Project measure / variable:   Peters1   MCHC

ID, description, units MPD:6207   MCHC   mean RBC corpuscular hemoglobin concentration (MCHC)   [g/dL]  
Data set, strains Peters1   inbred w/CC7   43 strains     sex: both     age: 10wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters1 - mean RBC corpuscular hemoglobin concentration (MCHC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested43 strains43 strains
Mean of the strain means34.5   g/dL 34.4   g/dL
Median of the strain means34.3   g/dL 34.5   g/dL
SD of the strain means± 1.35 ± 1.11
Coefficient of variation (CV)0.0390 0.0322
Min–max range of strain means32.2   –   38.1   g/dL 31.3   –   37.0   g/dL
Mean sample size per strain11.7   mice 11.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2.8431 2.8431 1.3405 0.2473
strain 42 1099.2802 26.1733 12.3403 < 0.0001
sex:strain 42 454.2899 10.8164 5.0998 < 0.0001
Residuals 917 1944.9268 2.121


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 35.4 1.06   14 0.283 0.0299 32.8, 36.9 0.65
129S1/SvImJ m 33.8 1.83   15 0.473 0.0543 31.7, 36.8 -0.52
A/J f 32.2 2.47   10 0.782 0.0767 28.4, 35.6 -1.73
A/J m 35.6 2.12   10 0.672 0.0597 29.9, 37.1 1.1
AKR/J f 34.8 1.04   10 0.33 0.03 32.5, 35.8 0.21
AKR/J m 34.7 1.1   9 0.366 0.0317 32.9, 36.0 0.29
BALB/cByJ f 38.1 1.01   15 0.261 0.0265 36.9, 40.3 2.66
BALB/cByJ m 37.0 1.22   29 0.227 0.033 34.8, 40.0 2.37
BALB/cJ f 34.0 1.63   11 0.49 0.0478 30.5, 35.7 -0.39
BALB/cJ m 36.6 1.13   5 0.507 0.031 34.8, 37.6 2.01
BTBR T+ Itpr3tf/J f 36.4 0.911   10 0.288 0.025 34.6, 37.5 1.39
BTBR T+ Itpr3tf/J m 35.4 1.52   10 0.481 0.043 33.4, 38.7 0.92
BUB/BnJ f 35.5 0.719   14 0.192 0.0203 34.5, 36.5 0.73
BUB/BnJ m 34.3 1.89   10 0.598 0.0551 32.7, 38.2 -0.07
C3H/HeJ f 32.8 0.356   10 0.113 0.0109 32.1, 33.3 -1.28
C3H/HeJ m 34.7 0.923   10 0.292 0.0266 33.7, 37.0 0.29
C57BL/10J f 34.2 1.89   21 0.413 0.0554 30.3, 36.5 -0.24
C57BL/10J m 33.2 2.03   15 0.525 0.0613 28.8, 36.7 -1.07
C57BL/6J f 33.9 0.883   11 0.266 0.026 32.8, 35.3 -0.46
C57BL/6J m 31.3 0.859   11 0.259 0.0274 30.4, 33.6 -2.78
C57BLKS/J f 32.9 0.816   10 0.258 0.0248 31.8, 34.1 -1.21
C57BLKS/J m 34.1 2.04   10 0.646 0.0599 30.9, 36.6 -0.25
C57BR/cdJ f 35.3 1.97   10 0.622 0.0557 33.0, 39.8 0.58
C57BR/cdJ m 33.9 1.1   12 0.319 0.0326 32.2, 36.1 -0.43
C57L/J f 34.7 0.884   12 0.255 0.0255 32.8, 35.8 0.13
C57L/J m 32.6 2.51   15 0.649 0.0771 29.9, 37.8 -1.61
C58/J f 34.6 0.588   10 0.186 0.017 33.6, 35.6 0.06
C58/J m 34.2 1.29   9 0.429 0.0376 31.0, 35.3 -0.16
CAST/EiJ f 34.4 1.36   12 0.391 0.0394 32.2, 36.1 -0.09
CAST/EiJ m 35.8 0.752   11 0.227 0.021 34.4, 37.0 1.28
CBA/J f 33.4 1.33   9 0.442 0.0397 31.5, 35.6 -0.83
CBA/J m 34.9 0.759   10 0.24 0.0218 33.6, 35.8 0.47
CE/J f 33.5 0.822   13 0.228 0.0245 32.1, 34.8 -0.76
CE/J m 33.3 1.28   8 0.454 0.0386 31.7, 35.2 -0.98
CZECHII/EiJ f 34.3 1.11   11 0.335 0.0324 32.0, 35.6 -0.17
CZECHII/EiJ m 34.4 1.18   11 0.357 0.0344 31.3, 36.1 0.02
DBA/1J f 33.0 1.96   14 0.525 0.0595 31.0, 37.2 -1.13
DBA/1J m 33.7 1.37   11 0.414 0.0407 30.8, 35.1 -0.61
DBA/2J f 34.5 1.74   12 0.502 0.0504 31.0, 36.8 -0.02
DBA/2J m 34.5 1.42   10 0.45 0.0412 32.2, 36.7 0.11
FVB/NJ f 34.6 0.981   12 0.283 0.0284 33.1, 35.6 0.06
FVB/NJ m 35.3 1.73   12 0.5 0.0491 32.9, 38.6 0.83
I/LnJ f 34.3 1.2   13 0.334 0.035 32.5, 36.8 -0.17
I/LnJ m 35.0 1.75   14 0.469 0.0501 33.1, 38.7 0.56
JF1/MsJ f 35.3 1.15   12 0.331 0.0324 32.9, 37.0 0.58
JF1/MsJ m 34.9 1.68   16 0.421 0.0483 32.0, 39.2 0.47
KK/HlJ f 33.5 1.85   14 0.493 0.0551 27.6, 35.0 -0.76
KK/HlJ m 31.6 1.52   11 0.46 0.0482 29.6, 34.4 -2.51
LP/J f 33.6 1.32   15 0.34 0.0393 32.0, 37.5 -0.69
LP/J m 34.5 1.3   10 0.412 0.0377 33.1, 37.3 0.11
MA/MyJ f 34.6 1.25   12 0.36 0.036 33.2, 37.9 0.06
MA/MyJ m 35.2 1.53   13 0.425 0.0435 33.6, 38.1 0.74
MOLF/EiJ f 36.6 1.29   13 0.358 0.0353 34.9, 38.8 1.54
MOLF/EiJ m 35.5 2.0   15 0.515 0.0562 30.3, 38.1 1.01
MSM/MsJ f 33.5 2.86   11 0.862 0.0854 28.0, 37.9 -0.76
MSM/MsJ m 32.9 1.15   11 0.346 0.0348 31.7, 35.1 -1.34
NOD/ShiLtJ f 32.7 0.598   10 0.189 0.0183 31.7, 33.5 -1.35
NOD/ShiLtJ m 33.7 1.33   10 0.421 0.0394 32.0, 36.8 -0.61
NON/ShiLtJ f 34.1 1.2   10 0.378 0.0351 31.7, 35.7 -0.31
NON/ShiLtJ m 34.3 1.65   10 0.523 0.0483 31.9, 38.1 -0.07
NZB/BlNJ f 38.0 2.03   12 0.585 0.0533 33.4, 39.9 2.58
NZB/BlNJ m 34.2 0.558   9 0.186 0.0163 33.5, 35.2 -0.16
NZW/LacJ f 33.1 0.695   12 0.201 0.021 32.1, 34.2 -1.06
NZW/LacJ m 34.6 0.548   10 0.173 0.0158 33.9, 35.4 0.2
PERA/EiJ f 36.0 1.2   11 0.362 0.0334 34.4, 37.9 1.1
PERA/EiJ m 34.8 1.1   8 0.388 0.0316 33.1, 36.2 0.38
PL/J f 35.6 1.23   16 0.307 0.0345 32.1, 38.1 0.8
PL/J m 35.0 2.08   10 0.656 0.0593 30.5, 36.8 0.56
PWK/PhJ f 34.8 1.14   13 0.316 0.0328 33.2, 37.7 0.21
PWK/PhJ m 33.2 0.555   12 0.16 0.0167 31.7, 33.9 -1.07
RF/J f 33.4 1.97   10 0.622 0.059 30.1, 35.9 -0.83
RF/J m 34.9 1.23   16 0.307 0.0351 33.0, 36.7 0.47
RIIIS/J f 33.6 1.45   9 0.483 0.0431 31.3, 35.0 -0.69
RIIIS/J m 34.0 1.49   15 0.384 0.0437 30.9, 36.0 -0.34
SEA/GnJ f 33.9 0.986   10 0.312 0.0291 32.4, 35.4 -0.46
SEA/GnJ m 34.2 2.16   9 0.72 0.0632 31.8, 39.3 -0.16
SJL/J f 37.3 1.65   7 0.623 0.0442 34.8, 40.3 2.06
SJL/J m 35.2 1.81   14 0.483 0.0514 30.3, 38.2 0.74
SM/J f 33.9 0.833   10 0.263 0.0245 32.2, 34.8 -0.46
SM/J m 34.6 0.826   10 0.261 0.0239 33.1, 35.7 0.2
SPRET/EiJ f 34.5 1.58   11 0.477 0.0459 31.4, 35.9 -0.02
SPRET/EiJ m 33.7 1.86   11 0.562 0.0552 30.3, 35.6 -0.61
SWR/J f 34.1 0.816   13 0.226 0.0239 33.2, 36.2 -0.31
SWR/J m 33.9 1.62   11 0.487 0.0477 32.0, 37.7 -0.43
WSB/EiJ f 35.6 1.52   11 0.457 0.0426 33.5, 39.1 0.8
WSB/EiJ m 35.1 0.94   9 0.313 0.0268 33.9, 36.8 0.65


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 35.3571 0.3892 36.121 34.5933
129S1/SvImJ m 33.7533 0.376 34.4913 33.0154
A/J f 32.24 0.4605 33.1438 31.3362
A/J m 35.57 0.4605 36.4738 34.6662
AKR/J f 34.8 0.4605 35.7038 33.8962
AKR/J m 34.6778 0.4855 35.6305 33.7251
BALB/cByJ f 38.0933 0.376 38.8313 37.3554
BALB/cByJ m 37.0241 0.2704 37.5549 36.4934
BALB/cJ f 34.0273 0.4391 34.889 33.1655
BALB/cJ m 36.56 0.6513 37.8382 35.2818
BTBR T+ Itpr3tf/J f 36.36 0.4605 37.2638 35.4562
BTBR T+ Itpr3tf/J m 35.42 0.4605 36.3238 34.5162
BUB/BnJ f 35.4929 0.3892 36.2567 34.729
BUB/BnJ m 34.32 0.4605 35.2238 33.4162
C3H/HeJ f 32.8 0.4605 33.7038 31.8962
C3H/HeJ m 34.71 0.4605 35.6138 33.8062
C57BL/10J f 34.2095 0.3178 34.8332 33.5858
C57BL/10J m 33.1667 0.376 33.9046 32.4287
C57BL/6J f 33.9364 0.4391 34.7981 33.0746
C57BL/6J m 31.3455 0.4391 32.2072 30.4837
C57BLKS/J f 32.89 0.4605 33.7938 31.9862
C57BLKS/J m 34.14 0.4605 35.0438 33.2362
C57BR/cdJ f 35.32 0.4605 36.2238 34.4162
C57BR/cdJ m 33.9333 0.4204 34.7584 33.1082
C57L/J f 34.7 0.4204 35.5251 33.8749
C57L/J m 32.6067 0.376 33.3446 31.8687
C58/J f 34.61 0.4605 35.5138 33.7062
C58/J m 34.2222 0.4855 35.1749 33.2695
CAST/EiJ f 34.4 0.4204 35.2251 33.5749
CAST/EiJ m 35.8273 0.4391 36.689 34.9655
CBA/J f 33.4111 0.4855 34.3638 32.4584
CBA/J m 34.87 0.4605 35.7738 33.9662
CE/J f 33.5077 0.4039 34.3004 32.715
CE/J m 33.2875 0.5149 34.298 32.277
CZECHII/EiJ f 34.3 0.4391 35.1618 33.4382
CZECHII/EiJ m 34.4364 0.4391 35.2981 33.5746
DBA/1J f 33.0071 0.3892 33.771 32.2433
DBA/1J m 33.7 0.4391 34.5618 32.8382
DBA/2J f 34.4583 0.4204 35.2834 33.6332
DBA/2J m 34.51 0.4605 35.4138 33.6062
FVB/NJ f 34.5833 0.4204 35.4084 33.7582
FVB/NJ m 35.3 0.4204 36.1251 34.4749
I/LnJ f 34.3308 0.4039 35.1235 33.5381
I/LnJ m 35.0143 0.3892 35.7782 34.2504
JF1/MsJ f 35.3083 0.4204 36.1334 34.4832
JF1/MsJ m 34.8563 0.3641 35.5708 34.1417
KK/HlJ f 33.5357 0.3892 34.2996 32.7718
KK/HlJ m 31.6091 0.4391 32.4709 30.7473
LP/J f 33.56 0.376 34.298 32.822
LP/J m 34.53 0.4605 35.4338 33.6262
MA/MyJ f 34.625 0.4204 35.4501 33.7999
MA/MyJ m 35.2385 0.4039 36.0312 34.4457
MOLF/EiJ f 36.6 0.4039 37.3927 35.8073
MOLF/EiJ m 35.4933 0.376 36.2313 34.7554
MSM/MsJ f 33.4545 0.4391 34.3163 32.5928
MSM/MsJ m 32.9455 0.4391 33.8072 32.0837
NOD/ShiLtJ f 32.72 0.4605 33.6238 31.8162
NOD/ShiLtJ m 33.74 0.4605 34.6438 32.8362
NON/ShiLtJ f 34.11 0.4605 35.0138 33.2062
NON/ShiLtJ m 34.27 0.4605 35.1738 33.3662
NZB/BlNJ f 37.975 0.4204 38.8001 37.1499
NZB/BlNJ m 34.2111 0.4855 35.1638 33.2584
NZW/LacJ f 33.1417 0.4204 33.9668 32.3166
NZW/LacJ m 34.65 0.4605 35.5538 33.7462
PERA/EiJ f 35.9909 0.4391 36.8527 35.1291
PERA/EiJ m 34.775 0.5149 35.7855 33.7645
PL/J f 35.5688 0.3641 36.2833 34.8542
PL/J m 34.98 0.4605 35.8838 34.0762
PWK/PhJ f 34.7615 0.4039 35.5543 33.9688
PWK/PhJ m 33.175 0.4204 34.0001 32.3499
RF/J f 33.35 0.4605 34.2538 32.4462
RF/J m 34.9188 0.3641 35.6333 34.2042
RIIIS/J f 33.6333 0.4855 34.5861 32.6806
RIIIS/J m 34.04 0.376 34.778 33.302
SEA/GnJ f 33.92 0.4605 34.8238 33.0162
SEA/GnJ m 34.2 0.4855 35.1527 33.2473
SJL/J f 37.2571 0.5505 38.3374 36.1769
SJL/J m 35.1786 0.3892 35.9425 34.4147
SM/J f 33.94 0.4605 34.8438 33.0362
SM/J m 34.63 0.4605 35.5338 33.7262
SPRET/EiJ f 34.5273 0.4391 35.389 33.6655
SPRET/EiJ m 33.7273 0.4391 34.589 32.8655
SWR/J f 34.0769 0.4039 34.8696 33.2842
SWR/J m 33.8545 0.4391 34.7163 32.9928
WSB/EiJ f 35.6091 0.4391 36.4709 34.7473
WSB/EiJ m 35.0889 0.4855 36.0416 34.1362


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 34.5552 0.2706 35.0863 34.0242
A/J both 33.905 0.3257 34.5441 33.2659
AKR/J both 34.7389 0.3346 35.3955 34.0823
BALB/cByJ both 37.5587 0.2316 38.0132 37.1042
BALB/cJ both 35.2936 0.3927 36.0644 34.5228
BTBR T+ Itpr3tf/J both 35.89 0.3257 36.5291 35.2509
BUB/BnJ both 34.9064 0.3015 35.4981 34.3147
C3H/HeJ both 33.755 0.3257 34.3941 33.1159
C57BL/10J both 33.6881 0.2462 34.1712 33.205
C57BL/6J both 32.6409 0.3105 33.2503 32.0315
C57BLKS/J both 33.515 0.3257 34.1541 32.8759
C57BR/cdJ both 34.6267 0.3118 35.2386 34.0148
C57L/J both 33.6533 0.282 34.2068 33.0999
C58/J both 34.4161 0.3346 35.0727 33.7595
CAST/EiJ both 35.1136 0.304 35.7102 34.5171
CBA/J both 34.1406 0.3346 34.7972 33.4839
CE/J both 33.3976 0.3272 34.0398 32.7554
CZECHII/EiJ both 34.3682 0.3105 34.9775 33.7588
DBA/1J both 33.3536 0.2934 33.9294 32.7778
DBA/2J both 34.4842 0.3118 35.0961 33.8723
FVB/NJ both 34.9417 0.2973 35.5251 34.3582
I/LnJ both 34.6725 0.2805 35.223 34.1221
JF1/MsJ both 35.0823 0.2781 35.628 34.5366
KK/HlJ both 32.5724 0.2934 33.1482 31.9966
LP/J both 34.045 0.2973 34.6284 33.4616
MA/MyJ both 34.9317 0.2915 35.5038 34.3596
MOLF/EiJ both 36.0467 0.2759 36.5882 35.5051
MSM/MsJ both 33.2 0.3105 33.8094 32.5906
NOD/ShiLtJ both 33.23 0.3257 33.8691 32.5909
NON/ShiLtJ both 34.19 0.3257 34.8291 33.5509
NZB/BlNJ both 36.0931 0.3211 36.7232 35.4629
NZW/LacJ both 33.8958 0.3118 34.5077 33.2839
PERA/EiJ both 35.383 0.3384 36.047 34.7189
PL/J both 35.2744 0.2935 35.8505 34.6983
PWK/PhJ both 33.9683 0.2915 34.5404 33.3962
RF/J both 34.1344 0.2935 34.7105 33.5583
RIIIS/J both 33.8367 0.307 34.4392 33.2341
SEA/GnJ both 34.06 0.3346 34.7166 33.4034
SJL/J both 36.2179 0.3371 36.8794 35.5563
SM/J both 34.285 0.3257 34.9241 33.6459
SPRET/EiJ both 34.1273 0.3105 34.7366 33.5179
SWR/J both 33.9657 0.2983 34.5512 33.3803
WSB/EiJ both 35.349 0.3273 35.9913 34.7067




  GWAS USING LINEAR MIXED MODELS