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Project measure / variable:   Peters1   WBC

ID, description, units MPD:6201   WBC   white blood cell count (WBC; per volume x 103)   [n/µL]  
Data set, strains Peters1   inbred w/CC7   43 strains     sex: both     age: 10wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters1 - white blood cell count (WBC; per volume x 103)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested43 strains43 strains
Mean of the strain means7.31   n/µL 7.66   n/µL
Median of the strain means6.89   n/µL 7.16   n/µL
SD of the strain means± 2.37 ± 2.51
Coefficient of variation (CV)0.324 0.327
Min–max range of strain means2.60   –   12.6   n/µL 2.76   –   13.3   n/µL
Mean sample size per strain11.8   mice 11.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 24.5642 24.5642 6.6529 0.0101
strain 42 5098.4394 121.3914 32.8771 < 0.0001
sex:strain 42 569.4597 13.5586 3.6721 < 0.0001
Residuals 921 3400.5898 3.6923


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 8.77 1.84   14 0.492 0.21 5.4, 11.5 0.62
129S1/SvImJ m 8.65 2.69   15 0.693 0.31 5.06, 13.2 0.39
A/J f 4.36 0.775   10 0.245 0.178 3.47, 5.55 -1.24
A/J m 7.74 1.28   10 0.404 0.165 6.15, 10.1 0.03
AKR/J f 5.89 1.09   10 0.346 0.186 4.5, 7.48 -0.6
AKR/J m 7.16 0.834   9 0.278 0.117 5.89, 8.41 -0.2
BALB/cByJ f 9.7 3.04   15 0.786 0.314 6.33, 15.0 1.01
BALB/cByJ m 8.05 1.71   29 0.317 0.212 3.66, 11.7 0.15
BALB/cJ f 6.6 1.75   11 0.528 0.265 4.34, 9.43 -0.3
BALB/cJ m 5.53 1.84   5 0.825 0.333 3.78, 8.41 -0.85
BTBR T+ Itpr3tf/J f 6.78 1.39   10 0.439 0.205 4.9, 9.8 -0.22
BTBR T+ Itpr3tf/J m 9.67 2.11   10 0.668 0.218 7.26, 13.7 0.8
BUB/BnJ f 7.75 2.29   14 0.612 0.296 3.76, 10.9 0.19
BUB/BnJ m 8.44 3.14   10 0.993 0.372 4.71, 13.0 0.31
C3H/HeJ f 5.62 0.929   10 0.294 0.165 4.71, 7.71 -0.71
C3H/HeJ m 5.49 1.91   10 0.604 0.348 2.43, 7.92 -0.87
C57BL/10J f 9.36 2.93   20 0.655 0.313 3.39, 14.4 0.87
C57BL/10J m 11.6 2.13   14 0.57 0.184 7.28, 15.0 1.57
C57BL/6J f 8.01 1.28   11 0.385 0.159 6.69, 10.2 0.3
C57BL/6J m 9.65 1.84   11 0.555 0.191 7.16, 12.7 0.79
C57BLKS/J f 12.6 1.62   10 0.512 0.128 8.41, 14.5 2.23
C57BLKS/J m 10.8 1.4   10 0.442 0.129 8.12, 13.8 1.25
C57BR/cdJ f 7.37 2.49   10 0.788 0.338 5.29, 12.3 0.03
C57BR/cdJ m 9.06 2.07   12 0.598 0.229 5.67, 11.6 0.56
C57L/J f 12.3 3.08   12 0.89 0.25 7.22, 19.0 2.11
C57L/J m 10.7 1.91   15 0.494 0.179 7.92, 13.8 1.21
C58/J f 5.95 0.939   11 0.283 0.158 4.8, 7.45 -0.57
C58/J m 5.24 2.35   9 0.783 0.448 3.28, 10.8 -0.97
CAST/EiJ f 6.89 1.25   12 0.361 0.182 5.17, 8.67 -0.18
CAST/EiJ m 7.05 0.938   11 0.283 0.133 5.5, 8.59 -0.24
CBA/J f 6.48 1.26   9 0.42 0.195 4.44, 8.37 -0.35
CBA/J m 4.47 0.697   10 0.22 0.156 3.56, 5.67 -1.27
CE/J f 9.05 2.04   13 0.567 0.226 5.91, 12.3 0.74
CE/J m 8.23 1.75   8 0.618 0.212 5.9, 11.6 0.23
CZECHII/EiJ f 5.06 1.77   11 0.533 0.349 2.43, 8.34 -0.95
CZECHII/EiJ m 6.83 3.62   11 1.09 0.53 1.45, 11.9 -0.33
DBA/1J f 7.7 0.924   14 0.247 0.12 6.49, 9.1 0.17
DBA/1J m 8.12 2.3   11 0.692 0.283 4.99, 12.2 0.18
DBA/2J f 6.7 1.78   13 0.494 0.266 4.37, 10.6 -0.26
DBA/2J m 9.88 2.31   10 0.732 0.234 6.38, 13.7 0.88
FVB/NJ f 6.48 1.51   12 0.435 0.233 3.09, 8.85 -0.35
FVB/NJ m 5.69 1.44   12 0.416 0.253 2.13, 7.25 -0.79
I/LnJ f 8.33 0.987   13 0.274 0.119 6.5, 10.0 0.43
I/LnJ m 6.96 1.34   14 0.359 0.193 5.53, 9.48 -0.28
JF1/MsJ f 4.91 1.4   12 0.405 0.286 2.66, 6.85 -1.01
JF1/MsJ m 4.32 0.485   16 0.121 0.112 3.69, 5.57 -1.33
KK/HlJ f 7.84 2.42   14 0.646 0.308 4.45, 14.1 0.23
KK/HlJ m 5.19 1.75   11 0.528 0.337 3.21, 8.98 -0.99
LP/J f 9.66 2.7   15 0.698 0.28 5.4, 13.9 0.99
LP/J m 10.1 3.1   10 0.982 0.306 6.49, 15.8 0.97
MA/MyJ f 5.61 1.45   12 0.418 0.259 3.34, 7.56 -0.72
MA/MyJ m 6.11 1.13   13 0.314 0.185 4.63, 8.75 -0.62
MOLF/EiJ f 11.9 2.86   13 0.794 0.24 7.66, 15.5 1.94
MOLF/EiJ m 11.7 2.95   15 0.761 0.251 7.88, 15.8 1.61
MSM/MsJ f 5.34 1.11   11 0.336 0.209 3.57, 7.11 -0.83
MSM/MsJ m 7.98 2.86   11 0.863 0.359 3.73, 14.4 0.13
NOD/ShiLtJ f 5.07 0.677   10 0.214 0.133 4.12, 6.14 -0.94
NOD/ShiLtJ m 5.32 1.2   10 0.378 0.225 3.75, 7.2 -0.93
NON/ShiLtJ f 4.68 0.905   10 0.286 0.193 3.04, 6.44 -1.11
NON/ShiLtJ m 5.92 2.67   10 0.845 0.452 3.1, 12.8 -0.69
NZB/BlNJ f 5.77 1.6   12 0.463 0.278 3.83, 9.04 -0.65
NZB/BlNJ m 3.55 0.778   9 0.259 0.219 2.65, 4.93 -1.64
NZW/LacJ f 11.3 2.92   12 0.842 0.259 8.32, 15.6 1.69
NZW/LacJ m 13.3 3.06   10 0.968 0.23 7.61, 18.2 2.25
PERA/EiJ f 11.1 2.1   11 0.634 0.19 7.39, 14.3 1.6
PERA/EiJ m 11.5 1.79   8 0.633 0.156 9.27, 13.6 1.53
PL/J f 8.42 1.95   16 0.486 0.231 5.87, 12.1 0.47
PL/J m 7.02 0.829   10 0.262 0.118 6.04, 8.88 -0.26
PWK/PhJ f 5.94 1.48   13 0.412 0.25 3.35, 8.3 -0.58
PWK/PhJ m 6.36 0.797   12 0.23 0.125 4.95, 7.29 -0.52
RF/J f 7.17 1.32   10 0.418 0.184 5.78, 9.86 -0.06
RF/J m 9.47 1.64   16 0.411 0.174 7.35, 12.3 0.72
RIIIS/J f 4.76 1.07   11 0.322 0.224 3.46, 7.45 -1.07
RIIIS/J m 5.35 1.24   16 0.309 0.231 3.65, 7.7 -0.92
SEA/GnJ f 7.34 1.89   10 0.598 0.258 5.38, 10.5 0.01
SEA/GnJ m 6.92 1.25   9 0.416 0.18 4.95, 8.8 -0.3
SJL/J f 8.44 2.64   8 0.932 0.312 3.08, 12.2 0.48
SJL/J m 9.96 2.18   14 0.582 0.219 6.35, 14.7 0.92
SM/J f 3.25 0.764   10 0.242 0.235 2.4, 4.94 -1.71
SM/J m 2.76 0.947   10 0.299 0.343 1.67, 5.01 -1.95
SPRET/EiJ f 5.51 0.751   11 0.227 0.136 4.55, 6.8 -0.76
SPRET/EiJ m 6.33 0.519   11 0.156 0.0819 5.48, 7.0 -0.53
SWR/J f 9.77 2.23   13 0.618 0.228 6.69, 13.0 1.04
SWR/J m 11.2 2.75   11 0.831 0.245 6.78, 14.3 1.41
WSB/EiJ f 2.6 0.655   11 0.197 0.252 1.74, 4.11 -1.99
WSB/EiJ m 4.1 1.94   9 0.646 0.472 2.61, 7.72 -1.42


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 8.7671 0.5136 9.775 7.7593
129S1/SvImJ m 8.6527 0.4961 9.6264 7.679
A/J f 4.357 0.6076 5.5495 3.1645
A/J m 7.738 0.6076 8.9305 6.5455
AKR/J f 5.891 0.6076 7.0835 4.6985
AKR/J m 7.1567 0.6405 8.4137 5.8996
BALB/cByJ f 9.702 0.4961 10.6757 8.7283
BALB/cByJ m 8.0538 0.3568 8.7541 7.3535
BALB/cJ f 6.6027 0.5794 7.7398 5.4657
BALB/cJ m 5.53 0.8593 7.2165 3.8435
BTBR T+ Itpr3tf/J f 6.785 0.6076 7.9775 5.5925
BTBR T+ Itpr3tf/J m 9.671 0.6076 10.8635 8.4785
BUB/BnJ f 7.7521 0.5136 8.76 6.7443
BUB/BnJ m 8.445 0.6076 9.6375 7.2525
C3H/HeJ f 5.619 0.6076 6.8115 4.4265
C3H/HeJ m 5.487 0.6076 6.6795 4.2945
C57BL/10J f 9.363 0.4297 10.2062 8.5198
C57BL/10J m 11.5736 0.5136 12.5814 10.5657
C57BL/6J f 8.0109 0.5794 9.1479 6.8739
C57BL/6J m 9.6473 0.5794 10.7843 8.5102
C57BLKS/J f 12.621 0.6076 13.8135 11.4285
C57BLKS/J m 10.832 0.6076 12.0245 9.6395
C57BR/cdJ f 7.373 0.6076 8.5655 6.1805
C57BR/cdJ m 9.0625 0.5547 10.1511 7.9739
C57L/J f 12.3292 0.5547 13.4178 11.2405
C57L/J m 10.6707 0.4961 11.6444 9.697
C58/J f 5.9518 0.5794 7.0888 4.8148
C58/J m 5.2444 0.6405 6.5015 3.9874
CAST/EiJ f 6.8933 0.5547 7.982 5.8047
CAST/EiJ m 7.0482 0.5794 8.1852 5.9112
CBA/J f 6.4789 0.6405 7.7359 5.2219
CBA/J m 4.472 0.6076 5.6645 3.2795
CE/J f 9.0538 0.5329 10.0998 8.0079
CE/J m 8.2275 0.6794 9.5608 6.8942
CZECHII/EiJ f 5.0645 0.5794 6.2016 3.9275
CZECHII/EiJ m 6.8255 0.5794 7.9625 5.6884
DBA/1J f 7.6957 0.5136 8.7036 6.6878
DBA/1J m 8.1182 0.5794 9.2552 6.9812
DBA/2J f 6.6954 0.5329 7.7413 5.6495
DBA/2J m 9.876 0.6076 11.0685 8.6835
FVB/NJ f 6.4817 0.5547 7.5703 5.393
FVB/NJ m 5.6908 0.5547 6.7795 4.6022
I/LnJ f 8.3269 0.5329 9.3728 7.281
I/LnJ m 6.9564 0.5136 7.9643 5.9486
JF1/MsJ f 4.9058 0.5547 5.9945 3.8172
JF1/MsJ m 4.3244 0.4804 5.2671 3.3816
KK/HlJ f 7.84 0.5136 8.8479 6.8321
KK/HlJ m 5.1945 0.5794 6.3316 4.0575
LP/J f 9.658 0.4961 10.6317 8.6843
LP/J m 10.142 0.6076 11.3345 8.9495
MA/MyJ f 5.6075 0.5547 6.6961 4.5189
MA/MyJ m 6.1115 0.5329 7.1574 5.0656
MOLF/EiJ f 11.9023 0.5329 12.9482 10.8564
MOLF/EiJ m 11.7213 0.4961 12.695 10.7476
MSM/MsJ f 5.3364 0.5794 6.4734 4.1993
MSM/MsJ m 7.9773 0.5794 9.1143 6.8402
NOD/ShiLtJ f 5.072 0.6076 6.2645 3.8795
NOD/ShiLtJ m 5.32 0.6076 6.5125 4.1275
NON/ShiLtJ f 4.677 0.6076 5.8695 3.4845
NON/ShiLtJ m 5.917 0.6076 7.1095 4.7245
NZB/BlNJ f 5.77 0.5547 6.8586 4.6814
NZB/BlNJ m 3.55 0.6405 4.807 2.293
NZW/LacJ f 11.2575 0.5547 12.3461 10.1689
NZW/LacJ m 13.328 0.6076 14.5205 12.1355
PERA/EiJ f 11.0791 0.5794 12.2161 9.9421
PERA/EiJ m 11.5025 0.6794 12.8358 10.1692
PL/J f 8.4175 0.4804 9.3603 7.4747
PL/J m 7.022 0.6076 8.2145 5.8295
PWK/PhJ f 5.9446 0.5329 6.9905 4.8987
PWK/PhJ m 6.3583 0.5547 7.447 5.2697
RF/J f 7.171 0.6076 8.3635 5.9785
RF/J m 9.4712 0.4804 10.414 8.5285
RIIIS/J f 4.7582 0.5794 5.8952 3.6212
RIIIS/J m 5.3469 0.4804 6.2896 4.4041
SEA/GnJ f 7.339 0.6076 8.5315 6.1465
SEA/GnJ m 6.9233 0.6405 8.1804 5.6663
SJL/J f 8.44 0.6794 9.7733 7.1067
SJL/J m 9.9557 0.5136 10.9636 8.9478
SM/J f 3.245 0.6076 4.4375 2.0525
SM/J m 2.759 0.6076 3.9515 1.5665
SPRET/EiJ f 5.5109 0.5794 6.6479 4.3739
SPRET/EiJ m 6.3309 0.5794 7.4679 5.1939
SWR/J f 9.7669 0.5329 10.8128 8.721
SWR/J m 11.2436 0.5794 12.3807 10.1066
WSB/EiJ f 2.6009 0.5794 3.7379 1.4639
WSB/EiJ m 4.1044 0.6405 5.3615 2.8474


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 8.7099 0.357 9.4106 8.0092
A/J both 6.0475 0.4297 6.8907 5.2043
AKR/J both 6.5238 0.4414 7.3902 5.6575
BALB/cByJ both 8.8779 0.3056 9.4776 8.2782
BALB/cJ both 6.0664 0.5182 7.0834 5.0494
BTBR T+ Itpr3tf/J both 8.228 0.4297 9.0712 7.3848
BUB/BnJ both 8.0986 0.3978 8.8793 7.3179
C3H/HeJ both 5.553 0.4297 6.3962 4.7098
C57BL/10J both 10.4683 0.3348 11.1253 9.8112
C57BL/6J both 8.8291 0.4097 9.6331 8.0251
C57BLKS/J both 11.7265 0.4297 12.5697 10.8833
C57BR/cdJ both 8.2178 0.4114 9.0251 7.4104
C57L/J both 11.4999 0.3721 12.2302 10.7696
C58/J both 5.5981 0.4318 6.4456 4.7506
CAST/EiJ both 6.9708 0.401 7.7578 6.1837
CBA/J both 5.4754 0.4414 6.3418 4.6091
CE/J both 8.6407 0.4317 9.488 7.7934
CZECHII/EiJ both 5.945 0.4097 6.749 5.141
DBA/1J both 7.9069 0.3871 8.6667 7.1472
DBA/2J both 8.2857 0.4041 9.0788 7.4926
FVB/NJ both 6.0863 0.3922 6.856 5.3165
I/LnJ both 7.6417 0.3701 8.3679 6.9154
JF1/MsJ both 4.6151 0.3669 5.3352 3.8951
KK/HlJ both 6.5173 0.3871 7.277 5.7576
LP/J both 9.9 0.3922 10.6698 9.1302
MA/MyJ both 5.8595 0.3846 6.6143 5.1047
MOLF/EiJ both 11.8118 0.3641 12.5263 11.0973
MSM/MsJ both 6.6568 0.4097 7.4608 5.8528
NOD/ShiLtJ both 5.196 0.4297 6.0392 4.3528
NON/ShiLtJ both 5.297 0.4297 6.1402 4.4538
NZB/BlNJ both 4.66 0.4237 5.4914 3.8286
NZW/LacJ both 12.2928 0.4114 13.1001 11.4854
PERA/EiJ both 11.2908 0.4464 12.1669 10.4147
PL/J both 7.7198 0.3873 8.4798 6.9597
PWK/PhJ both 6.1515 0.3846 6.9063 5.3967
RF/J both 8.3211 0.3873 9.0812 7.561
RIIIS/J both 5.0525 0.3763 5.791 4.314
SEA/GnJ both 7.1312 0.4414 7.9975 6.2648
SJL/J both 9.1979 0.4258 10.0335 8.3622
SM/J both 3.002 0.4297 3.8452 2.1588
SPRET/EiJ both 5.9209 0.4097 6.7249 5.1169
SWR/J both 10.5053 0.3936 11.2777 9.7328
WSB/EiJ both 3.3527 0.4318 4.2002 2.5052




  GWAS USING LINEAR MIXED MODELS