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Project measure / variable:   Tordoff1   NH4Cl_pref30

ID, description, units MPD:6123   NH4Cl_pref30   preference for NH4Cl (ammonium chloride) solutions   [%]  concentration 30 mM  
Data set, strains Tordoff1   inbred   28 strains     sex: m     age: 4-12wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff1 - preference for NH4Cl (ammonium chloride) solutions concentration 30 mM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means38.3   %
Median of the strain means40.5   %
SD of the strain means± 11.3
Coefficient of variation (CV)0.295
Min–max range of strain means6.37   –   56.6   %
Mean sample size per strain11.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 40685.5302 1506.8715 4.6538 < 0.0001
Residuals 293 94872.0352 323.7953


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 55.0 15.1   12 4.37 0.275 36.4, 82.7 1.48
A/J m 46.4 19.5   12 5.62 0.419 7.1, 84.0 0.72
AKR/J m 24.4 18.4   12 5.3 0.752 3.4, 53.5 -1.23
BALB/cByJ m 37.8 21.5   12 6.21 0.569 6.3, 83.8 -0.04
BUB/BnJ m 41.6 12.9   7 4.88 0.311 23.6, 57.6 0.3
C3H/HeJ m 39.6 17.4   12 5.04 0.441 5.1, 77.5 0.12
C57BL/6J m 49.5 16.7   12 4.81 0.337 13.7, 73.5 1.0
C57L/J m 43.8 9.01   11 2.72 0.206 30.2, 61.9 0.49
CAST/EiJ m 39.0 18.1   12 5.23 0.465 2.0, 63.2 0.07
CBA/J m 45.7 21.2   12 6.13 0.464 8.3, 73.5 0.66
CE/J m 34.5 28.0   12 8.08 0.812 5.5, 85.9 -0.33
DBA/2J m 52.4 13.3   12 3.83 0.253 30.8, 68.6 1.25
FVB/NJ m 26.1 17.2   12 4.97 0.66 4.3, 54.8 -1.08
I/LnJ m 28.8 12.1   11 3.66 0.422 10.4, 43.1 -0.84
KK/HlJ m 32.4 16.6   6 6.77 0.512 5.7, 54.3 -0.52
LP/J m 56.6 20.9   12 6.04 0.37 22.2, 96.5 1.63
NOD/ShiLtJ m 41.3 11.5   12 3.32 0.279 12.1, 61.7 0.27
NZB/BlNJ m 48.4 8.86   12 2.56 0.183 33.3, 61.0 0.9
P/J m 28.4 13.6   12 3.93 0.48 5.3, 51.7 -0.87
PL/J m 45.2 14.6   12 4.22 0.323 20.8, 74.5 0.61
RBF/DnJ m 46.3 14.8   12 4.27 0.32 20.8, 70.7 0.71
RF/J m 31.9 25.9   12 7.46 0.811 4.8, 72.6 -0.56
RIIIS/J m 42.9 28.9   11 8.72 0.675 8.3, 88.4 0.41
SEA/GnJ m 23.1 17.9   12 5.18 0.776 3.7, 48.9 -1.34
SJL/J m 24.9 16.0   11 4.81 0.64 2.0, 48.8 -1.18
SM/J m 35.1 27.0   12 7.78 0.767 2.0, 97.4 -0.28
SPRET/EiJ m 6.37 4.12   12 1.19 0.647 2.2, 14.6 -2.83
SWR/J m 43.9 13.5   12 3.89 0.307 17.9, 65.2 0.5


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 54.9917 5.1945 65.2149 44.7684
A/J m 46.425 5.1945 56.6483 36.2017
AKR/J m 24.425 5.1945 34.6483 14.2017
BALB/cByJ m 37.8333 5.1945 48.0566 27.6101
BUB/BnJ m 41.6143 6.8012 54.9997 28.2289
C3H/HeJ m 39.6 5.1945 49.8233 29.3767
C57BL/6J m 49.4917 5.1945 59.7149 39.2684
C57L/J m 43.8 5.4255 54.4779 33.1221
CAST/EiJ m 38.975 5.1945 49.1983 28.7517
CBA/J m 45.7417 5.1945 55.9649 35.5184
CE/J m 34.4667 5.1945 44.6899 24.2434
DBA/2J m 52.45 5.1945 62.6733 42.2267
FVB/NJ m 26.0833 5.1945 36.3066 15.8601
I/LnJ m 28.7545 5.4255 39.4324 18.0767
KK/HlJ m 32.3833 7.3461 46.8412 17.9254
LP/J m 56.5833 5.1945 66.8066 46.3601
NOD/ShiLtJ m 41.2917 5.1945 51.5149 31.0684
NZB/BlNJ m 48.4167 5.1945 58.6399 38.1934
P/J m 28.3667 5.1945 38.5899 18.1434
PL/J m 45.2 5.1945 55.4233 34.9767
RBF/DnJ m 46.325 5.1945 56.5483 36.1017
RF/J m 31.8917 5.1945 42.1149 21.6684
RIIIS/J m 42.8545 5.4255 53.5324 32.1767
SEA/GnJ m 23.1167 5.1945 33.3399 12.8934
SJL/J m 24.9364 5.4255 35.6142 14.2585
SM/J m 35.1417 5.1945 45.3649 24.9184
SPRET/EiJ m 6.3667 5.1945 16.5899 0.0
SWR/J m 43.85 5.1945 54.0733 33.6267




  GWAS USING LINEAR MIXED MODELS