21.6565
SJL/J f 20.5455 0.8009 22.1176 18.9733
SJL/J m 21.3364 0.8009 22.9085 19.7642
SM/J f 21.81 0.84 23.4589 20.1611
SM/J m 21.2333 0.8854 22.9714 19.4953
SPRET/EiJ f 19.85 0.84 21.4989 18.2011
SPRET/EiJ m 20.15 0.84 21.7989 18.5011
SWR/J f 30.3818 0.8009 31.954 28.8097
SWR/J m 25.87 0.84 27.5189 24.2211
WSB/EiJ f 22.15 0.84 23.7989 20.5011
WSB/EiJ m 21.9 0.7668 23.4052 20.3948


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 21.5742 0.5586 22.6708 20.4776
A/J both 22.8725 0.63 24.1092 21.6358
AKR/J both 22.85 0.5939 24.0159 21.6841
BALB/cByJ both 23.1278 0.5856 24.2774 21.9782
BTBR T+ Itpr3tf/J both 21.5791 0.5803 22.7182 20.44
BUB/BnJ both 22.3869 0.5586 23.4835 21.2903
C3H/HeJ both 23.1686 0.5803 24.3078 22.0295
C57BL/10J both 24.4636 0.5544 25.5519 23.3754
C57BL/6J both 22.5985 0.5969 23.7703 21.4267
C57BLKS/J both 21.8451 0.5351 22.8956 20.7947
C57BR/cdJ both 23.0511 0.6102 24.249 21.8532
C57L/J both 23.22 0.5939 24.3859 22.0541
C58/J both 22.4542 0.5687 23.5705 21.3379
CAST/EiJ both 20.9312 0.5586 22.0278 19.8346
CBA/J both 24.2314 0.5803 25.3705 23.0922
CE/J both 23.1571 0.5499 24.2366 22.0777
CZECHII/EiJ both 17.885 0.63 19.1217 16.6483
DBA/1J both 22.2411 0.6102 23.439 21.0432
DBA/2J both 22.1644 0.6102 23.3623 20.9666
FVB/NJ both 23.6214 0.5803 24.7605 22.4822
I/LnJ both 21.625 0.63 22.8617 20.3883
JF1/MsJ both 19.8158 0.5687 20.9321 18.6995
KK/HlJ both 27.3177 0.5803 28.4568 26.1786
LP/J both 22.335 0.5687 23.4513 21.2187
MA/MyJ both 25.2864 0.5969 26.4582 24.1146
MOLF/EiJ both 23.1722 0.6261 24.4012 21.9432
MSM/MsJ both 18.6178 0.6102 19.8157 17.4199
NOD/ShiLtJ both 22.4611 0.6102 23.659 21.2632
NON/ShiLtJ both 23.8025 0.5687 24.9188 22.6862
NZB/BlNJ both 23.8798 0.5969 25.0516 22.708
NZW/LacJ both 20.9727 0.5969 22.1445 19.8009
PERA/EiJ both 26.1022 0.6102 27.3001 24.9043
PL/J both 33.5233 0.6102 34.7212 32.3255
PWK/PhJ both 18.7708 0.664 20.0744 17.4673
RF/J both 25.3 0.63 26.5367 24.0633
RIIIS/J both 27.617 0.6171 28.8285 26.4056
SEA/GnJ both 22.455 0.63 23.6917 21.2183
SJL/J both 20.9409 0.5663 22.0526 19.8292
SM/J both 21.5217 0.6102 22.7195 20.3238
SPRET/EiJ both 20.0 0.5939 21.1659 18.8341
SWR/J both 28.1259 0.5803 29.265 26.9868
WSB/EiJ both 22.025 0.5687 23.1413 20.9087




  GWAS USING LINEAR MIXED MODELS