Project measure / variable:   Schoenrock1   OF_center_VDD

ID, description, units MPD:61229   OF_center_VDD   percentage of time in center of arena, 10 min test   [%]  vitamin D-deficient diet  
various diets study
Data set, strains Schoenrock1   CC RIX   16 strains     sex: f     age: 8-9wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Schoenrock1 - percentage of time in center of arena, 10 min test vitamin D-deficient diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested16 strains
Mean of the strain means6.94   %
Median of the strain means6.01   %
SD of the strain means± 4.42
Coefficient of variation (CV)0.637
Min–max range of strain means0.694   –   16.7   %
Mean sample size per strain11.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 15 3987.6419 265.8428 12.4483 < 0.0001
Residuals 164 3502.3351 21.3557


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 4.21 3.26   20 0.729 0.775 0.2, 10.6 -0.62
RIX:CC(003 x 014) f 9.74 9.24   9 3.08 0.949 0.63
RIX:CC(004 x 017) f 16.7 3.9   14 1.04 0.234 10.2, 24.2 2.21
RIX:CC(006 x 026) f 7.94 3.12   9 1.04 0.393 2.2, 11.9 0.23
RIX:CC(011 x 001) f 3.42 2.79   11 0.842 0.816 0.02, 8.72 -0.8
RIX:CC(014 x 003) f 4.82 3.47   6 1.42 0.721 2.27, 10.7 -0.48
RIX:CC(017 x 004) f 11.9 6.53   13 1.81 0.547 2.32, 27.0 1.12
RIX:CC(023 x 047) f 12.3 9.79   8 3.46 0.796 4.33, 35.5 1.21
RIX:CC(026 x 006) f 5.44 3.15   14 0.843 0.579 0.08, 10.7 -0.34
RIX:CC(032 x 042) f 10.9 5.53   19 1.27 0.508 0.8, 22.8 0.9
RIX:CC(035 x 062) f 3.75 4.77   5 2.13 1.27 0.45, 12.0 -0.72
RIX:CC(041 x 051) f 0.805 0.814   20 0.182 1.01 -1.39
RIX:CC(042 x 032) f 6.57 4.59   6 1.87 0.699 0.32, 11.8 -0.08
RIX:CC(047 x 023) f 7.26 4.18   6 1.71 0.575 2.63, 13.8 0.07
RIX:CC(051 x 041) f 0.694 0.678   14 0.181 0.978 -1.41
RIX:CC(062 x 035) f 4.52 2.75   6 1.12 0.609 1.32, 8.97 -0.55


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 4.209 1.0333 6.2494 2.1686
RIX:CC(003 x 014) f 9.7356 1.5404 12.7771 6.694
RIX:CC(004 x 017) f 16.6871 1.2351 19.1258 14.2484
RIX:CC(006 x 026) f 7.9444 1.5404 10.986 4.9029
RIX:CC(011 x 001) f 3.4236 1.3934 6.1749 0.6724
RIX:CC(014 x 003) f 4.8167 1.8866 8.5418 1.0915
RIX:CC(017 x 004) f 11.9346 1.2817 14.4654 9.4039
RIX:CC(023 x 047) f 12.29 1.6338 15.5161 9.0639
RIX:CC(026 x 006) f 5.4443 1.2351 7.883 3.0056
RIX:CC(032 x 042) f 10.8863 1.0602 12.9797 8.793
RIX:CC(035 x 062) f 3.748 2.0667 7.8287 0.0
RIX:CC(041 x 051) f 0.8055 1.0333 2.8459 0.0
RIX:CC(042 x 032) f 6.565 1.8866 10.2902 2.8398
RIX:CC(047 x 023) f 7.2617 1.8866 10.9868 3.5365
RIX:CC(051 x 041) f 0.6936 1.2351 3.1323 0.0
RIX:CC(062 x 035) f 4.515 1.8866 8.2402 0.7898




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA