Project measure / variable:   Schoenrock1   OF_center_PD

ID, description, units MPD:61227   OF_center_PD   percentage of time in center of arena, 10 min test   [%]  protein-deficient diet  
various diets study
Data set, strains Schoenrock1   CC RIX   18 strains     sex: f     age: 8-9wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Schoenrock1 - percentage of time in center of arena, 10 min test protein-deficient diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested18 strains
Mean of the strain means7.10   %
Median of the strain means5.75   %
SD of the strain means± 4.24
Coefficient of variation (CV)0.597
Min–max range of strain means0.750   –   15.2   %
Mean sample size per strain8.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 15 2619.4916 174.6328 7.8254 < 0.0001
Residuals 133 2968.037 22.3161


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 4.45 3.96   17 0.961 0.891 0.08, 12.7 -0.62
RIX:CC(003 x 014) f 4.38 7.26   4 3.63 1.66 0.02, 15.2 -0.64
RIX:CC(004 x 017) f 15.2 4.63   12 1.34 0.305 7.92, 23.2 1.91
RIX:CC(005 x 040) f 6.11 5.25   14 1.4 0.859 0.33, 17.2 -0.23
RIX:CC(006 x 026) f 9.71 3.89   6 1.59 0.401 4.78, 16.6 0.62
RIX:CC(011 x 001) f 5.07 3.15   11 0.95 0.621 1.55, 12.2 -0.48
RIX:CC(014 x 003) f 0.75 0.0   1   0.0 0.0 0.75, 0.75 -1.5
RIX:CC(017 x 004) f 14.2 3.0   9 0.999 0.211 11.2, 21.0 1.68
RIX:CC(023 x 047) f 8.89 7.14   7 2.7 0.803 0.2, 21.4 0.42
RIX:CC(026 x 006) f 5.35 3.15   6 1.29 0.589 1.07, 10.2 -0.41
RIX:CC(032 x 042) f 10.9 6.34   7 2.39 0.583 4.02, 20.4 0.9
RIX:CC(035 x 062) f 5.38 0.0   1   0.0 0.0 5.38, 5.38 -0.41
RIX:CC(040 x 005) f 4.14 5.78   16 1.44 1.39 0.12, 18.1 -0.7
RIX:CC(041 x 051) f 2.05 1.11   12 0.321 0.543 0.67, 4.37 -1.19
RIX:CC(042 x 032) f 8.18 4.18   6 1.71 0.512 2.55, 12.8 0.26
RIX:CC(047 x 023) f 9.24 9.39   5 4.2 1.02 2.02, 23.0 0.51
RIX:CC(051 x 041) f 1.46 1.63   13 0.451 1.11 0.23, 5.77 -1.33
RIX:CC(062 x 035) f 12.3 6.74   4 3.37 0.547 5.98, 19.4 1.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 4.4488 1.1457 6.715 2.1826
RIX:CC(003 x 014) f 4.38 2.362 9.0519 0.0
RIX:CC(004 x 017) f 15.195 1.3637 17.8923 12.4977
RIX:CC(005 x 040) f 6.1064 1.2625 8.6037 3.6092
RIX:CC(006 x 026) f 9.7067 1.9286 13.5213 5.892
RIX:CC(011 x 001) f 5.0727 1.4243 7.89 2.2554
RIX:CC(017 x 004) f 14.1889 1.5747 17.3035 11.0743
RIX:CC(023 x 047) f 8.8929 1.7855 12.4245 5.3612
RIX:CC(026 x 006) f 5.35 1.9286 9.1646 1.5354
RIX:CC(032 x 042) f 10.86 1.7855 14.3916 7.3284
RIX:CC(040 x 005) f 4.1438 1.181 6.4797 1.8078
RIX:CC(041 x 051) f 2.0508 1.3637 4.7482 0.0
RIX:CC(042 x 032) f 8.1767 1.9286 11.9913 4.362
RIX:CC(047 x 023) f 9.24 2.1126 13.4187 5.0613
RIX:CC(051 x 041) f 1.4585 1.3102 4.05 0.0
RIX:CC(062 x 035) f 12.32 2.362 16.9919 7.6481




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA