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Project measure / variable:   Schoenrock1   LD_boli_ME

ID, description, units MPD:61232   LD_boli_ME   number of fecal boli, 10 min test   [n]  methyl-enriched diet  
various diets study
Data set, strains Schoenrock1   CC RIX   18 strains     sex: f     age: 8-9wks
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  STRAIN COMPARISON PLOT
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Schoenrock1 - number of fecal boli, 10 min test methyl-enriched diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested18 strains
Mean of the strain means2.04   n
Median of the strain means1.83   n
SD of the strain means± 1.58
Coefficient of variation (CV)0.778
Min–max range of strain means0   –   6.75   n
Mean sample size per strain9.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 17 248.6793 14.6282 3.6213 < 0.0001
Residuals 159 642.2812 4.0395


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 1.54 1.33   13 0.369 0.865 -0.31
RIX:CC(003 x 014) f 0.0 0.0   3 0.0 0.0 -1.29
RIX:CC(004 x 017) f 2.67 3.78   6 1.54 1.42 0.4
RIX:CC(005 x 040) f 1.17 1.93   24 0.393 1.65 -0.55
RIX:CC(006 x 026) f 0.4 0.894   5 0.4 2.24 -1.03
RIX:CC(011 x 001) f 2.71 1.68   14 0.45 0.62 0.42
RIX:CC(014 x 003) f 2.0 2.45   4 1.22 1.22 -0.02
RIX:CC(017 x 004) f 0.5 0.707   2   0.5 1.41 -0.97
RIX:CC(023 x 047) f 3.22 2.33   9 0.778 0.724 0.75
RIX:CC(026 x 006) f 0.0 0.0   5 0.0 0.0 -1.29
RIX:CC(032 x 042) f 1.63 1.83   19 0.42 1.12 -0.26
RIX:CC(035 x 062) f 2.5 3.54   2   2.5 1.41 0.29
RIX:CC(040 x 005) f 1.4 2.16   15 0.559 1.55 -0.4
RIX:CC(041 x 051) f 3.33 2.39   24 0.488 0.717 0.82
RIX:CC(042 x 032) f 1.67 1.41   9 0.471 0.849 -0.23
RIX:CC(047 x 023) f 6.75 1.71   4 0.854 0.253 5.0, 9.0 2.97
RIX:CC(051 x 041) f 3.17 1.8   12 0.52 0.569 0.72
RIX:CC(062 x 035) f 2.0 2.31   7 0.873 1.15 -0.02


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 1.5385 0.5574 2.6394 0.4375
RIX:CC(003 x 014) f 0.0 1.1604 2.2918 -2.2918
RIX:CC(004 x 017) f 2.6667 0.8205 4.2872 1.0461
RIX:CC(005 x 040) f 1.1667 0.4103 1.9769 0.3564
RIX:CC(006 x 026) f 0.4 0.8988 2.1752 -1.3752
RIX:CC(011 x 001) f 2.7143 0.5372 3.7752 1.6534
RIX:CC(014 x 003) f 2.0 1.0049 3.9847 0.0153
RIX:CC(017 x 004) f 0.5 1.4212 3.3068 -2.3068
RIX:CC(023 x 047) f 3.2222 0.67 4.5454 1.8991
RIX:CC(026 x 006) f 0.0 0.8988 1.7752 -1.7752
RIX:CC(032 x 042) f 1.6316 0.4611 2.5422 0.7209
RIX:CC(035 x 062) f 2.5 1.4212 5.3068 -0.3068
RIX:CC(040 x 005) f 1.4 0.5189 2.4249 0.3751
RIX:CC(041 x 051) f 3.3333 0.4103 4.1436 2.5231
RIX:CC(042 x 032) f 1.6667 0.67 2.9898 0.3435
RIX:CC(047 x 023) f 6.75 1.0049 8.7347 4.7653
RIX:CC(051 x 041) f 3.1667 0.5802 4.3125 2.0208
RIX:CC(062 x 035) f 2.0 0.7597 3.5003 0.4997




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA