Project measure / variable:   Schoenrock1   LD_trans_PD

ID, description, units MPD:61235   LD_trans_PD   number of transitions between light and dark sides, 10 min test   [n]  protein-deficient diet  
various diets study
Data set, strains Schoenrock1   CC RIX   18 strains     sex: f     age: 8-9wks
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  STRAIN COMPARISON PLOT
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Schoenrock1 - number of transitions between light and dark sides, 10 min test protein-deficient diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested18 strains
Mean of the strain means74.6   n
Median of the strain means69.3   n
SD of the strain means± 37.8
Coefficient of variation (CV)0.507
Min–max range of strain means13.6   –   161   n
Mean sample size per strain8.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 15 257139.0272 17142.6018 15.3794 < 0.0001
Residuals 140 156050.4087 1114.6458


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 38.6 18.4   19 4.21 0.476 7.0, 73.0 -0.95
RIX:CC(003 x 014) f 58.8 39.8   4 19.9 0.677 1.0, 89.0 -0.42
RIX:CC(004 x 017) f 147.0 27.7   12 8.01 0.189 105.0, 193.0 1.91
RIX:CC(005 x 040) f 79.4 40.1   14 10.7 0.504 1.0, 131.0 0.13
RIX:CC(006 x 026) f 94.8 22.0   6 9.0 0.233 70.0, 126.0 0.53
RIX:CC(011 x 001) f 54.6 50.8   12 14.7 0.931 10.0, 204.0 -0.53
RIX:CC(014 x 003) f 74.0 0.0   1   0.0 0.0 74.0, 74.0 -0.02
RIX:CC(017 x 004) f 161.0 45.4   9 15.1 0.282 89.0, 217.0 2.28
RIX:CC(023 x 047) f 55.7 31.0   10 9.8 0.557 9.0, 114.0 -0.5
RIX:CC(026 x 006) f 67.7 40.4   6 16.5 0.597 4.0, 116.0 -0.18
RIX:CC(032 x 042) f 78.7 29.4   7 11.1 0.374 28.0, 111.0 0.11
RIX:CC(035 x 062) f 71.0 0.0   1   0.0 0.0 71.0, 71.0 -0.1
RIX:CC(040 x 005) f 51.7 45.5   16 11.4 0.88 1.0, 132.0 -0.61
RIX:CC(041 x 051) f 29.7 29.1   12 8.4 0.981 1.0, 105.0 -1.19
RIX:CC(042 x 032) f 108.0 23.4   6 9.57 0.217 73.0, 135.0 0.88
RIX:CC(047 x 023) f 53.3 7.76   6 3.17 0.146 42.0, 64.0 -0.56
RIX:CC(051 x 041) f 13.6 11.3   13 3.13 0.829 1.0, 33.0 -1.61
RIX:CC(062 x 035) f 106.0 23.1   4 11.5 0.217 86.0, 138.0 0.83


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 38.5789 7.6593 53.7219 23.436
RIX:CC(003 x 014) f 58.75 16.6932 91.7533 25.7467
RIX:CC(004 x 017) f 147.0 9.6378 166.0544 127.9456
RIX:CC(005 x 040) f 79.4286 8.9229 97.0696 61.7876
RIX:CC(006 x 026) f 94.8333 13.6299 121.7804 67.8863
RIX:CC(011 x 001) f 54.5833 9.6378 73.6378 35.5289
RIX:CC(017 x 004) f 161.1111 11.1288 183.1133 139.1089
RIX:CC(023 x 047) f 55.7 10.5577 76.5731 34.8269
RIX:CC(026 x 006) f 67.6667 13.6299 94.6137 40.7196
RIX:CC(032 x 042) f 78.7143 12.6188 103.6624 53.7662
RIX:CC(040 x 005) f 51.6875 8.3466 68.1891 35.1859
RIX:CC(041 x 051) f 29.6667 9.6378 48.7211 10.6122
RIX:CC(042 x 032) f 107.8333 13.6299 134.7804 80.8863
RIX:CC(047 x 023) f 53.3333 13.6299 80.2804 26.3863
RIX:CC(051 x 041) f 13.6154 9.2597 31.9223 0.0
RIX:CC(062 x 035) f 106.25 16.6932 139.2533 73.2467




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA