Project measure / variable:   Schoenrock1   LD_dist_dk_ME

ID, description, units MPD:61240   LD_dist_dk_ME   distance traveled in dark side, 10 min test   [cm]  methyl-enriched diet  
various diets study
Data set, strains Schoenrock1   CC RIX   18 strains     sex: f     age: 8-9wks
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  STRAIN COMPARISON PLOT
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Schoenrock1 - distance traveled in dark side, 10 min test methyl-enriched diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested18 strains
Mean of the strain means1469   cm
Median of the strain means1503   cm
SD of the strain means± 460
Coefficient of variation (CV)0.313
Min–max range of strain means574   –   2104   cm
Mean sample size per strain9.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 17 34381139.2606 2022419.9565 10.8465 < 0.0001
Residuals 158 29460390.4894 186458.1677


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 1296.0 351.0   12 101.0 0.27 445.0, 1598.0 -0.38
RIX:CC(003 x 014) f 2104.0 438.0   3 253.0 0.208 1733.0, 2588.0 1.38
RIX:CC(004 x 017) f 1884.0 256.0   6 104.0 0.136 1497.0, 2290.0 0.9
RIX:CC(005 x 040) f 1760.0 572.0   24 117.0 0.325 244.0, 2962.0 0.63
RIX:CC(006 x 026) f 1544.0 221.0   5 98.7 0.143 1190.0, 1789.0 0.16
RIX:CC(011 x 001) f 1300.0 182.0   14 48.6 0.14 990.0, 1619.0 -0.37
RIX:CC(014 x 003) f 1978.0 979.0   4 490.0 0.495 1342.0, 3424.0 1.1
RIX:CC(017 x 004) f 1950.0 616.0   2   435.0 0.316 1514.0, 2385.0 1.04
RIX:CC(023 x 047) f 1049.0 760.0   9 253.0 0.724 89.8, 2239.0 -0.91
RIX:CC(026 x 006) f 1567.0 298.0   5 133.0 0.19 1135.0, 1961.0 0.21
RIX:CC(032 x 042) f 1308.0 314.0   19 72.1 0.24 725.0, 1930.0 -0.35
RIX:CC(035 x 062) f 2043.0 6.65   2   4.7 0.00325 2038.0, 2047.0 1.25
RIX:CC(040 x 005) f 1259.0 587.0   15 151.0 0.466 -0.46
RIX:CC(041 x 051) f 574.0 250.0   24 51.1 0.436 0.9, 978.0 -1.95
RIX:CC(042 x 032) f 1462.0 294.0   9 97.9 0.201 1018.0, 1913.0 -0.02
RIX:CC(047 x 023) f 1043.0 444.0   4 222.0 0.426 393.0, 1356.0 -0.93
RIX:CC(051 x 041) f 602.0 170.0   12 49.2 0.283 340.0, 941.0 -1.88
RIX:CC(062 x 035) f 1727.0 482.0   7 182.0 0.279 1019.0, 2410.0 0.56


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 1296.2333 124.6522 1542.433 1050.0337
RIX:CC(003 x 014) f 2104.4667 249.3045 2596.866 1612.0674
RIX:CC(004 x 017) f 1883.9333 176.2849 2232.1122 1535.7545
RIX:CC(005 x 040) f 1760.4208 88.1424 1934.5103 1586.3314
RIX:CC(006 x 026) f 1543.76 193.1104 1925.1709 1162.3491
RIX:CC(011 x 001) f 1300.1929 115.4055 1528.1294 1072.2563
RIX:CC(014 x 003) f 1977.525 215.904 2403.9553 1551.0947
RIX:CC(017 x 004) f 1949.55 305.3344 2552.6135 1346.4865
RIX:CC(023 x 047) f 1049.2667 143.936 1333.5535 764.9798
RIX:CC(026 x 006) f 1567.16 193.1104 1948.5709 1185.7491
RIX:CC(032 x 042) f 1308.4947 99.0636 1504.1544 1112.8351
RIX:CC(035 x 062) f 2042.7 305.3344 2645.7635 1439.6365
RIX:CC(040 x 005) f 1258.5533 111.4924 1478.761 1038.3457
RIX:CC(041 x 051) f 573.7208 88.1424 747.8103 399.6314
RIX:CC(042 x 032) f 1461.6 143.936 1745.8869 1177.3131
RIX:CC(047 x 023) f 1043.325 215.904 1469.7553 616.8947
RIX:CC(051 x 041) f 602.3583 124.6522 848.558 356.1587
RIX:CC(062 x 035) f 1727.1714 163.2081 2049.5224 1404.8204




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA